GADR { RETE|ID 1 FBan0017018 GID 1 FBgn0039972 GSYM 1 CG17018 CGSYM 1 CG17018 ARM 1 2L CLOC 1 40F7-40F7 SCAF 1 AE002603 TRREC 3 AALEN 3 1305 ID|FBan0017018 SYM|CG17018 GENSR { GSYM|CG17018 ID|FBgn0039972 } ARM|2L SCAF|AE002603 BLOC|22299524..22356369 CLOCC|40F7-40F7 SQLEN|56846 ID2|FBan0017018 |FBgn0039971 |FBgn0063679 SYN|CG17410 |BcDNA:RE40762 EST|SD03440 |SD24486 |EK042044 |EK141239 |EK052947 |EK188354 |EK176906 |EK064428 |EK039363 |SD21404 |EK230961 |EK169545 |EK169510 |EK072002 |BQ103048 |EK041648 |EP03607 |EP09128 |EP03016 |EP10521 |CK02585 |EP08352 |EK195030 |EP08623 |EK198061 |EK007048 |EK087243 |EK116942 |EK116949 |EK117713 |EK117909 |EK117949 |BQ103507 |EK139760 |EK116033 |EK220013 |EK222330 |EK259847 |EK052651 |EK133654 |BQ102861 |EK033624 |EK070046 |EK066727 |EK168948 |RE19520 |RE62937 |RE62337 |RE40762 |RH50636 |GH10793 |RH66770 |RH40157 |RH74432 |RH62583 |LD26456 |LD13621 |RE74586 |RE68421 |RE65970 |RE65951 |RE65465 |RE61489 |RE60843 |RE53116 |RE50459 |RE48594 |RE48520 |RE43013 |RE40035 |EK178448 |EK233449 |EK175027 |EK094021 |EK248917 |RE38144 |EK249955 |RE34215 |GM04977 |RE17980 |RE05593 |RE04907 |RE34808 CDNA|RE34808 |RE40762 AFFY|144927_s_at CMT|comment=Transposon inserted in intron DT|20031201 TRREC { NAM|CG17018-RD SYN|FlyBase:FBtr0085958 |FlyBase:FBpp0085311 |GB_protein:AAN10334.1 |GB_protein:AAN10334.2 AANAM|CG17018-PD SQLEN|4464 AALEN|1305 BLOC|join(22299524..22299631,22342405..22342562,22351023..22351887, |22352786..22352917,22352970..22354766,22354829..22355090,22355159..22355769, |22355839..22356369) CDS|join(22342510..22342562,22351023..22351887,22352786..22352917, |22352970..22354766,22354829..22355090,22355159..22355769,22355839..22356033) CMT|protein_id=AAN10334 |validation_flag=transposon in gene |comment=Only one EST supports this alternative transcript DT|20020802 } TRREC { NAM|CG17018-RC SYN|FlyBase:FBtr0085957 |FlyBase:FBpp0085310 |GB_protein:AAN10333.2 |GB_protein:AAN10333.1 AANAM|CG17018-PC SQLEN|4391 AALEN|1294 BLOC|join(22299524..22299631,22313355..22313439,22351023..22351887, |22352786..22352917,22352970..22354766,22354829..22355090,22355159..22355769, |22355839..22356369) CDS|join(22313420..22313439,22351023..22351887,22352786..22352917, |22352970..22354766,22354829..22355090,22355159..22355769,22355839..22356033) CMT|protein_id=AAN10333 |validation_flag=transposon in gene DT|20020802 } TRREC { NAM|CG17018-RA SYN|FlyBase:FBtr0085956 |FlyBase:FBpp0085309 |GB_protein:AAF45346.2 |FlyBase:FBgn0074301 |FlyBase Annotation IDs:GA14273 |Dpse\GA14273 AANAM|CG17018-PA SQLEN|4306 AALEN|1272 BLOC|join(22299524..22299631,22351023..22351887,22352786..22352917, |22352970..22354766,22354829..22355090,22355159..22355769,22355839..22356369) CDS|join(22351069..22351887,22352786..22352917,22352970..22354766, |22354829..22355090,22355159..22355769,22355839..22356033) CMT|protein_id=AAF45346 |validation_flag=transposon in gene |comment=Only one EST supports this alternative transcript |comment=Range of putative ortholog from tblastn was extended to cover the gene prediction |comment=within this sequence range, | at least part of the putative ortholog of the D. melanogaster |gene CG17018 lives DT|20020802 } EVD { PRG|bdgp_unknown_clonelocator DB|scaffoldBACs CLA|BAC DT|20041221 DBX|BDGP:D1058 , BACR13E23 BLOC|22196026..22372418 } EVD { PRG|blastx_masked DB|aa_SPTR.othinv CLA|protein DT|20041008 DBX|Q7Q3D5 BLOC|join(22352783..22352917,22352970..22354595,22354674..22354763) } EVD { PRG|sim4 DB|na_gadfly.dros.RELEASE2 CLA|mRNA DT|20041008 DBX|CT37790.2 BLOC|22351018..22351914 } EVD { PRG|repeatmasker DB|dummy CLA|RepeatMasker:dummy DT|20041008 DBX|nnnnnnnn BLOC|22301908..22302401 DBX|U66884 BLOC|22302561..22302632 DBX|U66884 BLOC|22302835..22302871 DBX|AF492763 BLOC|22303266..22305748 DBX|U66884 BLOC|22309586..22309769 DBX|nnnnnnnn BLOC|22310449..22310663 DBX|AF043638 BLOC|22311992..22312090 DBX|U66884 BLOC|22313609..22313966 DBX|nnnnnnnn BLOC|22315178..22315274 DBX|nnnnnnnn BLOC|22316817..22316855 DBX|nnnnnnnn BLOC|22322043..22322749 DBX|nnnnnnnn BLOC|22322847..22323567 DBX|nnnnnnnn BLOC|22323694..22323945 DBX|nnnnnnnn BLOC|22325324..22325481 DBX|nnnnnnnn BLOC|22328923..22328976 DBX|nnnnnnnn BLOC|22330348..22330560 DBX|nnnnnnnn BLOC|22330567..22330746 DBX|D83207 BLOC|22331392..22331514 DBX|AF237761 BLOC|22334286..22335795 DBX|U66884 BLOC|22339952..22340158 DBX|nnnnnnnn BLOC|22341018..22341173 DBX|nnnnnnnn BLOC|22341180..22341336 DBX|nnnnnnnn BLOC|22341347..22341445 DBX|AJ009736 BLOC|22343476..22344009 } EVD { PRG|dmel_r3_to_dmel_r4_migration DB|dmel_r3_affy_oligos CLA|oligonucleotide DT|20050125 DBX|144927_s_at_855 BLOC|22335379..22335403 DBX|144927_s_at_861 BLOC|22335385..22335409 } EVD { PRG|tblastx_masked DB|na_dbEST.insect CLA|EST DBX|BM599872 BLOC|22353987..22354595 DBX|BM636294 BLOC|22328449..22328700 DBX|CK519419 BLOC|22308264..22308659 DBX|CK524453 BLOC|22308264..22308659 DBX|CK559481 BLOC|22353591..22354214 DBX|BM599872 BLOC|22353615..22353863 DBX|CK529802 BLOC|22308327..22308659 DBX|CK559481 BLOC|22354056..22354469 } EVD { PRG|tblastxwrap_masked DB|na_scf_chunk_agambiae.fa CLA|DNA DT|20041008 DBX|AAAB01008964.1p110 BLOC|22351720..22351890 DBX|AAAB01008964.1p110 BLOC|22352765..22352917 DBX|AAAB01008964.1p110 BLOC|22352970..22353482 DBX|AAAB01008964.1p110 BLOC|22353597..22354007 DBX|AAAB01008964.1p110 BLOC|22354023..22354265 DBX|AAAB01008964.1p110 BLOC|22354263..22354595 } EVD { PRG|sim4 DB|na_dbEST.same.dmel CLA|EST DBX|RE19520.5prime BLOC|22354104..22354665 DBX|RE62937.5prime BLOC|join(22352901..22352917,22352970..22353608) DBX|RE62337.5prime BLOC|join(22352901..22352917,22352970..22353479) DBX|RE40762:contig2 BLOC|join(22355720..22355769,22355839..22356369) DBX|RE40762:contig1 BLOC|join(22352863..22352917,22352970..22353488) DBX|RH50636.5prime BLOC|join(22335784..22335826,22366091..22366526) DBX|GH10793.3prime BLOC|join(22334916..22335001,22335112..22335340,22335366..22335473) DBX|RH66770.5prime BLOC|22325997..22326548 DBX|RH40157.5prime BLOC|join(22317685..22317939,22317964..22318284) DBX|RH74432.5prime BLOC|join(22317666..22317939,22317964..22318284) DBX|RH62583.5prime BLOC|join(22311551..22311852,22377922..22378135,22378170..22378200) DBX|LD26456.5prime BLOC|join(22299547..22299631,22351023..22351661) DBX|LD13621.5prime BLOC|join(22299544..22299631,22351023..22351462) DBX|RE74586.5prime BLOC|join(22299525..22299631,22351023..22351607) DBX|RE68421.5prime BLOC|join(22299525..22299631,22351023..22351600) DBX|RE65970.5prime BLOC|join(22299525..22299631,22351023..22351472) DBX|RE65951.5prime BLOC|join(22299525..22299631,22313355..22313439,22351023..22351435) DBX|RE65465.5prime BLOC|join(22299525..22299631,22351023..22351145) DBX|RE61489.5prime BLOC|join(22299525..22299631,22342405..22342562,22351023..22351351) DBX|RE60843.5prime BLOC|join(22299525..22299631,22351023..22351474) DBX|RE53116.5prime BLOC|join(22299525..22299631,22351023..22351630) DBX|RE50459.5prime BLOC|join(22299525..22299631,22351023..22351422) DBX|RE48594.5prime BLOC|join(22299525..22299631,22351023..22351427) DBX|RE48520.5prime BLOC|join(22299525..22299631,22351023..22351257) DBX|RE43013.5prime BLOC|join(22299525..22299631,22351023..22351564) DBX|RE40035.5prime BLOC|join(22299525..22299631,22351023..22351397) DBX|RE38144.5prime BLOC|join(22299525..22299631,22351023..22351459) DBX|RE34215.5prime BLOC|join(22299525..22299631,22313355..22313439,22351023..22351461) DBX|RE17980.5prime BLOC|join(22299525..22299631,22351023..22351559) DBX|RE05593.5prime BLOC|join(22299525..22299631,22351023..22351370) DBX|RE04907.5prime BLOC|join(22299525..22299631,22351023..22351467) DBX|RE34808:contig1 BLOC|join(22299524..22299631,22351023..22351579) DBX|RE34808:contig2 BLOC|join(22355723..22355769,22355839..22356367) } EVD { PRG|sim4 DB|na_transcript.dmel.RELEASE32 CLA|mRNA DT|20041008 DBX|CG17018-RA.32 BLOC|join(22299524..22299631,22351023..22351887,22352786..22352917, |22352970..22354766,22354829..22355090,22355159..22355769,22355839..22356369) DBX|CG17018-RC.32 BLOC|join(22299524..22299631,22313355..22313439,22351023..22351887, |22352786..22352917,22352970..22354766,22354829..22355090,22355159..22355769, |22355839..22356369) DBX|CG17018-RD.32 BLOC|join(22299524..22299631,22342405..22342562,22351023..22351887, |22352786..22352917,22352970..22354766,22354829..22355090,22355159..22355769, |22355839..22356369) } EVD { PRG|sim4 DB|na_transcript.dmel.RELEASE31 CLA|mRNA DT|20041008 DBX|TE20452-RA_ODDcomp_forward.31 BLOC|join(22326004..22326118,22326138..22326374,22326408..22326605, |22326620..22327056) DBX|TE19507-RA_ODDcomp_forward.31 BLOC|join(22326005..22326118,22326138..22326374,22326408..22326605, |22326620..22327056) DBX|TE19502-RA_ODDcomp_forward.31 BLOC|join(22326005..22327059,22337602..22337638) DBX|TE19518-RA_ODDcomp_forward.31 BLOC|join(22326004..22326534,22326594..22327044) DBX|CG17018-RD.31 BLOC|join(22299524..22299631,22342405..22342562,22351023..22351887, |22352786..22352917,22352970..22354766,22354829..22355090,22355159..22355769, |22355839..22356369) DBX|CG17018-RC.31 BLOC|join(22299524..22299631,22313355..22313439,22351023..22351887, |22352786..22352917,22352970..22354766,22354829..22355090,22355159..22355769, |22355839..22356369) DBX|TE20446-RA.31 BLOC|22326260..22327059 DBX|TE20400-RA_ODDcomp_forward.31 BLOC|join(22326574..22326878,22326921..22327057,22327074..22327109) DBX|CG17018-RA.31 BLOC|join(22299524..22299631,22351023..22351887,22352786..22352917, |22352970..22354766,22354829..22355090,22355159..22355769,22355839..22356369) } EVD { PRG|sim4tandem DB|na_gb.dmel CLA|cDNA DT|20050822 DBX|RE40762 BLOC|join(22352863..22352917,22352970..22354766,22354829..22355090, |22355159..22355769,22355839..22356369) } EVD { PRG|genscan_masked DB|dummy CLA|genscan_masked DT|20041008 BLOC|22331708..22331998 BLOC|join(22338276..22338452,22344863..22345162) BLOC|join(22351069..22351887,22352786..22352917,22352970..22354574, |22354829..22355090,22355159..22355769,22355839..22356036) } EVD { PRG|sim4 DB|na_gb.tpa.dmel CLA|so DT|20041008 DBX|BK003603.1 BLOC|22328208..22330900 } EVD { PRG|blastx_masked DB|aa_SPTR.insect CLA|protein DT|20041008 DBX|Q7PCT0 BLOC|22308333..22308617 } EVD { PRG|prosplign DB|aa_ncbi_dmel CLA|protein DT|20060123 DBX|AAX33431 BLOC|join(22351069..22351887,22352786..22352917,22352970..22354766, |22354829..22355090,22355159..22355769,22355839..22356033) } EVD { PRG|blastx_masked DB|aa_SPTR.rodent CLA|protein DT|20041008 DBX|Q8VIG2 BLOC|join(22352801..22352917,22352970..22354496) } EVD { PRG|tblastxwrap_masked DB|na_baylorf1_scfchunk.dpse CLA|so DT|20041008 DBX|Dpf1glom13-1 BLOC|22308459..22308587 DBX|Dpf1glom23-1 BLOC|22308459..22308605 DBX|Dpf1glom8-1 BLOC|22308459..22308626 DBX|Dpf1glom18-1 BLOC|22308459..22308626 DBX|Dpf1glom15-1 BLOC|22308459..22308626 DBX|Contig4703_Contig6221-1 BLOC|22308459..22308626 DBX|Dpf1glom25-1 BLOC|22308459..22308626 DBX|Contig3286_Contig7811B.fa-1 BLOC|22308465..22308614 DBX|Contig3311_Contig5832-1 BLOC|22308465..22308626 DBX|Dpf1glom11-1 BLOC|22308465..22308626 DBX|Contig3681_Contig434-10 BLOC|22314985..22315104 DBX|Contig6581_Contig6381-1 BLOC|22328676..22328882 DBX|Contig6581_Contig6381-7 BLOC|22337985..22338110 DBX|Contig1348_Contig852-1 BLOC|22337985..22338143 DBX|Dpf1glom5-1 BLOC|22337985..22338146 DBX|Dpf1glom14-1 BLOC|22337985..22338146 DBX|Contig7857_Contig6881-1 BLOC|22337985..22338146 DBX|Dpf1glom25-1 BLOC|22337988..22338146 DBX|Dpf1glom25-1 BLOC|22338204..22338302 DBX|Contig4339_Contig5121-1 BLOC|22338204..22338320 DBX|Dpf1glom11-1 BLOC|22338204..22338341 DBX|Dpf1glom12-1 BLOC|22338213..22338308 DBX|Contig5247_Contig4716-1 BLOC|22338213..22338341 DBX|Dpf1glom19-1 BLOC|22338213..22338341 DBX|Contig7059_Contig2327-1 BLOC|22351687..22351890 DBX|Contig7059_Contig2327-1 BLOC|22352783..22352920 DBX|Contig7059_Contig2327-1 BLOC|22352970..22353503 DBX|Contig7059_Contig2327-1 