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FlyBase Report
Annotation of Gene cin

Summary: Gene cin (CG2945 ,FBgn0000316) is located on X and has a length of 3519 nt on the genomic sequence. The cytologic location is 1A1 . The physical map boundaries are X:111,774..115,292. This gene has transcripts (and associated proteins): cin-RA (cin-PA), cin-RB (cin-PB), . The peptide validation status for the annotation of this gene is: --

Symbol cin
Annotation ID CG2945
Physical map X: 111,774..115,292
Cytogenetic map X: 1A1
Scaffold AE003417
Gene region length 3519 nt
Closest relatives InParanoid computed Orthology_Calls
Gene ID FBgn0000316
Feedback Fix annotation error
Cytoband:1A1 X:1..166952 Cytoband:1A2 X:166952..181001 Gene:SP71 X:63574..87173 Gene:CG2995 X:102829..110847 Gene:cin X:111774..115292 Gene:CG3777 X:136525..207026 Gene:CG3038 X:100872..102664 Gene:CG13377 X:115155..120817 Gene:CG13376 X:123067..123648 Gene:ewg X:125343..136456 Gene model for cin
Gene region map (GBrowse)
Sequence:
in format:
for
Source: Release 4.3 Annotated Genome Sequence (Notes)
Available reports
Genome AnnotationSee also  Synopsis  |   Abridged report  |   Full report
Map locations  |   Gene Ontology  |   Similar genes & Sequences (73)  |   Synonyms (6)
Synonymsl(1)G0142;    fs(1)M50;    l(1)1Ae;    EG:BACR37P7.3
Secondary IDsFBan0002945, FBgn0026665
Annotation notescomment=DGC clone GH09380 appears problematic: represents a rare alternative transcript.
Gene Ontology associations proteolysis;    Mo-molybdopterin cofactor biosynthesis;    embryonic development (sensu Insecta);    cysteine-type endopeptidase activity;    pteridine and derivative metabolism
DGC cDNA GH09380
EST EK185562;  EP05718;  EK108203;  EK245548;  EK204154;  EK256536;  EK222046;  EK117428;  EK113007;  EK161134;  EK259755;  AT12845;  EK169546;  LD39954;  RE02056;  RE50474;  RE73764;  LD03207;  LD47852;  RE71641;  LD06372;  LD46526;  RE08509;  LD14588;  RE71642;  RE72730;  RE23878;  RE51247;  RE15103;  LD22107;  RE48937;  RE72525;  LD22617;  LD40205;  RE33629;  RE39963;  RE03576;  RE67435;  LD13071;  RE24061;  LD10865;  RE41991;  RE26852;  RE14303;  RE71435;  RE15720;  RE50837;  RE21975;  RE49347;  RE70182;  RE19907;  RE25619;  RE19989;  RE66625;  GH09380;  RE30076;  RE11076;  RE59268;  RE39219
Affy Oligo 152241_at

Gene Annotation & Evidence
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