BLOC|22353480..22354610 DBX|Contig7059_Contig2327-1 BLOC|22354826..22355095 DBX|Contig7059_Contig2327-1 BLOC|22355482..22355607 DBX|Contig7059_Contig2327-1 BLOC|22355896..22356033 } EVD { PRG|sim4 DB|na_dbEST.diff.dmel CLA|EST DBX|SD03440.5prime BLOC|join(22341948..22341994,22342059..22342540) DBX|SD24486.5prime BLOC|join(22341940..22341994,22342059..22342295) DBX|EK042044.5prime BLOC|22326674..22326894 DBX|EK141239.5prime BLOC|join(22326628..22327057,22327071..22327119) DBX|EK052947.5prime BLOC|join(22326376..22326583,22336563..22336829) DBX|EK188354.5prime BLOC|22326329..22326794 DBX|EK176906.5prime BLOC|22326329..22326788 DBX|EK064428.5prime BLOC|22326254..22326828 DBX|EK039363.5prime BLOC|22326254..22326755 DBX|SD21404.5prime BLOC|22326208..22326948 DBX|EK230961.5prime BLOC|22319328..22319678 DBX|EK169545.5prime BLOC|22319128..22319590 DBX|EK169510.5prime BLOC|22319128..22319590 DBX|EK072002.5prime BLOC|join(22313405..22313439,22351023..22351422) DBX|BQ103048 BLOC|join(22299527..22299631,22351023..22351469) DBX|EK041648.5prime BLOC|join(22299524..22299631,22313355..22313439,22351023..22351218) DBX|EP03607.3prime BLOC|22355956..22356351 DBX|EP09128.3prime BLOC|22326515..22326965 DBX|EP03016.3prime BLOC|22326450..22326965 DBX|EP10521.3prime BLOC|22326156..22326679 DBX|CK02585.3prime BLOC|22325999..22326539 DBX|EP08352.3prime BLOC|22319125..22319592 DBX|EK195030.5prime BLOC|22353156..22353488 DBX|EP08623.3prime BLOC|join(22354508..22354766,22354829..22355043) DBX|EK198061.5prime BLOC|join(22354830..22355090,22355159..22355304) DBX|EK007048.5prime BLOC|join(22354914..22355090,22355159..22355365) DBX|EK087243.5prime BLOC|join(22354914..22355090,22355159..22355382) DBX|EK116942.5prime BLOC|22355210..22355705 DBX|EK116949.5prime BLOC|22355210..22355384 DBX|EK117713.5prime BLOC|22355210..22355710 DBX|EK117909.5prime BLOC|22355210..22355698 DBX|EK117949.5prime BLOC|22355210..22355382 DBX|BQ103507 BLOC|join(22355304..22355769,22355839..22355911) DBX|EK139760.5prime BLOC|join(22355562..22355769,22355839..22355897) DBX|EK116033.5prime BLOC|join(22355604..22355769,22355839..22356139) DBX|EK220013.5prime BLOC|join(22355628..22355769,22355839..22356176) DBX|EK222330.5prime BLOC|join(22355628..22355769,22355839..22356192) DBX|EK259847.5prime BLOC|join(22355727..22355769,22355839..22356238) DBX|EK052651.5prime BLOC|22355839..22356250 DBX|EK133654.5prime BLOC|22355839..22356317 DBX|BQ102861 BLOC|22355849..22356205 DBX|EK033624.5prime BLOC|22355915..22356281 DBX|EK070046.5prime BLOC|22355915..22356315 DBX|EK066727.5prime BLOC|22355931..22356278 DBX|EK168948.5prime BLOC|22355954..22356344 DBX|EK178448.5prime BLOC|22353072..22353526 DBX|EK233449.5prime BLOC|22352994..22353287 DBX|EK175027.5prime BLOC|join(22351822..22351887,22352786..22352917,22352970..22353211) DBX|EK094021.5prime BLOC|22356037..22356349 DBX|EK248917.5prime BLOC|22351341..22351840 DBX|EK249955.5prime BLOC|22351332..22351770 DBX|GM04977:contig1 BLOC|22345121..22345807 DBX|GM04977:contig2 BLOC|22346194..22346844 } EVD { PRG|blastx_masked DB|aa_SPTR.dmel CLA|protein DT|20041008 DBX|Q8SXS3 BLOC|join(22352994..22354769,22354826..22355089,22355158..22355769, |22355839..22356033) DBX|Q9W5Y4 BLOC|join(22351069..22351911,22352786..22352917,22352970..22354769, |22354826..22355089,22355158..22355769,22355839..22356033) DBX|Q8IH60 BLOC|join(22308360..22308659,22337662..22337742,22337985..22338134) DBX|Q8MRT3 BLOC|join(22308264..22308659,22337665..22337751,22337967..22338134) DBX|Q8IN94 BLOC|join(22328215..22328673,22328631..22328882) DBX|Q9V9N2 BLOC|22328203..22328346 DBX|Q8MNR4 BLOC|join(22308360..22308659,22337662..22337742,22337985..22338134) } EVD { PRG|splign DB|na_cDNA_ncbi CLA|cDNA DT|20050907 DBX|RE34808 BLOC|join(22299525..22299631,22351023..22351887,22352786..22352917, |22352970..22354766,22354829..22355090,22355159..22355769,22355839..22356368) } EVD { PRG|blastx_masked DB|aa_SPTR.primate CLA|protein DT|20041008 DBX|Q9Y4F3 BLOC|join(22352783..22352917,22352970..22354496) DBX|Q9Y4J9 BLOC|22353360..22354496 } EVD { PRG|promoter DB|dummy CLA|promoter DT|20041008 BLOC|22356279..22356280 BLOC|22327081..22327082 BLOC|22330572..22330573 BLOC|22337183..22337184 BLOC|22339759..22339760 BLOC|22341914..22341915 BLOC|22344193..22344194 BLOC|22348914..22348915 BLOC|22351116..22351117 BLOC|22352744..22352745 } VERS|4.3 } # EOR GADR { RETE|ID 1 FBan0009578 GID 1 FBgn0031094 GSYM 1 CG9578 CGSYM 1 CG9578 ARM 1 X CLOC 1 19C1-19C1 SCAF 1 AE002611 TRREC 1 AALEN 1 272 ID|FBan0009578 SYM|CG9578 GENSR { GSYM|CG9578 ID|FBgn0031094 } ARM|X SCAF|AE002611 BLOC|20003924..20005211 CLOCC|19C1-19C1 SQLEN|1288 ID2|FBan0009578 EST|EK305639 |SD16362 |UT01448 |SD12739 |GM09431 |GM01369 |LP05350 |HL08141 |LP09080 |GH27896 |EK156927 |EK277851 |EK272260 |EK195737 |EK294147 CDNA|HL08141 AFFY|153439_at DT|20040816 TRREC { NAM|CG9578-RA SYN|FlyBase:FBtr0070008 |FlyBase:FBpp0070007 |GB_protein:AAF45376.2 |FlyBase:FBgn0081873 |FlyBase Annotation IDs:GA21888 |Dpse\GA21888 AANAM|CG9578-PA SQLEN|1077 AALEN|272 BLOC|join(20003924..20004045,20004106..20004440,20004528..20004747, |20004812..20005211) CDS|join(20004031..20004045,20004106..20004440,20004528..20004747, |20004812..20005057) CMT|comment=Range of putative ortholog from tblastn was extended |to cover the gene prediction DT|20020704 } EVD { PRG|bdgp_unknown_clonelocator DB|scaffoldBACs CLA|BAC DT|20041221 DBX|GB:AC018491 , BACR11H15 BLOC|19831670..20009622 } EVD { PRG|blastx_masked DB|aa_SPTR.othinv CLA|protein DT|20041008 DBX|Q7RYL9 BLOC|join(20004274..20004747,20004812..20004949) DBX|AAO47348 BLOC|join(20004292..20004441,20004526..20004783) } EVD { PRG|sim4 DB|na_gadfly.dros.RELEASE2 CLA|mRNA DT|20041008 DBX|CT17528.2 BLOC|join(20003928..20004045,20004106..20004440,20004528..20004747, |20004812..20005060) } EVD { PRG|genie_masked DB|dummy CLA|genie_masked DT|20041008 BLOC|join(20004031..20004045,20004106..20004440,20004528..20004747, |20004812..20005060) } EVD { PRG|dmel_r3_to_dmel_r4_migration DB|dmel_r3_affy_oligos CLA|oligonucleotide DT|20050125 DBX|153439_at_521 BLOC|20004583..20004607 DBX|153439_at_531 BLOC|20004593..20004617 DBX|153439_at_577 BLOC|20004639..20004663 DBX|153439_at_591 BLOC|20004653..20004677 DBX|153439_at_600 BLOC|20004662..20004686 DBX|153439_at_653 BLOC|20004715..20004739 DBX|153439_at_694 BLOC|20004820..20004844 DBX|153439_at_747 BLOC|20004873..20004897 DBX|153439_at_769 BLOC|20004895..20004919 DBX|153439_at_801 BLOC|20004927..20004951 DBX|153439_at_821 BLOC|20004947..20004971 DBX|153439_at_1003 BLOC|20005129..20005153 DBX|153439_at_1022 BLOC|20005148..20005172 DBX|153439_at_495 BLOC|20004557..20004581 } EVD { PRG|tblastx_masked DB|na_dbEST.insect CLA|EST DBX|BX609654 BLOC|join(20004118..20004441,20004540..20004605,20004547..20004681) DBX|BM605588 BLOC|join(20004118..20004441,20004547..20004705) DBX|BX617934 BLOC|join(20004118..20004441,20004547..20004747) } EVD { PRG|tblastxwrap_masked DB|na_scf_chunk_agambiae.fa CLA|DNA DT|20041008 DBX|AAAB01008859.1p64 BLOC|20004223..20004441 DBX|AAAB01008859.1p64 BLOC|20004547..20004747 DBX|AAAB01008859.1p64 BLOC|20004812..20004973 } EVD { PRG|sim4 DB|na_dbEST.same.dmel CLA|EST DBX|LP05350.5prime BLOC|join(20003928..20004045,20004106..20004607) DBX|HL08141:contig1 BLOC|join(20003973..20004045,20004106..20004440,20004528..20004638) DBX|HL08141:contig2 BLOC|join(20004680..20004747,20004812..20005208) DBX|LP09080.5prime BLOC|join(20003985..20004045,20004106..20004440,20004528..20004747, |20004812..20004835) DBX|GH27896.5prime BLOC|join(20004020..20004045,20004106..20004440,20004528..20004747, |20004812..20004893) } EVD { PRG|prosplign DB|aa_ncbi_other CLA|protein DT|20060124 DBX|NP_001026970 BLOC|join(20004010..20004051,20004148..20004198,20004274..20004440, |20004528..20004747) } EVD { PRG|sim4 DB|na_transcript.dmel.RELEASE32 CLA|mRNA DT|20041008 DBX|CG9578-RA.32 BLOC|join(20003924..20004045,20004106..20004440,20004528..20004747, |20004812..20005211) } EVD { PRG|sim4 DB|na_transcript.dmel.RELEASE31 CLA|mRNA DT|20041008 DBX|CG9578-RA.31 BLOC|join(20003924..20004045,20004106..20004440,20004528..20004747, |20004812..20005211) } EVD { PRG|genscan_masked DB|dummy CLA|genscan_masked DT|20041008 BLOC|join(20004037..20004440,20004528..20004747,20004812..20005060) } EVD { PRG|sim4tandem DB|na_gb.dmel CLA|cDNA DT|20050823 DBX|HL08141 BLOC|join(20003972..20004045,20004106..20004440,20004528..20004747, |20004812..20005209) } EVD { PRG|blastx_masked DB|aa_SPTR.insect CLA|protein DT|20041008 DBX|Q7PQX2 BLOC|join(20004118..20004441,20004547..20004747,20004812..20005048) } EVD { PRG|blastx_masked DB|aa_SPTR.rodent CLA|protein DT|20041008 DBX|Q8BH58 BLOC|join(20004274..20004441,20004544..20004747,20004812..20005054) DBX|AAH58250 BLOC|join(20004274..20004441,20004544..20004747,20004812..20005054) } EVD { PRG|augustus DB|dummy CLA|augustus DT|20050713 BLOC|join(20004031..20004045,20004106..20004440,20004528..20004747, |20004812..20005060) } EVD { PRG|tblastxwrap_masked DB|na_baylorf1_scfchunk.dpse CLA|so DT|20041008 DBX|Contig2105_Contig7229-3 BLOC|20004103..20004450 DBX|Contig2105_Contig7229-3 BLOC|20004523..20004753 DBX|Contig2105_Contig7229-3 BLOC|20004809..20005054 } EVD { PRG|blastx_masked DB|aa_SPTR.othvert CLA|protein DT|20041008 DBX|AAH57515 BLOC|join(20004250..20004441,20004547..20004747,20004812..20005054) } EVD { PRG|blastx_masked DB|aa_SPTR.dmel CLA|protein DT|20041008 DBX|Q9W5W6 BLOC|join(20004103..20004441,20004529..20004747,20004812..20005057) } EVD { PRG|sim4 DB|na_dbEST.diff.dmel CLA|EST DBX|EK305639.5prime BLOC|join(20003913..20004045,20004106..20004440,20004528..20004608) DBX|SD16362.5prime BLOC|join(20003924..20004045,20004106..20004440,20004528..20004747, |20004812..20004845) DBX|UT01448:contig1 BLOC|join(20003942..20004045,20004106..20004440,20004527..20004748, |20004812..20005208) DBX|SD12739.5prime BLOC|join(20003944..20004045,20004106..20004440,20004528..20004747, |20004812..20004894) DBX|GM09431.5prime BLOC|join(20003965..20004045,20004106..20004440,20004528..20004720) DBX|GM01369.5prime BLOC|join(20003976..20004045,20004106..20004440,20004528..20004747) DBX|EK156927.5prime BLOC|join(20003905..20004045,20004106..20004440,20004528..20004578) DBX|EK277851.5prime BLOC|join(20003906..20004045,20004106..20004165) DBX|EK272260.5prime BLOC|join(20003906..20004045,20004106..20004356) DBX|EK195737.5prime BLOC|join(20003911..20004045,20004106..20004440) DBX|EK294147.5prime BLOC|join(20003911..20004045,20004106..20004440,20004528..20004702) } EVD { PRG|blastx_masked DB|aa_SPTR.plant CLA|protein DT|20041008 DBX|Q94HA2 BLOC|20004262..20004747 DBX|Q8VXY4 BLOC|join(20004262..20004747,20004812..20005048) DBX|Q9SYZ2 BLOC|20004812..20005048 } EVD { PRG|blastx_masked DB|aa_SPTR.primate CLA|protein DT|20041008 DBX|Q8IZ86 BLOC|join(20004274..20004441,20004544..20004747) DBX|O75663 BLOC|join(20004274..20004441,20004544..20004747,20004812..20005054) } EVD { PRG|blastx_masked DB|aa_SPTR.yeast CLA|protein DT|20041008 DBX|Q12199 BLOC|join(20004289..20004747,20004812..20004934) } VERS|4.3 } # EOR GADR { RETE|ID 1 FBan0015323 GID 1 FBgn0040784 GSYM 1 CG15323 CGSYM 1 CG15323 ARM 1 X CLOC 1 19B1-19B1 SCAF 1 AE002611 TRREC 1 AALEN 1 97 ID|FBan0015323 SYM|CG15323 GENSR { GSYM|CG15323 ID|FBgn0040784 } ARM|X SCAF|AE002611 BLOC|complement(19944120..19944413) CLOCC|19B1-19B1 SQLEN|294 ID2|FBan0015323 EST|EC33424 AFFY|151256_at DT|20031201 TRREC { NAM|CG15323-RA SYN|FlyBase:FBtr0070031 |FlyBase:FBpp0070030 |GB_protein:AAF45379.1 AANAM|CG15323-PA SQLEN|294 (-) AALEN|97 BLOC|complement(19944120..19944413) CDS|complement(19944123..19944413) DT|20020704 } EVD { PRG|sim4 DB|na_transcript.dmel.RELEASE31 CLA|mRNA DT|20041008 DBX|CG15323-RA.31 BLOC|complement(19944120..19944413) } EVD { PRG|genscan_masked DB|dummy CLA|genscan_masked DT|20041008 BLOC|complement(19944120..19944446,19946508..19946757,19950495..19950551, |19952416..19952550,19953369..19953498,19954978..19955128) } EVD { PRG|sim4 DB|na_gadfly.dros.RELEASE2 CLA|mRNA DT|20041008 DBX|CT35314.2 BLOC|complement(19944120..19944413) } EVD { PRG|genie_masked DB|dummy CLA|genie_masked DT|20041008 BLOC|complement(19944120..19944413) } EVD { PRG|augustus DB|dummy CLA|augustus DT|20050713 BLOC|complement(19944120..19944413) } EVD { PRG|sim4 DB|na_transcript.dmel.RELEASE32 CLA|mRNA DT|20041008 DBX|CG15323-RA.32 BLOC|complement(19944120..19944413) } EVD { PRG|blastx_masked DB|aa_SPTR.dmel CLA|protein DT|20041008 DBX|Q9W5X4 BLOC|complement(19944123..19944413) } EVD { PRG|sim4 DB|na_dbEST.diff.dmel CLA|EST DBX|EC33424.5prime BLOC|complement(19944046..19944417) } EVD { PRG|dmel_r3_to_dmel_r4_migration DB|dmel_r3_affy_oligos CLA|oligonucleotide DT|20050125 DBX|151256_at_189 BLOC|complement(19944213..19944237) DBX|151256_at_29 BLOC|complement(19944373..19944397) DBX|151256_at_167 BLOC|complement(19944235..19944259) DBX|151256_at_155 BLOC|complement(19944247..19944271) DBX|151256_at_147 BLOC|complement(19944255..19944279) DBX|151256_at_129 BLOC|complement(19944273..19944297) DBX|151256_at_113 BLOC|complement(19944289..19944313) DBX|151256_at_102 BLOC|complement(19944300..19944324) DBX|151256_at_99 BLOC|complement(19944303..19944327) DBX|151256_at_90 BLOC|complement(19944312..19944336) DBX|151256_at_53 BLOC|complement(19944349..19944373) DBX|151256_at_225 BLOC|complement(19944177..19944201) DBX|151256_at_202 BLOC|complement(19944200..19944224) DBX|151256_at_200 BLOC|complement(19944202..19944226) } VERS|4.3 } # EOR GADR { RETE|ID 1 FBan0009581 GID 1 FBgn0031093 GSYM 1 CG9581 CGSYM 1 CG9581 ARM 1 X CLOC 1 19C1-19C1 SCAF 1 AE002611 TRREC 1 AALEN 1 545 ID|FBan0009581 SYM|CG9581 GENSR { GSYM|CG9581 ID|FBgn0031093 } ARM|X SCAF|AE002611 BLOC|complement(20001728..20003662) CLOCC|19C1-19C1 SQLEN|1935 GO|proteolysis ; GO:0006508 |metalloexopeptidase activity ; GO:0008235 |methionyl aminopeptidase activity ; GO:0004239 |X-Pro aminopeptidase activity ; GO:0008451 |metallopeptidase activity ; GO:0008237 ID2|FBan0009581 EST|LD39139 |RE20750 |RE35396 |GH18940 |GH19483 |EK019043 |bs82d02 |EC31786 |EP19735 |AT18991 |AT24692 |EK061715 |AT16609 |AT21207 |AT27925 |AT28821 |AT08263 |AT22244 |AT10103 |AT16612 |AT08935 |SD15947 |GM05102 |EK055445 |EK159503 |EK065335 |RE27930 |GH28592 |LD31733 |LD23233 |LD03768 |LD39431 |LD23682 |LD26304 |LP02189 |LP15271 CDNA|GH19483 AFFY|152770_at DT|20040816 TRREC { NAM|CG9581-RA SYN|FlyBase:FBtr0070026 |FlyBase:FBpp0070025 |GB_protein:AAF45368.1 |FlyBase:FBgn0081876 |FlyBase Annotation IDs:GA21891 |Dpse\GA21891 AANAM|CG9581-PA SQLEN|1878 (-) AALEN|545 BLOC|complement(20001728..20003098,20003156..20003662) CDS|complement(20001836..20003098,20003156..20003527) DT|20020704 } EVD { PRG|blastx_masked DB|aa_SPTR.othinv CLA|protein DT|20041008 DBX|Q7S034 BLOC|complement(20001887..20003095) DBX|Q7Q4S9 BLOC|complement(20001884..20003098) DBX|Q10439 BLOC|complement(20001878..20003098,20003228..20003326) } EVD { PRG|sim4 DB|na_gadfly.dros.RELEASE2 CLA|mRNA DT|20041008 DBX|CT17714.2 BLOC|complement(20001833..20003098,20003156..20003662) } EVD { PRG|genie_masked DB|dummy CLA|genie_masked DT|20041008 BLOC|complement(20001833..20003098,20003156..20003527) } EVD { PRG|dmel_r3_to_dmel_r4_migration DB|dmel_r3_affy_oligos CLA|oligonucleotide DT|20050125 DBX|152770_at_1509 BLOC|complement(20002085..20002109) DBX|152770_at_1490 BLOC|complement(20002104..20002128) DBX|152770_at_1456 BLOC|complement(20002138..20002162) DBX|152770_at_1423 BLOC|complement(20002171..20002195) DBX|152770_at_1398 BLOC|complement(20002196..20002220) DBX|152770_at_1350 BLOC|complement(20002244..20002268) DBX|152770_at_1326 BLOC|complement(20002268..20002292) DBX|152770_at_1827 BLOC|complement(20001767..20001791) DBX|152770_at_1769 BLOC|complement(20001825..20001849) DBX|152770_at_1763 BLOC|complement(20001831..20001855) DBX|152770_at_1742 BLOC|complement(20001852..20001876) DBX|152770_at_1701 BLOC|complement(20001893..20001917) DBX|152770_at_1601 BLOC|complement(20001993..20002017) DBX|152770_at_1551 BLOC|complement(20002043..20002067) } EVD { PRG|tblastx_masked DB|na_dbEST.insect CLA|EST DBX|AV403894 BLOC|complement(20001872..20002510) DBX|BM640746 BLOC|complement(20001884..20002534) DBX|BX627553 BLOC|complement(20002670..20003098) DBX|BM576746 BLOC|complement(20002778..20003098) } EVD { PRG|tblastxwrap_masked DB|na_scf_chunk_agambiae.fa CLA|DNA DT|20041008 DBX|AAAB01008963.1p18 BLOC|complement(20001884..20002048) DBX|AAAB01008963.1p18 BLOC|complement(20002034..20002150) DBX|AAAB01008963.1p18 BLOC|complement(20002178..20002702) DBX|AAAB01008963.1p18 BLOC|complement(20002802..20003098) } EVD { PRG|sim4 DB|na_dbEST.same.dmel CLA|EST DBX|LD39139.5prime BLOC|complement(20003084..20003098,20003156..20003619) DBX|RE20750.5prime BLOC|complement(20002928..20003098,20003156..20003631) DBX|RE35396.5prime BLOC|complement(20002926..20003098,20003156..20003638) DBX|GH18940.5prime BLOC|complement(20003086..20003649) DBX|GH19483:contig1 BLOC|complement(20003040..20003098,20003156..20003662) DBX|GH19483:contig2 BLOC|complement(20001724..20002161) DBX|RE27930.5prime BLOC|complement(20002933..20003106) DBX|GH28592.5prime BLOC|complement(20002878..20003098,20003156..20003549) DBX|LD31733.5prime BLOC|complement(20003000..20003098,20003156..20003593) DBX|LD23233.5prime BLOC|complement(20002831..20003098,20003156..20003597) DBX|LD03768.5prime BLOC|complement(20003065..20003098,20003156..20003598) DBX|LD39431.5prime BLOC|complement(20003042..20003098,20003156..20003601) DBX|LD23682.5prime BLOC|complement(20002972..20003098,20003156..20003608) DBX|LD26304.5prime BLOC|complement(20002891..20003098,20003156..20003610) DBX|LP02189.5prime BLOC|complement(20002945..20003098,20003156..20003614) DBX|LP15271.5prime BLOC|complement(20002893..20003098,20003156..20003615) } EVD { PRG|prosplign DB|aa_ncbi_other CLA|protein DT|20060124 DBX|NP_490725 BLOC|complement(20001884..20002975) } EVD { PRG|sim4 DB|na_transcript.dmel.RELEASE32 CLA|mRNA DT|20041008 DBX|CG9581-RA.32 BLOC|complement(20001728..20003098,20003156..20003662) } EVD { PRG|sim4 DB|na_transcript.dmel.RELEASE31 CLA|mRNA DT|20041008 DBX|CG9581-RA.31 BLOC|complement(20001728..20003098,20003156..20003662) } EVD { PRG|genscan_masked DB|dummy CLA|genscan_masked DT|20041008 BLOC|complement(20001833..20003098,20003156..20003527) } EVD { PRG|sim4tandem DB|na_gb.dmel CLA|cDNA DT|20050823 DBX|GH19483 BLOC|complement(20001728..20003098,20003156..20003662) } EVD { PRG|blastx_masked DB|aa_SPTR.insect CLA|protein DT|20041008 DBX|Q7PMS7 BLOC|complement(20001884..20001994,20002028..20003098) } EVD { PRG|blastx_masked DB|aa_SPTR.rodent CLA|protein DT|20041008 DBX|Q11136 BLOC|complement(20002028..20003047) DBX|Q9CWK4 BLOC|complement(20002028..20003047) DBX|Q8BHT9 BLOC|complement(20002340..20003071) } EVD { PRG|augustus DB|dummy CLA|augustus DT|20050713 BLOC|complement(20001833..20003098,20003156..20003527) } EVD { PRG|blastx_masked DB|aa_SPTR.othvert CLA|protein DT|20041008 DBX|Q7SXT5 BLOC|complement(20002028..20003044) DBX|Q7SY64 BLOC|complement(20002028..20003089) DBX|AAH66473 BLOC|complement(20001881..20003074,20003153..20003329) } EVD { PRG|tblastxwrap_masked DB|na_baylorf1_scfchunk.dpse CLA|so DT|20041008 DBX|Contig2105_Contig7229-3 BLOC|complement(20001839..20003101) DBX|Contig2105_Contig7229-2 BLOC|complement(20001839..20003101) DBX|Contig2105_Contig7229-3 BLOC|complement(20003153..20003329) } EVD { PRG|blastx_masked DB|aa_SPTR.dmel CLA|protein DT|20041008 DBX|P20905 BLOC|complement(20002368..20002397) DBX|AAM49860 BLOC|complement(20002368..20002397) DBX|Q8IPS7 BLOC|complement(20001881..20002621,20002520..20003050) DBX|Q8IHA9 BLOC|complement(20001881..20002621,20002520..20003050) DBX|Q9VG79 BLOC|complement(20001878..20001994,20002028..20003125) DBX|Q9W5W7 BLOC|complement(20001836..20003098,20003153..20003527) } EVD { PRG|sim4 DB|na_dbEST.diff.dmel CLA|EST DBX|EK019043.5prime BLOC|complement(20001968..20002234) DBX|bs82d02.y1 BLOC|complement(20001717..20002269) DBX|EC31786.5prime BLOC|complement(20002129..20002662) DBX|EP19735.3prime BLOC|complement(20002747..20003098,20003156..20003239) DBX|AT18991.5prime BLOC|complement(20002737..20003098,20003156..20003571) DBX|AT24692.5prime BLOC|complement(20002706..20003098,20003156..20003572) DBX|EK061715.5prime BLOC|complement(20003176..20003578) DBX|AT16609.5prime BLOC|complement(20002878..20003098,20003156..20003580) DBX|AT21207.5prime BLOC|complement(20002995..20003098,20003156..20003580) DBX|AT27925.5prime BLOC|complement(20003004..20003098,20003156..20003580) DBX|AT28821.5prime BLOC|complement(20003337..20003580) DBX|AT08263.5prime BLOC|complement(20002806..20003098,20003156..20003589) DBX|AT22244.5prime BLOC|complement(20002878..20003098,20003156..20003589) DBX|AT10103.5prime BLOC|complement(20002883..20003098,20003156..20003589) DBX|AT16612.5prime BLOC|complement(20003127..20003609) DBX|AT08935.5prime BLOC|complement(20002761..20003098,20003156..20003620) DBX|SD15947.5prime BLOC|complement(20002876..20003098,20003156..20003623) DBX|GM05102.5prime BLOC|complement(20003000..20003098,20003156..20003623) DBX|EK055445.5prime BLOC|complement(20003277..20003640) DBX|EK159503.5prime BLOC|complement(20003477..20003640) DBX|EK065335.5prime BLOC|complement(20003273..20003642) } EVD { PRG|blastx_masked DB|aa_SPTR.plant CLA|protein DT|20041008 DBX|Q9ZPZ5 BLOC|complement(20001884..20003095) DBX|Q8L780 BLOC|complement(20002028..20003140) DBX|Q8GYQ0 BLOC|complement(20001836..20003095,20003222..20003332) } EVD { PRG|blastx_masked DB|aa_SPTR.worm CLA|protein DT|20041008 DBX|O61710 BLOC|complement(20001884..20002975) DBX|O44995 BLOC|complement(20001884..20001997,20002028..20003089) } EVD { PRG|blastx_masked DB|aa_SPTR.primate CLA|protein DT|20041008 DBX|Q9BV27 BLOC|complement(20001875..20003071) DBX|Q8NDA6 BLOC|complement(20001875..20003071) DBX|Q9NQH7 BLOC|complement(20001875..20003071) } EVD { PRG|blastx_masked DB|aa_SPTR.yeast CLA|protein DT|20041008 DBX|P43590 BLOC|complement(20001860..20001982,20002019..20003044) DBX|P40051 BLOC|complement(20001905..20003098,20003216..20003326) } VERS|4.3 } # EOR GADR { RETE|ID 1 FBan0032825 GID 1 FBgn0062565 GSYM 1 Or19b CGSYM 1 CG32825 ARM 1 X CLOC 1 19B1-19B1 SCAF 1 AE002611 TRREC 1 AALEN 1 387 ID|FBan0032825 SYM|CG32825 GENSR { GSYM|Or19b ID|FBgn0062565 } ARM|X SCAF|AE002611 BLOC|19928335..19929704 CLOCC|19B1-19B1 SQLEN|1370 GO|integral to membrane ; GO:0016021 |membrane ; GO:0016020 |G-protein coupled receptor protein signaling pathway ; GO:0007186 |olfactory receptor activity ; GO:0004984 |sensory perception of smell ; GO:0007608 |odorant binding ; GO:0005549 ID2|FBan0032825 |FBgn0052825 SYN|CG32825 DT|20031201 TRREC { NAM|Or19b-RA SYN|FlyBase:FBtr0070003 |FlyBase Annotation IDs:CG32825-RA |FlyBase:FBpp0070002 |FlyBase Annotation IDs:CG32825-PA |GB_protein:AAN08991.1 |FlyBase:FBgn0077182 |FlyBase Annotation IDs:GA17168 |Dpse\Or19a |Dpse\GA17168 AANAM|Or19b-PA SQLEN|1164 AALEN|387 BLOC|join(19928335..19929071,19929225..19929585,19929639..19929704) CDS|join(19928335..19929071,19929225..19929585,19929639..19929701) CMT|comment=Range of putative ortholog from tblastn was extended |to cover the gene prediction DT|20020715 } EVD { PRG|bdgp_unknown_clonelocator DB|scaffoldBACs CLA|BAC DT|20041221 DBX|BACR11H15 BLOC|19831670..20009622 } EVD { PRG|sim4 DB|na_transcript.dmel.RELEASE31 CLA|mRNA DT|20041008 DBX|CG32825-RA.31 BLOC|join(19928335..19929071,19929225..19929585,19929639..19929704) } EVD { PRG|genscan_masked DB|dummy CLA|genscan_masked DT|20041008 BLOC|join(19928335..19929071,19929225..19929585,19930204..19930306, |19931314..19931478,19932760..19932936,19938768..19938910) } EVD { PRG|genie_masked DB|dummy CLA|genie_masked DT|20041008 BLOC|join(19928335..19929071,19929225..19929585,19929639..19929704) } EVD { PRG|augustus DB|dummy CLA|augustus DT|20050713 BLOC|join(19928335..19929071,19929225..19929585,19929639..19929704) } EVD { PRG|tblastxwrap_masked DB|na_baylorf1_scfchunk.dpse CLA|so DT|20041008 DBX|Contig2105_Contig7229-3 BLOC|19928338..19928844 DBX|Contig2105_Contig7229-2 BLOC|19928338..19928844 DBX|Contig6864_Contig4034-1 BLOC|19928599..19928994 DBX|Contig2105_Contig7229-3 BLOC|19928839..19929072 DBX|Contig2105_Contig7229-2 BLOC|19928839..19929072 DBX|Contig2105_Contig7229-3 BLOC|19929223..19929600 DBX|Contig2105_Contig7229-2 BLOC|19929223..19929600 DBX|Contig6864_Contig4034-1 BLOC|19929358..19929594 } EVD { PRG|blastx_masked DB|aa_SPTR.dmel CLA|protein DT|20041008 DBX|Q8IRZ5 BLOC|join(19928335..19929072,19929190..19929588) DBX|Q9I816 BLOC|join(19928335..19929072,19929190..19929588) DBX|O46077 BLOC|join(19928347..19928994,19929220..19929588) DBX|P81923 BLOC|join(19928347..19929267,19929615..19929689) } EVD { PRG|sim4 DB|na_transcript.dmel.RELEASE32 CLA|mRNA DT|20041008 DBX|CG32825-RA.32 BLOC|join(19928335..19929071,19929225..19929585,19929639..19929704) } VERS|4.3 } # EOR GADR { RETE|ID 1 FBan0009577 GID 1 FBgn0031092 GSYM 1 CG9577 CGSYM 1 CG9577 ARM 1 X CLOC 1 19C1-19C1 SCAF 1 AE002611 TRREC 1 AALEN 1 312 ID|FBan0009577 SYM|CG9577 GENSR { GSYM|CG9577 ID|FBgn0031092 } ARM|X SCAF|AE002611 BLOC|20000357..20001768 CLOCC|19C1-19C1 SQLEN|1412 GO|fatty acid beta-oxidation ; GO:0006635 |hydro-lyase activity ; GO:0016836 |delta5-delta2,4-dienoyl-CoA isomerase activity ; GO:0008416 |oxidoreductase activity ; GO:0016491 ID2|FBan0009577 EST|GM32555 |EK261015 |EC30062 |EC34262 |EC23762 |RE22677 |RH48085 |RH48029 |LP10472 |LP03984 |LP10372 |RE27226 |LP16846 |RE70147 |RE35840 |GH06417 |GH06131 |RH04144 |RH02340 |HL02240 |LP11081 CDNA|RE22677 AFFY|145415_at DT|20040816 TRREC { NAM|CG9577-RA SYN|FlyBase:FBtr0070007 |FlyBase:FBpp0070006 |GB_protein:AAF45374.2 |FlyBase:FBgn0081872 |FlyBase Annotation IDs:GA21887 |Dpse\GA21887 AANAM|CG9577-PA SQLEN|1135 AALEN|312 BLOC|join(20000357..20000498,20000639..20000801,20000873..20001497, |20001564..20001768) CDS|join(20000447..20000498,20000639..20000801,20000873..20001497, |20001564..20001659) CMT|comment=Range of putative ortholog from tblastn was extended |to cover the gene prediction DT|20020704 } EVD { PRG|bdgp_unknown_clonelocator DB|scaffoldBACs CLA|BAC DT|20041221 DBX|BACR11H15 BLOC|19831670..20009622 } EVD { PRG|blastx_masked DB|aa_SPTR.othinv CLA|protein DT|20041008 DBX|Q8WZH4 BLOC|join(20000701..20000802,20000874..20001488) DBX|Q7QCJ6 BLOC|join(20000874..20001506,20001591..20001659) DBX|O74188 BLOC|20000925..20001488 } EVD { PRG|sim4 DB|na_gadfly.dros.RELEASE2 CLA|mRNA DT|20041008 DBX|CT17498.2 BLOC|join(20000374..20000498,20000639..20000801,20000873..20001497, |20001564..20001662) } EVD { PRG|genie_masked DB|dummy CLA|genie_masked DT|20041008 BLOC|join(20000447..20000498,20000639..20000801,20000873..20001497, |20001564..20001662) } EVD { PRG|dmel_r3_to_dmel_r4_migration DB|dmel_r3_affy_oligos CLA|oligonucleotide DT|20050125 DBX|145415_at_671 BLOC|20001243..20001267 DBX|145415_at_726 BLOC|20001298..20001322 DBX|145415_at_756 BLOC|20001328..20001352 DBX|145415_at_794 BLOC|20001366..20001390 DBX|145415_at_895 BLOC|20001467..20001491 DBX|145415_at_932 BLOC|20001570..20001594 DBX|145415_at_494 BLOC|20001066..20001090 DBX|145415_at_522 BLOC|20001094..20001118 DBX|145415_at_533 BLOC|20001105..20001129 DBX|145415_at_558 BLOC|20001130..20001154 DBX|145415_at_563 BLOC|20001135..20001159 DBX|145415_at_587 BLOC|20001159..20001183 DBX|145415_at_613 BLOC|20001185..20001209 DBX|145415_at_636 BLOC|20001208..20001232 } EVD { PRG|tblastx_masked DB|na_dbEST.insect CLA|EST DBX|BX552848 BLOC|join(20000701..20000844,20000874..20001242) DBX|BM600369 BLOC|20000874..20001233 DBX|BX622573 BLOC|20000874..20001254 DBX|BX552847 BLOC|join(20001105..20001497,20001591..20001662) DBX|BX568985 BLOC|join(20001198..20001497,20001591..20001662) DBX|BX550861 BLOC|join(20001198..20001497,20001591..20001662) } EVD { PRG|tblastxwrap_masked DB|na_scf_chunk_agambiae.fa CLA|DNA DT|20041008 DBX|AAAB01008859.1p64 BLOC|20000925..20001506 } EVD { PRG|sim4 DB|na_dbEST.same.dmel CLA|EST DBX|RE22677:contig2 BLOC|join(20001150..20001497,20001564..20001762) DBX|RE22677:contig1 BLOC|join(20000357..20000498,20000639..20000801,20000873..20001053) DBX|RH48085.5prime BLOC|join(20000358..20000498,20000639..20000801,20000873..20001153) DBX|RH48029.5prime BLOC|join(20000358..20000498,20000639..20000801,20000873..20001155) DBX|LP10472.5prime BLOC|join(20000374..20000498,20000639..20000801,20000873..20001153) DBX|LP03984.5prime BLOC|join(20000374..20000498,20000639..20000801,20000873..20001155) DBX|LP10372.5prime BLOC|join(20000374..20000498,20000639..20000801,20000873..20001195) DBX|RE27226.5prime BLOC|join(20000380..20000498,20000639..20000801,20000873..20001240) DBX|LP16846.5prime BLOC|join(20000381..20000498,20000639..20000801,20000873..20001185) DBX|RE70147.5prime BLOC|join(20000381..20000498,20000639..20000801,20000873..20001311) DBX|RE35840.5prime BLOC|join(20000382..20000498,20000639..20000801,20000873..20001121) DBX|GH06417.5prime BLOC|join(20000386..20000498,20000639..20000801,20000873..20001053) DBX|GH06131:contig2 BLOC|join(20001230..20001497,20001564..20001809) DBX|GH06131:contig1 BLOC|join(20000386..20000498,20000639..20000801,20000873..20001221) DBX|RH04144.5prime BLOC|join(20000409..20000498,20000639..20000801,20000873..20001130) DBX|RH02340.5prime BLOC|join(20000409..20000498,20000639..20000801,20000873..20001155) DBX|HL02240.5prime BLOC|join(20000465..20000498,20000639..20000801,20000873..20001028) DBX|LP11081.5prime BLOC|join(20000646..20000801,20000873..20001155) } EVD { PRG|sim4 DB|na_transcript.dmel.RELEASE32 CLA|mRNA DT|20041008 DBX|CG9577-RA.32 BLOC|join(20000357..20000498,20000639..20000801,20000873..20001497, |20001564..20001768) } EVD { PRG|sim4 DB|na_transcript.dmel.RELEASE31 CLA|mRNA DT|20041008 DBX|CG9577-RA.31 BLOC|join(20000357..20000498,20000639..20000801,20000873..20001497, |20001564..20001768) } EVD { PRG|genscan_masked DB|dummy CLA|genscan_masked DT|20041008 BLOC|join(20000447..20000498,20000656..20001497,20001564..20001662) } EVD { PRG|sim4tandem DB|na_gb.dmel CLA|cDNA DT|20050823 DBX|RE22677 BLOC|join(20000357..20000498,20000639..20000801,20000873..20001497, |20001564..20001765) } EVD { PRG|blastx_masked DB|aa_SPTR.rodent CLA|protein DT|20041008 DBX|AAH62226 BLOC|20000871..20001497 DBX|O35459 BLOC|20000871..20001497 DBX|Q62651 BLOC|20000871..20001497 } EVD { PRG|augustus DB|dummy CLA|augustus DT|20050713 BLOC|join(20000656..20000801,20000873..20001497,20001564..20001662) } EVD { PRG|blastx_masked DB|aa_SPTR.othvert CLA|protein DT|20041008 DBX|Q7ZZ04 BLOC|20000874..20001485 DBX|Q7T1D9 BLOC|20000874..20001485 DBX|Q95KZ6 BLOC|20000874..20001488 } EVD { PRG|tblastxwrap_masked DB|na_baylorf1_scfchunk.dpse CLA|so DT|20041008 DBX|Contig2105_Contig7229-3 BLOC|20000701..20000802 DBX|Contig2105_Contig7229-2 BLOC|20000701..20000802 DBX|Contig2105_Contig7229-3 BLOC|20000865..20001500 DBX|Contig2105_Contig7229-2 BLOC|20000865..20001500 DBX|Contig2105_Contig7229-3 BLOC|20001537..20001659 DBX|Contig2105_Contig7229-2 BLOC|20001537..20001659 } EVD { PRG|blastx_masked DB|aa_SPTR.dmel CLA|protein DT|20041008 DBX|Q9W5W8 BLOC|join(20000632..20000844,20000874..20001500) DBX|Q9V6U5 BLOC|20000688..20001488 DBX|Q9V6F0 BLOC|20000982..20001443 } EVD { PRG|sim4 DB|na_dbEST.diff.dmel CLA|EST DBX|GM32555.5prime BLOC|join(20000432..20000498,20000639..20000801,20000873..20001303) DBX|EK261015.5prime BLOC|20000665..20001159 DBX|EC30062.5prime BLOC|20001215..20001421 DBX|EC34262.5prime BLOC|20001215..20001429 DBX|EC23762.5prime BLOC|join(20001215..20001497,20001564..20001621) } EVD { PRG|blastx_masked DB|aa_SPTR.plant CLA|protein DT|20041008 DBX|Q8RUL6 BLOC|20000751..20001497 DBX|Q9FHR8 BLOC|join(20000844..20001497,20001591..20001659) DBX|O23520 BLOC|20000871..20001491 } EVD { PRG|blastx_masked DB|aa_SPTR.worm CLA|protein DT|20041008 DBX|Q20959 BLOC|join(20000686..20000799,20000865..20001518) DBX|Q9TYL2 BLOC|join(20000686..20000799,20000871..20001530) DBX|Q9NEZ8 BLOC|20000925..20001491 } EVD { PRG|blastx_masked DB|aa_SPTR.primate CLA|protein DT|20041008 DBX|Q8WVX0 BLOC|20000871..20001497 DBX|Q96EZ9 BLOC|20000871..20001497 DBX|Q13011 BLOC|20000871..20001497 } EVD { PRG|promoter DB|dummy CLA|promoter DT|20041008 BLOC|20000520..20000521 } VERS|4.3 } # EOR GADR { RETE|ID 1 FBan0009571 GID 1 FBgn0031086 GSYM 1 CG9571 CGSYM 1 CG9571 ARM 1 X CLOC 1 19B1-19B1 SCAF 1 AE002611 TRREC 1 AALEN 1 260 ID|FBan0009571 SYM|CG9571 GENSR { GSYM|CG9571 ID|FBgn0031086 } ARM|X SCAF|AE002611 BLOC|complement(19925540..19926322) CLOCC|19B1-19B1 SQLEN|783 GO|regulation of transcription from RNA polymerase II promoter ; GO:0006357 |nucleus ; GO:0005634 |transcription factor activity ; GO:0003700 ID2|FBan0009571 SYN|Dmcg9571 AFFY|145411_at DT|20031201 TRREC { NAM|CG9571-RA SYN|FlyBase:FBtr0070032 |FlyBase:FBpp0070031 |GB_protein:AAF45367.1 AANAM|CG9571-PA SQLEN|783 (-) AALEN|260 BLOC|complement(19925540..19926322) CDS|complement(19925543..19926322) DT|20020704 } EVD { PRG|blastx_masked DB|aa_SPTR.othinv CLA|protein DT|20041008 DBX|Q8MUS6 BLOC|complement(19925693..19926148) DBX|Q7YTB3 BLOC|complement(19925816..19926148) DBX|Q8MXW9 BLOC|complement(19925867..19926148,19926248..19926325) } EVD { PRG|sim4 DB|na_gadfly.dros.RELEASE2 CLA|mRNA DT|20041008 DBX|CT17746.2 BLOC|complement(19925540..19926322) } EVD { PRG|genie_masked DB|dummy CLA|genie_masked DT|20041008 BLOC|complement(19925540..19926322) } EVD { PRG|dmel_r3_to_dmel_r4_migration DB|dmel_r3_affy_oligos CLA|oligonucleotide DT|20050125 DBX|145411_at_733 BLOC|complement(19925578..19925602) DBX|145411_at_653 BLOC|complement(19925658..19925682) DBX|145411_at_595 BLOC|complement(19925716..19925740) DBX|145411_at_567 BLOC|complement(19925744..19925768) DBX|145411_at_491 BLOC|complement(19925820..19925844) DBX|145411_at_468 BLOC|complement(19925843..19925867) DBX|145411_at_458 BLOC|complement(19925853..19925877) DBX|145411_at_437 BLOC|complement(19925874..19925898) DBX|145411_at_325 BLOC|complement(19925986..19926010) DBX|145411_at_304 BLOC|complement(19926007..19926031) DBX|145411_at_295 BLOC|complement(19926016..19926040) DBX|145411_at_275 BLOC|complement(19926036..19926060) DBX|145411_at_203 BLOC|complement(19926108..19926132) DBX|145411_at_181 BLOC|complement(19926130..19926154) } EVD { PRG|tblastxwrap_masked DB|na_scf_chunk_agambiae.fa CLA|DNA DT|20041008 DBX|AAAB01008964.1p62 BLOC|complement(19925900..19926058) DBX|AAAB01008944.1p15 BLOC|complement(19925801..19926106) DBX|AAAB01008987.1p21 BLOC|complement(19925957..19926133) DBX|AAAB01008859.1p100 BLOC|complement(19925900..19926151) DBX|AAAB01008987.1p86 BLOC|complement(19925915..19926160) DBX|AAAB01008960.1p96 BLOC|complement(19925915..19926163) DBX|AAAB01008978.1p6 BLOC|complement(19925939..19926202) DBX|AAAB01008984.1p88 BLOC|complement(19925867..19926214) DBX|AAAB01008859.1p100 BLOC|complement(19925900..19926214) DBX|AAAB01008846.1p104 BLOC|complement(19925942..19926229) } EVD { PRG|prosplign DB|aa_ncbi_other CLA|protein DT|20060124 DBX|AAW56613 BLOC|complement(19925762..19926223,19926475..19926543) DBX|NP_998761 BLOC|complement(19925445..19925498,19925511..19925558,19925676..19925777, |19925816..19925872,19925900..19926133) DBX|NP_001021593 BLOC|complement(19925526..19925594,19925661..19925711,19925787..19926182, |19926269..19926627) DBX|NP_001021594 BLOC|complement(19925526..19925594,19925661..19925711,19925787..19926235, |19926391..19926435,19926436..19926555) DBX|NP_001021595 BLOC|complement(19925526..19925594,19925661..19925711,19925787..19926368, |19926434..19926555) DBX|NP_001021596 BLOC|complement(19925526..19925594,19925661..19925711,19925787..19926424) DBX|NP_001021598 BLOC|complement(19925526..19925594,19925661..19925711,19925787..19926421, |19926487..19926699) DBX|NP_001023406 BLOC|complement(19925538..19925604,19925862..19926361) DBX|NP_954714 BLOC|complement(19925651..19926160,19926196..19926298,19926434..19926669) } EVD { PRG|sim4 DB|na_transcript.dmel.RELEASE32 CLA|mRNA DT|20041008 DBX|CG9571-RA.32 BLOC|complement(19925540..19926322) } EVD { PRG|sim4 DB|na_transcript.dmel.RELEASE31 CLA|mRNA DT|20041008 DBX|CG9571-RA.31 BLOC|complement(19925540..19926322) } EVD { PRG|genscan_masked DB|dummy CLA|genscan_masked DT|20041008 BLOC|complement(19916287..19916480,19917194..19917243,19922753..19922971, |19925544..19926322) } EVD { PRG|blastx_masked DB|aa_SPTR.insect CLA|protein DT|20041008 DBX|Q7PGH8 BLOC|complement(19925852..19926118) DBX|Q7PVY5 BLOC|complement(19925867..19926148) } EVD { PRG|blastx_masked DB|aa_SPTR.rodent CLA|protein DT|20041008 DBX|Q8BIK9 BLOC|complement(19925834..19926148) DBX|Q63249 BLOC|complement(19925900..19926148) DBX|Q63245 BLOC|complement(19925900..19926148) } EVD { PRG|prosplign DB|aa_ncbi_dmel CLA|protein DT|20060123 DBX|AAY51579 BLOC|complement(19925433..19925456,19925966..19926019,19926077..19926160, |19926203..19926223,19926230..19926250) } EVD { PRG|augustus DB|dummy CLA|augustus DT|20050713 BLOC|complement(19925540..19926322) } EVD { PRG|tblastxwrap_masked DB|na_baylorf1_scfchunk.dpse CLA|so DT|20041008 DBX|Contig1006_Contig943-13 BLOC|complement(19925867..19926265) DBX|Contig3479_Contig7346-2 BLOC|complement(19925900..19926052) DBX|Contig3479_Contig7346-3 BLOC|complement(19925900..19926052) DBX|Dpf1glom10-1 BLOC|complement(19925909..19926151) DBX|Contig2587_Contig858-2 BLOC|complement(19925915..19926163) DBX|Contig124_Contig7227-1 BLOC|complement(19925942..19926214) DBX|Contig7891_Contig7492A.fa-17 BLOC|complement(19925915..19926247) DBX|Contig2592_Contig4729-1 BLOC|complement(19925861..19926253) DBX|Contig2592_Contig4729-2 BLOC|complement(19925861..19926253) DBX|Contig1006_Contig943-14 BLOC|complement(19925867..19926265) } EVD { PRG|blastx_masked DB|aa_SPTR.othvert CLA|protein DT|20041008 DBX|Q9DEN4 BLOC|complement(19925837..19926148) DBX|Q7T1C2 BLOC|complement(19925843..19926148) DBX|Q800K3 BLOC|complement(19925915..19926148) } EVD { PRG|blastx_masked DB|aa_SPTR.dmel CLA|protein DT|20041008 DBX|Q7YU22 BLOC|complement(19925525..19926148) DBX|P14734 BLOC|complement(19925525..19926148) DBX|P32027 BLOC|complement(19925696..19926148) DBX|AAN71548 BLOC|complement(19925696..19926148) DBX|Q02360 BLOC|complement(19925732..19926148) DBX|Q9VTF7 BLOC|complement(19925834..19926148) DBX|Q9V481 BLOC|complement(19925843..19926148) DBX|P32028 BLOC|complement(19925849..19926148) DBX|P32030 BLOC|complement(19925861..19926148) DBX|Q961V5 BLOC|complement(19925861..19926148) DBX|P32029 BLOC|complement(19925867..19926148) DBX|Q02361 BLOC|complement(19925900..19926148) DBX|Q8T4G1 BLOC|complement(19925900..19926148) DBX|Q9U1H1 BLOC|complement(19925915..19926148) DBX|Q8IQE9 BLOC|complement(19925939..19926148) DBX|Q8T9W8 BLOC|complement(19925975..19926148) DBX|Q9W5X5 BLOC|complement(19925543..19926322) DBX|Q8SZ95 BLOC|complement(19925867..19926148,19926251..19926334) DBX|P32031 BLOC|complement(19925867..19926148,19926251..19926334) } EVD { PRG|blastx_masked DB|aa_SPTR.worm CLA|protein DT|20041008 DBX|Q22510 BLOC|complement(19925867..19926148) DBX|Q95QA9 BLOC|complement(19925867..19926121) DBX|Q18694 BLOC|complement(19925819..19926148) } EVD { PRG|blastx_masked DB|aa_SPTR.primate CLA|protein DT|20041008 DBX|AAQ76879 BLOC|complement(19925813..19926148) DBX|Q9NU39 BLOC|complement(19925813..19926148) DBX|Q14488 BLOC|complement(19925828..19926148) } VERS|4.3 } # EOR GADR { RETE|ID 1 FBan0009576 GID 1 FBgn0031091 GSYM 1 CG9576 CGSYM 1 CG9576 ARM 1 X CLOC 1 19B3-19C1 SCAF 1 AE002611 TRREC 1 AALEN 1 520 ID|FBan0009576 SYM|CG9576 GENSR { GSYM|CG9576 ID|FBgn0031091 } ARM|X SCAF|AE002611 BLOC|complement(19994290..19996667) CLOCC|19B3-19C1 SQLEN|2378 ID2|FBan0009576 EST|RE73616 |LP22483 |LP20965 |RE56187 |RE56188 |LD43541 |EK062464 |SD12969 |EK054517 |EK281633 |SD08850 |AT04022 |SD10655 CDNA|LD43541 AFFY|155024_at DT|20040816 TRREC { NAM|CG9576-RA SYN|FlyBase:FBtr0070027 |FlyBase:FBpp0070026 |GB_protein:AAF45372.2 |FlyBase:FBgn0081871 |FlyBase Annotation IDs:GA21886 |Dpse\GA21886 AANAM|CG9576-PA SQLEN|2222 (-) AALEN|520 BLOC|complement(19994290..19995812,19995877..19996379,19996472..19996667) CDS|complement(19994858..19995812,19995877..19996379,19996472..19996573) CMT|comment=Range of putative ortholog from tblastn was extended |to cover the gene prediction DT|20020704 } EVD { PRG|blastx_masked DB|aa_SPTR.othinv CLA|protein DT|20041008 DBX|Q7QD33 BLOC|complement(19995308..19995937,19995915..19996376) DBX|Q7PZ79 BLOC|complement(19995885..19996400) } EVD { PRG|sim4 DB|na_gadfly.dros.RELEASE2 CLA|mRNA DT|20041008 DBX|CT17718.2 BLOC|complement(19994855..19995606,19995751..19995812,19995877..19996379, |19996472..19996667) } EVD { PRG|genie_masked DB|dummy CLA|genie_masked DT|20041008 BLOC|complement(19994855..19995812,19995877..19996379,19996472..19996573) } EVD { PRG|dmel_r3_to_dmel_r4_migration DB|dmel_r3_affy_oligos CLA|oligonucleotide DT|20050125 DBX|155024_at_1845 BLOC|complement(19994511..19994535) DBX|155024_at_1838 BLOC|complement(19994518..19994542) DBX|155024_at_1790 BLOC|complement(19994566..19994590) DBX|155024_at_1768 BLOC|complement(19994588..19994612) DBX|155024_at_1718 BLOC|complement(19994638..19994662) DBX|155024_at_1673 BLOC|complement(19994683..19994707) DBX|155024_at_1631 BLOC|complement(19994725..19994749) DBX|155024_at_1553 BLOC|complement(19994803..19994827) DBX|155024_at_1510 BLOC|complement(19994846..19994870) DBX|155024_at_1499 BLOC|complement(19994857..19994881) DBX|155024_at_1464 BLOC|complement(19994892..19994916) DBX|155024_at_1986 BLOC|complement(19994370..19994394) DBX|155024_at_1941 BLOC|complement(19994415..19994439) DBX|155024_at_1929 BLOC|complement(19994427..19994451) } EVD { PRG|tblastxwrap_masked DB|na_scf_chunk_agambiae.fa CLA|DNA DT|20041008 DBX|AAAB01008859.1p18 BLOC|complement(19995915..19996049) DBX|AAAB01008859.1p18 BLOC|complement(19996065..19996340) } EVD { PRG|sim4 DB|na_dbEST.same.dmel CLA|EST DBX|RE73616.5prime BLOC|complement(19995912..19996379,19996472..19996609) DBX|LP22483.5prime BLOC|complement(19995912..19996379,19996472..19996639) DBX|LP20965.5prime BLOC|complement(19995912..19996379,19996472..19996639) DBX|RE56187.5prime BLOC|complement(19996009..19996379,19996472..19996648) DBX|RE56188.5prime BLOC|complement(19996180..19996379,19996472..19996648) DBX|LD43541:contig1 BLOC|complement(19996001..19996379,19996472..19996667) DBX|LD43541:contig2 BLOC|complement(19994292..19995061) } EVD { PRG|sim4 DB|na_transcript.dmel.RELEASE32 CLA|mRNA DT|20041008 DBX|CG9576-RA.32 BLOC|complement(19994290..19995812,19995877..19996379,19996472..19996667) } EVD { PRG|sim4 DB|na_transcript.dmel.RELEASE31 CLA|mRNA DT|20041008 DBX|CG9576-RA.31 BLOC|complement(19994290..19995812,19995877..19996379,19996472..19996667) } EVD { PRG|genscan_masked DB|dummy CLA|genscan_masked DT|20041008 BLOC|complement(19994855..19995812,19995877..19996379,19996472..19996573) } EVD { PRG|sim4tandem DB|na_gb.dmel CLA|cDNA DT|20050823 DBX|LD43541 BLOC|complement(19994290..19995812,19995877..19996379,19996472..19996667) } EVD { PRG|blastx_masked DB|aa_SPTR.rodent CLA|protein DT|20041008 DBX|Q8BNA4 BLOC|complement(19995885..19996376) DBX|AAH57174 BLOC|complement(19995599..19995697,19995876..19996376,19996460..19996564) DBX|Q9DAG9 BLOC|complement(19995876..19996376,19996460..19996564) } EVD { PRG|augustus DB|dummy CLA|augustus DT|20050713 BLOC|complement(19994855..19995812,19995877..19996379,19996472..19996573) } EVD { PRG|blastx_masked DB|aa_SPTR.othvert CLA|protein DT|20041008 DBX|Q8AW58 BLOC|complement(19995599..19995829,19995885..19996409) } EVD { PRG|tblastxwrap_masked DB|na_baylorf1_scfchunk.dpse CLA|so DT|20041008 DBX|Contig2105_Contig7229-2 BLOC|complement(19995638..19995811) DBX|Contig2105_Contig7229-3 BLOC|complement(19995638..19995811) DBX|Contig2105_Contig7229-2 BLOC|complement(19995885..19996136) DBX|Contig2105_Contig7229-3 BLOC|complement(19995885..19996136) DBX|Contig2105_Contig7229-2 BLOC|complement(19996110..19996379) DBX|Contig2105_Contig7229-3 BLOC|complement(19996110..19996379) } EVD { PRG|blastx_masked DB|aa_SPTR.dmel CLA|protein DT|20041008 DBX|Q9VKW2 BLOC|complement(19995738..19996376,19996469..19996561) DBX|Q9NGN6 BLOC|complement(19995738..19996376,19996469..19996561) DBX|Q9W5W9 BLOC|complement(19994858..19995829,19995876..19996379,19996460..19996573) } EVD { PRG|sim4 DB|na_dbEST.diff.dmel CLA|EST DBX|EK062464.5prime BLOC|complement(19994434..19994771) DBX|SD12969.3prime BLOC|complement(19994292..19994813) DBX|EK054517.5prime BLOC|complement(19994697..19995118) DBX|EK281633.5prime BLOC|complement(19994822..19995287) DBX|SD08850.5prime BLOC|complement(19995953..19996379,19996472..19996590) DBX|AT04022.5prime BLOC|complement(19995739..19995812,19995877..19996379,19996472..19996592) DBX|SD10655.5prime BLOC|complement(19996041..19996379,19996472..19996621) } EVD { PRG|blastx_masked DB|aa_SPTR.primate CLA|protein DT|20041008 DBX|Q9NSX7 BLOC|complement(19995876..19996253) DBX|Q9NXC0 BLOC|complement(19995602..19995814,19995885..19996376) DBX|Q9BWX1 BLOC|complement(19995876..19996376,19996460..19996564) } EVD { PRG|promoter DB|dummy CLA|promoter DT|20041008 BLOC|complement(19996644..19996645) } VERS|4.3 } # EOR GADR { RETE|ID 1 FBan0033517 GID 1 FBgn0053517 GSYM 1 D2R CGSYM 1 CG33517 ARM 1 X CLOC 1 19A4-19A4 SCAF 1 AE002611 TRREC 5 AALEN 5 506 ID|FBan0033517 SYM|CG33517 GENSR { GSYM|D2R ID|FBgn0053517 } ARM|X SCAF|AE002611 BLOC|complement(19838619..19862130) CLOCC|19A4-19A4 SQLEN|23512 GO|amine receptor activity ; GO:0008227 |transmission of nerve impulse ; GO:0019226 |dopamine receptor signaling pathway ; GO:0007212 |G-protein coupled receptor activity, unknown ligand ; GO:0016526 |dopamine receptor activity ; GO:0004952 |dopamine D2 receptor-like receptor activity ; GO:0001591 ID2|FBan0017004 |FBgn0031084 |FBgn0062410 |FBgn0031083 SYN|CG17004 |DD2R |CG9569 EST|EK143438 |RH36484 |RH26295 |RH25070 |RE06088 |RH26429 |RH46216 |RH23388 |RH32284 |RH25216 |RH58787 |RH13501 |GH11958 CDNA|RE06088 AFFY|145408_at |145409_at DT|20050909 TRREC { NAM|D2R-RD SYN|FlyBase:FBtr0091462 |FlyBase Annotation IDs:CG33517-RD |FlyBase:FBpp0099565 |GB_protein:AAX52463.1 |FlyBase Annotation IDs:CG33517-PD AANAM|D2R-PD SQLEN|1767 (-) AALEN|506 BLOC|complement(19840896..19841167,19841278..19841378,19841567..19841701, |19844262..19844560,19845067..19845319,19845392..19845501,19860642..19860832, |19861688..19862093) CDS|complement(19840959..19841167,19841278..19841378,19841567..19841701, |19844262..19844560,19845067..19845319,19845392..19845501,19860642..19860832, |19861688..19861907) DT|20050909 } TRREC { NAM|D2R-RE SYN|FlyBase:FBtr0100196 |FlyBase Annotation IDs:CG33517-RE |FlyBase:FBpp0099566 |GB_protein:AAZ52487.1 |FlyBase Annotation IDs:CG33517-PE AANAM|D2R-PE SQLEN|1804 (-) AALEN|572 BLOC|complement(19840896..19841167,19841278..19841378,19841567..19841701, |19844262..19844560,19845067..19845319,19845392..19845501,19860642..19860832, |19861688..19862130) CDS|complement(19840959..19841167,19841278..19841378,19841567..19841701, |19844262..19844560,19845067..19845319,19845392..19845501,19860642..19860832, |19861688..19862105) CMT|status=not done DT|20050909 } TRREC { NAM|D2R-RB SYN|FlyBase:FBtr0070034 |FlyBase Annotation IDs:CG33517-RB |CG17004-RB |DD2R-RB |FlyBase:FBpp0099563 |GB_protein:AAF45375.2 |FlyBase Annotation IDs:CG33517-PB AANAM|D2R-PB SQLEN|4357 (-) AALEN|466 BLOC|complement(19838619..19841167,19841278..19841378,19841567..19841701, |19842791..19843066,19844262..19844560,19845067..19845319,19845392..19845501, |19847039..19847594,19847654..19847731) CDS|complement(19840959..19841167,19841278..19841378,19841567..19841701, |19842791..19843066,19844262..19844560,19845067..19845319,19845392..19845501, |19847039..19847053) DT|20050909 } TRREC { NAM|D2R-RC SYN|FlyBase:FBtr0091461 |FlyBase Annotation IDs:CG33517-RC |D2R-RE |FlyBase:FBpp0099564 |GB_protein:AAX52464.1 |FlyBase Annotation IDs:CG33517-PC AANAM|D2R-PC SQLEN|2067 (-) AALEN|606 BLOC|complement(19840896..19841167,19841278..19841378,19841567..19841701, |19842767..19843066,19844262..19844560,19845067..19845319,19845392..19845501, |19860642..19860832,19861688..19862093) CDS|complement(19840959..19841167,19841278..19841378,19841567..19841701, |19842767..19843066,19844262..19844560,19845067..19845319,19845392..19845501, |19860642..19860832,19861688..19861907) CMT|status=not done DT|20050909 } TRREC { NAM|D2R-RA SYN|FlyBase:FBtr0070033 |FlyBase Annotation IDs:CG33517-RA |CG9569-RB |D2R-RC |FlyBase:FBpp0099562 |GB_protein:AAX52462.1 |FlyBase Annotation IDs:CG33517-PA AANAM|D2R-PA SQLEN|1632 (-) AALEN|461 BLOC|complement(19840896..19841167,19841278..19841378,19844262..19844560, |19845067..19845319,19845392..19845501,19860642..19860832,19861688..19862093) CDS|complement(19840959..19841167,19841278..19841378,19844262..19844560, |19845067..19845319,19845392..19845501,19860642..19860832,19861688..19861907) DT|20050909 } EVD { PRG|blastx_masked DB|aa_SPTR.othinv CLA|protein DT|20041008 DBX|Q7QA35 BLOC|complement(19841216..19841380,19841566..19841763,19842964..19843065, |19844264..19844518,19845052..19845321,19845391..19845450) DBX|Q7QB24 BLOC|complement(19845061..19845321,19845391..19845489) DBX|O77254 BLOC|complement(19845052..19845321,19845391..19845495) } EVD { PRG|sim4 DB|na_gadfly.dros.RELEASE2 CLA|mRNA DT|20041008 DBX|CT37739.2 BLOC|complement(19840956..19841167,19841278..19841378,19841567..19841701, |19842791..19843066,19844262..19844560,19845067..19845319,19845392..19845507) DBX|CT17758.2 BLOC|complement(19860336..19860416,19860642..19860832,19861688..19862804) } EVD { PRG|repeatmasker DB|dummy CLA|RepeatMasker:dummy DT|20041008 DBX|AF368884 BLOC|complement(19853117..19853193) } EVD { PRG|genie_masked DB|dummy CLA|genie_masked DT|20041008 BLOC|complement(19840956..19841167,19841278..19841378,19841567..19841701, |19842791..19843066,19843283..19843374) BLOC|complement(19844258..19844560,19845067..19845319,19845392..19845450) BLOC|complement(19860336..19860416,19860642..19860928,19861688..19862804) } EVD { PRG|dmel_r3_to_dmel_r4_migration DB|dmel_r3_affy_oligos CLA|oligonucleotide DT|20050125 DBX|145408_at_1160 BLOC|complement(19841286..19841310) DBX|145408_at_1138 BLOC|complement(19841308..19841332) DBX|145408_at_1103 BLOC|complement(19841343..19841367) DBX|145408_at_1097 BLOC|complement(19841349..19841373) DBX|145408_at_1055 BLOC|complement(19841579..19841603) DBX|145408_at_962 BLOC|complement(19841672..19841696) DBX|145408_at_922 BLOC|complement(19842801..19842825) DBX|145408_at_888 BLOC|complement(19842835..19842859) DBX|145408_at_884 BLOC|complement(19842839..19842863) DBX|145408_at_774 BLOC|complement(19842949..19842973) DBX|145409_at_1326 BLOC|complement(19860387..19860411) DBX|145409_at_1290 BLOC|complement(19860648..19860672) DBX|145409_at_1280 BLOC|complement(19860658..19860682) DBX|145409_at_1250 BLOC|complement(19860688..19860712) DBX|145409_at_1226 BLOC|complement(19860712..19860736) DBX|145409_at_1199 BLOC|complement(19860739..19860763) DBX|145409_at_1145 BLOC|complement(19860793..19860817) DBX|145409_at_1139 BLOC|complement(19860799..19860823) DBX|145409_at_1099 BLOC|complement(19861694..19861718) DBX|145409_at_1084 BLOC|complement(19861709..19861733) DBX|145409_at_1015 BLOC|complement(19861778..19861802) DBX|145409_at_971 BLOC|complement(19861822..19861846) DBX|145409_at_896 BLOC|complement(19861897..19861921) DBX|145409_at_796 BLOC|complement(19861997..19862021) DBX|145408_at_1305 BLOC|complement(19841031..19841055) DBX|145408_at_1287 BLOC|complement(19841049..19841073) DBX|145408_at_1263 BLOC|complement(19841073..19841097) DBX|145408_at_1216 BLOC|complement(19841120..19841144) } EVD { PRG|tblastx_masked DB|na_dbEST.insect CLA|EST DBX|BI504527 BLOC|complement(19840968..19841168) DBX|BI513775 BLOC|complement(19844270..19844518,19845052..19845219) } EVD { PRG|tblastxwrap_masked DB|na_scf_chunk_agambiae.fa CLA|DNA DT|20041008 DBX|AAAB01005239 BLOC|complement(19859034..19859111) DBX|AAAB01008986.1p77 BLOC|complement(19859025..19859114) DBX|AAAB01008944.1p14 BLOC|complement(19859037..19859114) DBX|AAAB01008980.1p88 BLOC|complement(19859037..19859120) DBX|AAAB01008847.1p6 BLOC|complement(19860639..19860806) DBX|AAAB01008817.1p2 BLOC|complement(19860639..19860809) DBX|AAAB01008817.1p3 BLOC|complement(19860651..19860812) DBX|AAAB01008799.1p12 BLOC|complement(19860660..19860812) DBX|AAAB01008859.1p94 BLOC|complement(19860645..19860815) DBX|AAAB01008846.1p36 BLOC|complement(19860651..19860818) DBX|AAAB01008799.1p13 BLOC|complement(19860639..19860827) DBX|AAAB01008898.1p28 BLOC|complement(19860636..19860860) DBX|AAAB01008966.1p6 BLOC|complement(19840968..19841054) DBX|AAAB01008846.1p3 BLOC|complement(19840968..19841093) DBX|AAAB01008859.1p94 BLOC|complement(19840968..19841102) DBX|AAAB01008807.1p60 BLOC|complement(19840968..19841123) DBX|AAAB01008898.1p27 BLOC|complement(19840962..19841168) DBX|AAAB01008898.1p27 BLOC|complement(19841267..19841395) DBX|AAAB01008898.1p28 BLOC|complement(19844261..19844347) DBX|AAAB01008898.1p28 BLOC|complement(19845043..19845321) DBX|AAAB01008898.1p28 BLOC|complement(19845391..19845504) DBX|AAAB01008823.1p11 BLOC|complement(19859028..19859105) DBX|AAAB01008817.1p6 BLOC|complement(19859031..19859105) DBX|AAAB01008834.1p6 BLOC|complement(19859037..19859105) DBX|AAAB01008944.1p9 BLOC|complement(19859028..19859108) DBX|AAAB01008944.1p13 BLOC|complement(19859037..19859108) DBX|AAAB01008482 BLOC|complement(19859034..19859111) } EVD { PRG|sim4 DB|na_dbEST.same.dmel CLA|EST DBX|RH36484.5prime BLOC|complement(19839583..19840267) DBX|RH26295.5prime BLOC|complement(19839605..19840267) DBX|RH25070.5prime BLOC|complement(19839692..19840267) DBX|RE06088:contig1 BLOC|complement(19847432..19847594,19847654..19847731) DBX|RE06088:contig2 BLOC|complement(19838617..19839251) DBX|RH26429.5prime BLOC|complement(19861058..19861780) DBX|RH46216.5prime BLOC|complement(19861095..19861780) DBX|RH23388.5prime BLOC|complement(19861123..19861780) DBX|RH32284.5prime BLOC|complement(19861151..19861780) DBX|RH25216.5prime BLOC|complement(19861168..19861780) DBX|RH58787.5prime BLOC|complement(19861216..19861780) DBX|RH13501.5prime BLOC|complement(19861246..19861780) DBX|GH11958.5prime BLOC|complement(19860677..19860832,19861688..19862130) } EVD { PRG|prosplign DB|aa_ncbi_other CLA|protein DT|20060124 DBX|AAX62923 BLOC|complement(19840968..19841167,19841278..19841378,19841567..19841658, |19842289..19842322,19842767..19843066,19844262..19844560,19845067..19845319, |19845392..19845501,19860642..19860905,19861080..19861148) DBX|NP_001006627 BLOC|complement(19844712..19844771,19844772..19844825,19844832..19844896, |19845021..19845319,19845392..19845501,19848438..19848464,19860669..19860791) DBX|NP_001006628 BLOC|complement(19844712..19844771,19844772..19844825,19844832..19844896, |19845021..19845319,19845392..19845501,19848438..19848464,19860669..19860791) DBX|NP_001006629 BLOC|complement(19844712..19844771,19844772..19844825,19844832..19844896, |19845021..19845319,19845392..19845501,19848438..19848464,19860669..19860791) DBX|NP_001006630 BLOC|complement(19844712..19844771,19844772..19844825,19844832..19844896, |19845021..19845319,19845392..19845501,19848438..19848464,19860669..19860791) DBX|NP_001006631 BLOC|complement(19844712..19844771,19844772..19844825,19844832..19844896, |19845021..19845319,19845392..19845501,19848438..19848464,19860669..19860791) DBX|NP_001006632 BLOC|complement(19844712..19844771,19844772..19844825,19844832..19844896, |19845021..19845319,19845392..19845501,19848438..19848464,19860669..19860791) DBX|NP_001006633 BLOC|complement(19844712..19844771,19844772..19844825,19844832..19844896, |19845021..19845319,19845392..19845501,19848438..19848464,19860669..19860791) DBX|NP_001024047 BLOC|complement(19840947..19841167,19841278..19841362,19841548..19841759, |19841795..19841892,19842791..19843038,19843189..19843358,19843644..19843782, |19844282..19844560,19845067..19845319,19845392..19845501,19860642..19860878) DBX|NP_001024048 BLOC|complement(19840947..19841167,19841278..19841362,19841548..19841759, |19841795..19841892,19842791..19843038,19843189..19843439,19843523..19843644, |19843784..19843957,19844262..19844560,19845067..19845319,19845392..19845501, |19860642..19860878) DBX|NP_001024235 BLOC|complement(19860188..19860244,19860257..19860349,19860660..19860854) DBX|NP_001024236 BLOC|complement(19860222..19860311,19860645..19860854) DBX|NP_001024335 BLOC|complement(19840804..19840840,19840960..19841167,19841278..19841353, |19843567..19843625,19844368..19844549,19845047..19845319,19845392..19845501, |19860642..19860886,19860965..19861094) DBX|NP_001024336 BLOC|complement(19840804..19840840,19840960..19841167,19841278..19841353, |19843567..19843625,19844368..19844549,19845047..19845319,19845392..19845501, |19860642..19860886,19860965..19861046) DBX|NP_001024337 BLOC|complement(19845244..19845319,19845392..19845501,19860642..19860886, |19860965..19861046) DBX|NP_001024338 BLOC|complement(19845244..19845319,19845392..19845501,19860642..19860886, |19860965..19861004) DBX|NP_001024339 BLOC|complement(19840804..19840840,19840960..19841167,19841278..19841353, |19842846..19842847,19842879..19842889,19844262..19844549,19845047..19845319, |19845392..19845501,19860642..19860886,19860965..19861094) DBX|NP_001024340 BLOC|complement(19840804..19840840,19840960..19841167,19841278..19841353, |19843567..19843625,19844368..19844549,19845047..19845319,19845392..19845501, |19860642..19860886,19860965..19861004) DBX|NP_001024522 BLOC|complement(19840929..19841167,19841278..19841383,19841468..19841563) DBX|NP_001024580 BLOC|complement(19840866..19841167,19841278..19841378,19841513..19841652) DBX|NP_001024907 BLOC|complement(19844581..19844640,19844851..19845042,19845070..19845319, |19845392..19845491,19849994..19850006,19860642..19860860) DBX|NP_001024908 BLOC|complement(19844850..19844921,19844931..19845014,19845070..19845319, |19845392..19845491,19849994..19850006,19860642..19860860) DBX|NP_001028252 BLOC|complement(19840585..19840660,19840969..19841167,19841278..19841371, |19841411..19841464,19841489..19841554,19841581..19841652) DBX|NP_055441 BLOC|complement(19840585..19840660,19840969..19841167,19841278..19841371, |19841411..19841464,19841489..19841554) } EVD { PRG|sim4 DB|na_transcript.dmel.RELEASE32 CLA|mRNA DT|20041008 DBX|CG17004-RB.32 BLOC|complement(19838619..19841167,19841278..19841378,19841567..19841701, |19842791..19843066,19844262..19844560,19845067..19845319,19845392..19845501, |19847039..19847594,19847654..19847731) DBX|CG9569-RA.32 BLOC|complement(19860336..19860416,19860642..19860832,19861688..19862804) } EVD { PRG|sim4 DB|na_transcript.dmel.RELEASE31 CLA|mRNA DT|20041008 DBX|CG17004-RB.31 BLOC|complement(19838619..19841167,19841278..19841378,19841567..19841701, |19842791..19843066,19844262..19844560,19845067..19845319,19845392..19845501, |19847039..19847594,19847654..19847731) DBX|CG9569-RA.31 BLOC|complement(19860336..19860416,19860642..19860832,19861688..19862804) } EVD { PRG|genscan_masked DB|dummy CLA|genscan_masked DT|20041008 BLOC|complement(19836574..19836940,19840960..19841167,19841278..19841378, |19841567..19841701,19842791..19843066,19844262..19844560,19845067..19845319, |19845392..19845501,19852360..19852392,19852532..19852748,19853549..19853729, |19856031..19856163,19860642..19860832,19861688..19862563,19862571..19862875, |19873295..19873474,19878499..19878723,19878844..19878959,19881131..19881241) } EVD { PRG|sim4tandem DB|na_gb.dmel CLA|so DT|20050823 DBX|AY150863 BLOC|complement(19840896..19841167,19841278..19841378,19841567..19841701, |19844262..19844560,19845067..19845319,19845392..19845501,19860642..19860832, |19861688..19862093) DBX|AY150864 BLOC|complement(19840896..19841167,19841278..19841378,19844262..19844560, |19845067..19845319,19845392..19845501,19860642..19860832,19861688..19862093) DBX|AY150862 BLOC|complement(19840896..19841167,19841278..19841378,19841567..19841701, |19842767..19843066,19844262..19844560,19845067..19845319,19845392..19845501, |19860642..19860832,19861688..19862093) } EVD { PRG|blastx_masked DB|aa_SPTR.insect CLA|protein DT|20041008 DBX|Q25188 BLOC|complement(19845052..19845321,19845391..19845495) DBX|BAD11157 BLOC|complement(19845052..19845321,19845391..19845495) DBX|Q9BMA9 BLOC|complement(19845052..19845321,19845391..19845495) } EVD { PRG|prosplign DB|aa_ncbi_dmel CLA|protein DT|20060123 DBX|AAT94423 BLOC|complement(19845091..19845138,19845229..19845288,19845397..19845432, |19845439..19845468,19848616..19848636,19858147..19858179) DBX|AAT94465 BLOC|complement(19840959..19841167,19841278..19841378,19841567..19841701, |19842791..19843066,19844262..19844560,19845067..19845319,19845392..19845504) } EVD { PRG|blastx_masked DB|aa_SPTR.rodent CLA|protein DT|20041008 DBX|Q7TT80 BLOC|complement(19845067..19845321,19845391..19845495) DBX|Q8BXS4 BLOC|complement(19845067..19845321,19845391..19845495) DBX|P51436 BLOC|complement(19845067..19845321,19845391..19845495) } EVD { PRG|augustus DB|dummy CLA|augustus DT|20050713 BLOC|complement(19840956..19841167,19841278..19841378,19841567..19841701, |19842791..19843063,19844262..19844560,19845067..19845319,19845392..19845501, |19860642..19860832,19861688..19862638,19866833..19866845) } EVD { PRG|blastx_masked DB|aa_SPTR.othvert CLA|protein DT|20041008 DBX|Q90WQ7 BLOC|complement(19845052..19845321,19845391..19845495) DBX|Q7T1A1 BLOC|complement(19845052..19845321,19845391..19845495) DBX|AAQ95734 BLOC|complement(19845067..19845321,19845391..19845495) } EVD { PRG|tblastxwrap_masked DB|na_baylorf1_scfchunk.dpse CLA|so DT|20041008 DBX|Contig7891_Contig7492A.fa-6 BLOC|complement(19840962..19841081) DBX|Contig7891_Contig7492A.fa-13 BLOC|complement(19840968..19841090) DBX|Contig1057_Contig498-2 BLOC|complement(19840962..19841102) DBX|Contig2105_Contig7229-2 BLOC|complement(19840959..19841168) DBX|Contig2105_Contig7229-2 BLOC|complement(19841272..19841379) DBX|Contig2105_Contig7229-2 BLOC|complement(19841566..19841703) DBX|Contig2105_Contig7229-2 BLOC|complement(19842898..19843068) DBX|Contig2105_Contig7229-2 BLOC|complement(19844250..19844417) DBX|Contig2105_Contig7229-2 BLOC|complement(19844261..19844563) DBX|Contig2105_Contig7229-2 BLOC|complement(19845058..19845321) DBX|Contig2105_Contig7229-2 BLOC|complement(19845356..19845463) DBX|Contig2105_Contig7229-2 BLOC|complement(19845391..19845507) DBX|Contig2105_Contig7229-2 BLOC|complement(19847594..19847680) DBX|Contig2105_Contig7229-2 BLOC|complement(19849619..19849738) DBX|Contig2105_Contig7229-2 BLOC|complement(19851595..19851753) DBX|Contig2105_Contig7229-2 BLOC|complement(19857267..19857359) DBX|Contig1413_Contig281-1 BLOC|complement(19859028..19859105) DBX|Contig6573_Contig4-1 BLOC|complement(19859016..19859108) DBX|Contig4922_Contig3818-1 BLOC|complement(19859034..19859108) DBX|Contig200_Contig5462-1 BLOC|complement(19859034..19859108) DBX|Contig1560_Contig5626-1 BLOC|complement(19859013..19859111) DBX|Contig3681_Contig434-12 BLOC|complement(19859037..19859111) DBX|Contig3681_Contig434-13 BLOC|complement(19859037..19859111) DBX|Contig2105_Contig7229-4 BLOC|complement(19859036..19859113) DBX|Contig6187_Contig3076-2 BLOC|complement(19859016..19859123) DBX|Contig2105_Contig7229-2 BLOC|complement(19860236..19860328) DBX|Contig3266_Contig6542-1 BLOC|complement(19860651..19860803) DBX|Contig143_Contig447-2 BLOC|complement(19860639..19860806) DBX|Contig1057_Contig498-2 BLOC|complement(19860639..19860815) DBX|Contig3447_Contig3977-1 BLOC|complement(19860615..19860827) DBX|Contig4374_Contig4847-7 BLOC|complement(19860660..19860827) DBX|Contig2105_Contig7229-2 BLOC|complement(19860636..19860836) DBX|Contig2105_Contig7229-2 BLOC|complement(19861785..19861985) DBX|Contig2105_Contig7229-2 BLOC|complement(19861959..19862228) } EVD { PRG|blastx_masked DB|aa_SPTR.dmel CLA|protein DT|20041008 DBX|Q8IS45 BLOC|complement(19840959..19841168) DBX|Q9W5X8 BLOC|complement(19840959..19841168) DBX|Q8IS44 BLOC|complement(19840959..19841168) DBX|Q8IS44 BLOC|complement(19841216..19841380,19841566..19841763) DBX|AAQ23530 BLOC|complement(19845061..19845321,19845391..19845468) DBX|AAN14180 BLOC|complement(19845061..19845321,19845391..19845468) DBX|Q24563 BLOC|complement(19845061..19845321,19845391..19845468) DBX|AAM49860 BLOC|complement(19845061..19845321,19845391..19845489) DBX|P20905 BLOC|complement(19845061..19845321,19845391..19845489) DBX|Q9VEG2 BLOC|complement(19845028..19845321,19845391..19845495) DBX|Q9VEG1 BLOC|complement(19845031..19845321,19845391..19845495) DBX|P22270 BLOC|complement(19845052..19845321,19845391..19845495) DBX|Q24038 BLOC|complement(19845070..19845495) DBX|Q9W5X8 BLOC|complement(19841216..19841380,19841566..19841703,19842793..19843092, |19844252..19844518,19845052..19845321,19845391..19845498) DBX|P48148 BLOC|complement(19854014..19854109) DBX|P48555 BLOC|complement(19857633..19857698) DBX|AAM50772 BLOC|complement(19857633..19857698) DBX|Q962I2 BLOC|complement(19857633..19857698) DBX|Q8IS43 BLOC|complement(19840959..19841168,19844237..19844518,19845052..19845321, |19845391..19845498,19860636..19860833,19861680..19861907) DBX|Q8IS45 BLOC|complement(19841216..19841380,19841566..19841703,19842742..19843092, |19844252..19844518,19845052..19845321,19845391..19845498,19860636..19860833, |19861680..19861907) DBX|Q8IS44 BLOC|complement(19844264..19844518,19845052..19845321,19845391..19845498, |19860636..19860833,19861680..19861907) DBX|Q9W5X7 BLOC|complement(19860624..19860833,19861680..19862804) } EVD { PRG|sim4 DB|na_dbEST.diff.dmel CLA|EST DBX|EK143438.5prime BLOC|complement(19839250..19839559) } EVD { PRG|splign DB|na_cDNA_ncbi CLA|cDNA DT|20050907 DBX|RE06088 BLOC|complement(19838614..19841167,19841278..19841378,19841567..19841701, |19842791..19843066,19844262..19844560,19845067..19845319,19845392..19845501, |19847039..19847594,19847654..19847731) } EVD { PRG|blastx_masked DB|aa_SPTR.worm CLA|protein DT|20041008 DBX|CAB02718 BLOC|complement(19845052..19845321,19845391..19845495) DBX|CAF31464 BLOC|complement(19845052..19845321,19845391..19845495) DBX|CAF31468 BLOC|complement(19845052..19845321,19845391..19845495) } EVD { PRG|blastx_masked DB|aa_SPTR.primate CLA|protein DT|20041008 DBX|Q8NGM5 BLOC|complement(19845067..19845321,19845391..19845495) DBX|P21917 BLOC|complement(19845067..19845321,19845391..19845495) DBX|Q7Z7Q5 BLOC|complement(19845067..19845321,19845391..19845495) } EVD { PRG|promoter DB|dummy CLA|promoter DT|20041008 BLOC|complement(19842244..19842245) } DBX|GB_protein:AAF45378.1 VERS|4.3 } # EOR GADR { RETE|ID 1 FBan0009575 GID 1 FBgn0031090 GSYM 1 Rab35 CGSYM 1 CG9575 ARM 1 X CLOC 1 19B3-19B3 SCAF 1 AE002611 TRREC 1 AALEN 1 201 ID|FBan0009575 SYM|CG9575 GENSR { GSYM|Rab35 ID|FBgn0031090 } ARM|X SCAF|AE002611 BLOC|complement(19990412..19993775) CLOCC|19B3-19B3 SQLEN|3364 GO|GTPase activity ; GO:0003924 |small GTPase mediated signal transduction ; GO:0007264 |DNA binding ; GO:0003677 |regulation of transcription, DNA-dependent ; GO:0006355 |signal transduction ; GO:0007165 |regulation of exocytosis ; GO:0017157 |two-component signal transduction system (phosphorelay) ; GO:0000160 |cytokinesis ; GO:0000910 |intracellular protein transport ; GO:0006886 |endocytosis ; GO:0006897 |GTP binding ; GO:0005525 ID2|FBan0009575 SYN|DmRab35 |DRab35 EST|EK249843 |EP13058 |EK059103 |EK017119 |EK193963 |EK252044 |EN15159 |EK194548 |SD11673 |EN00556 |SD25740 |SD24804 |SD19735 |SD10780 |EK231917 |SD25652 |EK157001 |LD28488 |LD47828 |LD28840 |RE30420 |RE48276 |RE45079 |RE07071 |LD34446 |LD28907 |LD23055 |RE09722 |LD36120 |LD22365 |LD40342 |LD08750 |LD35579 |LD38202 |LD34870 |RE02403 |RE05544 |LD05366 |LD48041 |LD48042 |LD40176 |LD39189 |RE56290 |RE24604 |RE13265 |LD21953 |LD15677 |LD04863 |LD26728 |LD43654 |RE46838 |RE05915 |RE04814 |RE22243 |RE12015 |LD20961 |RE06789 |RE11147 |RE07462 |RE06792 |RE64794 |RE15541 |RE64477 |RE23366 |RE54457 |RH12869 CDNA|LD21953 AFFY|154069_at CMT|comment=EST data support existence of multiple transcripts due |to variable use of 5' exons |comment=EST data support existence of multiple transcripts due |to variable use of poly-A sites DT|20040816 TRREC { NAM|Rab35-RA SYN|FlyBase:FBtr0070028 |FlyBase Annotation IDs:CG9575-RA |FlyBase:FBpp0070027 |FlyBase Annotation IDs:CG9575-PA |GB_protein:AAF45371.1 |FlyBase:FBgn0081870 |FlyBase Annotation IDs:GA21885 |Dpse\GA21885 AANAM|Rab35-PA SQLEN|2605 (-) AALEN|201 BLOC|complement(19990412..19991773,19991907..19992206,19992833..19993775) CDS|complement(19991523..19991773,19991907..19992206,19992833..19992884) CMT|comment=Range of putative ortholog from tblastn was extended |to cover the gene prediction DT|20020715 } EVD { PRG|blastx_masked DB|aa_SPTR.othinv CLA|protein DT|20041008 DBX|Q7QDA4 BLOC|complement(19991562..19991774,19991908..19992234) DBX|Q7QB74 BLOC|complement(19991577..19991774,19991908..19992234) DBX|Q01890 BLOC|complement(19991908..19992234) } EVD { PRG|sim4 DB|na_gadfly.dros.RELEASE2 CLA|mRNA DT|20041008 DBX|CT17720.2 BLOC|complement(19991323..19991773,19991907..19992206,19992833..19992884) } EVD { PRG|genie_masked DB|dummy CLA|genie_masked DT|20041008 BLOC|complement(19991520..19991773,19991907..19992206,19992833..19992884) } EVD { PRG|repeatmasker DB|dummy CLA|RepeatMasker:dummy DT|20041008 DBX|AY219709 BLOC|complement(19993156..19993263) } EVD { PRG|dmel_r3_to_dmel_r4_migration DB|dmel_r3_affy_oligos CLA|oligonucleotide DT|20050125 DBX|154069_at_555 BLOC|complement(19991559..19991583) DBX|154069_at_540 BLOC|complement(19991574..19991598) DBX|154069_at_504 BLOC|complement(19991610..19991634) DBX|154069_at_950 BLOC|complement(19991164..19991188) DBX|154069_at_941 BLOC|complement(19991173..19991197) DBX|154069_at_784 BLOC|complement(19991330..19991354) DBX|154069_at_770 BLOC|complement(19991344..19991368) DBX|154069_at_717 BLOC|complement(19991397..19991421) DBX|154069_at_706 BLOC|complement(19991408..19991432) DBX|154069_at_643 BLOC|complement(19991471..19991495) DBX|154069_at_625 BLOC|complement(19991489..19991513) DBX|154069_at_604 BLOC|complement(19991510..19991534) DBX|154069_at_575 BLOC|complement(19991539..19991563) DBX|154069_at_568 BLOC|complement(19991546..19991570) } EVD { PRG|tblastx_masked DB|na_dbEST.insect CLA|EST DBX|BX626912 BLOC|complement(19991562..19991774,19991908..19992234) DBX|BP182666 BLOC|complement(19991628..19991774,19991908..19992234) DBX|BM627551 BLOC|complement(19991959..19992234) } EVD { PRG|tblastxwrap_masked DB|na_scf_chunk_agambiae.fa CLA|DNA DT|20041008 DBX|AAAB01008859.1p3 BLOC|complement(19991580..19991777) DBX|AAAB01008859.1p3 BLOC|complement(19991902..19992033) DBX|AAAB01008880.1p12 BLOC|complement(19991938..19992075) DBX|AAAB01008807.1p102 BLOC|complement(19991938..19992135) DBX|AAAB01008847.1p6 BLOC|complement(19991941..19992135) DBX|AAAB01008963.1p6 BLOC|complement(19991908..19992138) DBX|AAAB01008823.1p24 BLOC|complement(19991938..19992192) DBX|AAAB01008834.1p15 BLOC|complement(19991908..19992207) DBX|AAAB01008859.1p3 BLOC|complement(19992031..19992207) DBX|AAAB01008987.1p10 BLOC|complement(19992001..19992210) DBX|AAAB01008960.1p10 BLOC|complement(19991932..19992213) } EVD { PRG|sim4 DB|na_dbEST.same.dmel CLA|EST DBX|LD28488.3prime BLOC|complement(19991074..19991588) DBX|LD47828.5prime BLOC|complement(19991386..19991773,19991907..19992143) DBX|LD28840:contig1 BLOC|complement(19991321..19991773,19991907..19992206,19992833..19992876) DBX|LD28840:contig2 BLOC|complement(19990416..19990886) DBX|RE30420.5prime BLOC|complement(19992174..19992206,19992833..19993483) DBX|RE48276.5prime BLOC|complement(19992999..19993543) DBX|RE45079.5prime BLOC|complement(19993105..19993543) DBX|RE07071.5prime BLOC|complement(19993079..19993632) DBX|LD34446.5prime BLOC|complement(19993045..19993681) DBX|LD28907.5prime BLOC|complement(19992944..19993719) DBX|LD23055.5prime BLOC|complement(19993199..19993737) DBX|RE09722.5prime BLOC|complement(19993170..19993755) DBX|LD36120.5prime BLOC|complement(19993134..19993759) DBX|LD22365.5prime BLOC|complement(19993106..19993762) DBX|LD40342.5prime BLOC|complement(19993187..19993762) DBX|LD08750.5prime BLOC|complement(19993233..19993762) DBX|LD35579.5prime BLOC|complement(19993297..19993762) DBX|LD38202.5prime BLOC|complement(19993297..19993762) DBX|LD34870.5prime BLOC|complement(19992938..19993763) DBX|RE02403.5prime BLOC|complement(19993408..19993764) DBX|RE05544.5prime BLOC|complement(19993521..19993764) DBX|LD05366.5prime BLOC|complement(19993205..19993767) DBX|LD48041.5prime BLOC|complement(19993107..19993771) DBX|LD48042.5prime BLOC|complement(19993447..19993771) DBX|LD40176.5prime BLOC|complement(19993118..19993772) DBX|LD39189.5prime BLOC|complement(19993201..19993772) DBX|RE56290.5prime BLOC|complement(19993118..19993773) DBX|RE24604.5prime BLOC|complement(19993127..19993773) DBX|RE13265.5prime BLOC|complement(19993201..19993773) DBX|LD21953.5prime BLOC|complement(19993351..19993775) DBX|LD15677.5prime BLOC|complement(19993226..19993776) DBX|LD04863.5prime BLOC|complement(19993333..19993777) DBX|LD26728.5prime BLOC|complement(19993105..19993782) DBX|LD43654.5prime BLOC|complement(19993174..19993788) DBX|RE46838.5prime BLOC|complement(19993118..19993790) DBX|RE05915.5prime BLOC|complement(19993150..19993790) DBX|RE04814.5prime BLOC|complement(19993199..19993790) DBX|RE22243.5prime BLOC|complement(19993303..19993790) DBX|RE12015.5prime BLOC|complement(19993309..19993790) DBX|LD20961.5prime BLOC|complement(19993367..19993790) DBX|RE06789.5prime BLOC|complement(19993513..19993791) DBX|RE11147.5prime BLOC|complement(19993147..19993795) DBX|RE07462.5prime BLOC|complement(19993226..19993795) DBX|RE06792.5prime BLOC|complement(19993295..19993795) DBX|RE64794.5prime BLOC|complement(19993295..19993795) DBX|RE15541.5prime BLOC|complement(19993281..19993796) DBX|RE64477.5prime BLOC|complement(19993141..19993800) DBX|RE23366.5prime BLOC|complement(19993297..19993802) DBX|RE54457.5prime BLOC|complement(19993296..19993805) DBX|RH12869.5prime BLOC|complement(19993568..19993805) } EVD { PRG|prosplign DB|aa_ncbi_other CLA|protein DT|20060123 DBX|AAS79340 BLOC|complement(19991574..19991773,19991907..19992234) } EVD { PRG|sim4 DB|na_transcript.dmel.RELEASE32 CLA|mRNA DT|20041008 DBX|CG9575-RA.32 BLOC|complement(19990412..19991773,19991907..19992206,19992833..19993775) } EVD { PRG|sim4 DB|na_transcript.dmel.RELEASE31 CLA|mRNA DT|20041008 DBX|CG9575-RA.31 BLOC|complement(19990412..19991773,19991907..19992206,19992833..19993775) } EVD { PRG|genscan_masked DB|dummy CLA|genscan_masked DT|20041008 BLOC|complement(19991520..19991773,19991907..19992206,19992833..19992884) } EVD { PRG|sim4tandem DB|na_gb.dmel CLA|cDNA DT|20050823 DBX|LD21953 BLOC|complement(19991021..19991773,19991907..19992206,19992833..19993775) } EVD { PRG|blastx_masked DB|aa_SPTR.insect CLA|protein DT|20041008 DBX|O16143 BLOC|complement(19991908..19992234) DBX|AAR10050 BLOC|complement(19991908..19992234) DBX|AAR09930 BLOC|complement(19991914..19992234) } EVD { PRG|blastx_masked DB|aa_SPTR.rodent CLA|protein DT|20041008 DBX|AAH56466 BLOC|complement(19991556..19991774,19991908..19992234) DBX|Q9D1G1 BLOC|complement(19991595..19991774,19991908..19992234) DBX|P10536 BLOC|complement(19991595..19991774,19991908..19992234) } EVD { PRG|augustus DB|dummy CLA|augustus DT|20050713 BLOC|complement(19991520..19991773,19991907..19992206,19992833..19992884) } EVD { PRG|blastx_masked DB|aa_SPTR.othvert CLA|protein DT|20041008 DBX|Q8AVL2 BLOC|complement(19991556..19991774,19991908..19992234) DBX|AAH57747 BLOC|complement(19991556..19991774,19991908..19992234) DBX|AAH61434 BLOC|complement(19991556..19991774,19991908..19992234) } EVD { PRG|tblastxwrap_masked DB|na_baylorf1_scfchunk.dpse CLA|so DT|20041008 DBX|Contig2105_Contig7229-2 BLOC|complement(19991553..19991777) DBX|Contig2105_Contig7229-3 BLOC|complement(19991553..19991777) DBX|Contig143_Contig447-5 BLOC|complement(19991932..19992135) DBX|Contig2105_Contig7229-3 BLOC|complement(19991941..19992147) DBX|Contig7000_Contig4498-2 BLOC|complement(19991926..19992195) DBX|Contig284_Contig6045-7 BLOC|complement(19991938..19992204) DBX|Contig3447_Contig3977-2 BLOC|complement(19991908..19992207) DBX|Contig1277_Contig4006-2 BLOC|complement(19991938..19992210) DBX|Contig1277_Contig4006-1 BLOC|complement(19991938..19992210) DBX|Contig6187_Contig3076-1 BLOC|complement(19991938..19992210) DBX|Contig2105_Contig7229-2 BLOC|complement(19991887..19992213) DBX|Contig2105_Contig7229-3 BLOC|complement(19991887..19992213) } EVD { PRG|blastx_masked DB|aa_SPTR.dmel CLA|protein DT|20041008 DBX|O18339 BLOC|complement(19991565..19991774,19991938..19992234) DBX|O18332 BLOC|complement(19991577..19991774,19991908..19992234) DBX|AAM68480 BLOC|complement(19991580..19991774,19991944..19992234) DBX|Q9V3L5 BLOC|complement(19991580..19991774,19991944..19992234) DBX|O18333 BLOC|complement(19991616..19991774,19991905..19992234) DBX|Q9U5D5 BLOC|complement(19991616..19991774,19991905..19992234) DBX|O18335 BLOC|complement(19991622..19991774,19991926..19992234) DBX|Q9V3I2 BLOC|complement(19991622..19991771,19991941..19992234) DBX|Q8IGH2 BLOC|complement(19991622..19991774,19991926..19992234) DBX|Q9VM50 BLOC|complement(19991905..19992234) DBX|O18334 BLOC|complement(19991905..19992234) DBX|O15971 BLOC|complement(19991905..19992234) DBX|Q9W2V3 BLOC|complement(19991908..19992234) DBX|Q8IN36 BLOC|complement(19991908..19992234) DBX|BAD07037 BLOC|complement(19991938..19992234) DBX|P25228 BLOC|complement(19991938..19992234) DBX|Q8IRK8 BLOC|complement(19991610..19991774,19991929..19992237) DBX|Q8IRK9 BLOC|complement(19991610..19991774,19991929..19992237) DBX|Q9VZ47 BLOC|complement(19991908..19992237) DBX|Q9W2S9 BLOC|complement(19991908..19992237) DBX|Q9VNG6 BLOC|complement(19991586..19991774,19991908..19992246) DBX|Q8SYS5 BLOC|complement(19991911..19992249) DBX|Q9W3Q0 BLOC|complement(19991926..19992249) DBX|Q9VYM8 BLOC|complement(19991610..19991774,19991908..19992204,19992834..19992872) DBX|Q95RQ2 BLOC|complement(19991610..19991774,19991908..19992204,19992834..19992872) DBX|Q8IR80 BLOC|complement(19991610..19991774,19991908..19992204,19992834..19992872) DBX|Q9W585 BLOC|complement(19991932..19992210,19992831..19992872) DBX|BAD07036 BLOC|complement(19991932..19992210,19992831..19992872) DBX|Q95RH7 BLOC|complement(19991553..19991774,19991908..19992096) DBX|Q7PLE8 BLOC|complement(19991818..19992171) DBX|Q8MRG8 BLOC|complement(19991818..19992204) DBX|Q7PLE9 BLOC|complement(19991818..19992204) DBX|Q9W0A7 BLOC|complement(19991935..19992204) DBX|Q9VIW6 BLOC|complement(19991625..19991804,19991923..19992207) DBX|Q9V3C2 BLOC|complement(19991830..19992207) DBX|O18336 BLOC|complement(19991935..19992207) DBX|Q86BK7 BLOC|complement(19991935..19992207) DBX|Q8T046 BLOC|complement(19991935..19992207) DBX|Q86BK8 BLOC|complement(19991935..19992207) DBX|O76742 BLOC|complement(19991616..19991789,19991944..19992210) DBX|Q95R32 BLOC|complement(19991622..19991774,19991905..19992210) DBX|Q9VP48 BLOC|complement(19991622..19991774,19991905..19992210) DBX|Q9VC31 BLOC|complement(19991905..19992210) DBX|O18337 BLOC|complement(19991926..19992210) DBX|Q9W4A0 BLOC|complement(19991926..19992210) DBX|O76901 BLOC|complement(19991932..19992210) DBX|Q9W5X0 BLOC|complement(19991553..19991774,19991908..19992234) DBX|Q8IR98 BLOC|complement(19991553..19991774,19991938..19992234) DBX|BAD07038 BLOC|complement(19991559..19991774,19991905..19992234) DBX|O18338 BLOC|complement(19991559..19991774,19991905..19992234) } EVD { PRG|sim4 DB|na_dbEST.diff.dmel CLA|EST DBX|EK249843.5prime BLOC|complement(19989999..19990448) DBX|EP13058.3prime BLOC|complement(19990406..19990940) DBX|EK059103.3prime BLOC|complement(19990868..19991198) DBX|EK017119.3prime BLOC|complement(19990987..19991198) DBX|EK193963.5prime BLOC|complement(19990986..19991433) DBX|EK252044.5prime BLOC|complement(19991590..19991773,19991907..19992108) DBX|EN15159.5prime BLOC|complement(19992278..19992465,19992833..19992956) DBX|EK194548.5prime BLOC|complement(19992931..19993174) DBX|SD11673.5prime BLOC|complement(19993007..19993222) DBX|EN00556.5prime BLOC|complement(19993157..19993606) DBX|SD25740.5prime BLOC|complement(19993199..19993762) DBX|SD24804.5prime BLOC|complement(19993297..19993777) DBX|SD19735.5prime BLOC|complement(19993105..19993786) DBX|SD10780.5prime BLOC|complement(19993296..19993786) DBX|EK231917.5prime BLOC|complement(19993294..19993787) DBX|SD25652.5prime BLOC|complement(19993136..19993791) DBX|EK157001.5prime BLOC|complement(19993444..19993802) } EVD { PRG|blastx_masked DB|aa_SPTR.plant CLA|protein DT|20041008 DBX|Q39571 BLOC|complement(19991595..19991774,19991908..19992234) DBX|Q41338 BLOC|complement(19991860..19992234) DBX|Q40569 BLOC|complement(19991908..19992234) } EVD { PRG|blastx_masked DB|aa_SPTR.worm CLA|protein DT|20041008 DBX|Q9U2C3 BLOC|complement(19991577..19991774,19991908..19992234) DBX|BAD07034 BLOC|complement(19991833..19992234) DBX|Q9UAQ6 BLOC|complement(19991908..19992234) } EVD { PRG|blastx_masked DB|aa_SPTR.primate CLA|protein DT|20041008 DBX|Q15286 BLOC|complement(19991556..19991774,19991908..19992234) DBX|Q9H0U4 BLOC|complement(19991908..19992234) DBX|AAP97212 BLOC|complement(19991908..19992234) } EVD { PRG|promoter DB|dummy CLA|promoter DT|20041008 BLOC|complement(19990984..19990985) BLOC|complement(19993481..19993482) } EVD { PRG|blastx_masked DB|aa_SPTR.yeast CLA|protein DT|20041008 DBX|P38555 BLOC|complement(19991643..19991774,19991926..19992234) DBX|P01123 BLOC|complement(19991905..19992234) DBX|P07560 BLOC|complement(19991622..19991774,19991926..19992210,19992831..19992872) } VERS|4.3 } # EOR GADR { RETE|ID 1 FBan0009570 GID 1 FBgn0031085 GSYM 1 CG9570 CGSYM 1 CG9570 ARM 1 X CLOC 1 19A6-19A6 SCAF 1 AE002611 TRREC 1 AALEN 1 210 ID|FBan0009570 SYM|CG9570 GENSR { GSYM|CG9570 ID|FBgn0031085 } ARM|X SCAF|AE002611 BLOC|19885231..19886459 CLOCC|19A6-19A6 SQLEN|1229 ID2|FBan0009570 EST|AT03539 |AT03527 |AT07201 |AT01019 |AT08636 |AT14576 |AT30653 |AT11984 |AT20880 |bs50h06 |AT22617 |AT06472 |AT01137 |AT04283 |AT31831 |AT10623 |AT30495 |AT18528 |AT18906 |AT09890 |AT11727 |AT31303 |AT16669 |AT10685 |AT03587 |AT08370 |AT28538 |AT21663 |AT22545 CDNA|AT16669 AFFY|145410_at DT|20031201 TRREC { NAM|CG9570-RA SYN|FlyBase:FBtr0070002 |FlyBase:FBpp0070001 |GB_protein:AAF45383.1 |FlyBase:FBgn0081868 |FlyBase Annotation IDs:GA21883 |Dpse\GA21883 AANAM|CG9570-PA SQLEN|1229 AALEN|210 BLOC|19885231..19886459 CDS|19885393..19886022 CMT|comment=Range of putative ortholog from tblastn was extended |to cover the gene prediction DT|20020704 } EVD { PRG|sim4 DB|na_transcript.dmel.RELEASE31 CLA|mRNA DT|20041008 DBX|CG9570-RA.31 BLOC|19885231..19886459 } EVD { PRG|bdgp_unknown_clonelocator DB|scaffoldBACs CLA|BAC DT|20041221 DBX|BACR11H15 BLOC|19831670..20009622 DBX|BDGP:D1452 , BACR39I01 BLOC|19729764..19890910 } EVD { PRG|genscan_masked DB|dummy CLA|genscan_masked DT|20041008 BLOC|19885393..19886025 } EVD { PRG|sim4tandem DB|na_gb.dmel CLA|cDNA DT|20050823 DBX|AT16669 BLOC|19885231..19886459 } EVD { PRG|sim4 DB|na_gadfly.dros.RELEASE2 CLA|mRNA DT|20041008 DBX|CT17340.2 BLOC|19885393..19886051 } EVD { PRG|genie_masked DB|dummy CLA|genie_masked DT|20041008 BLOC|19885393..19886025 } EVD { PRG|augustus DB|dummy CLA|augustus DT|20050713 BLOC|19885393..19886025 } EVD { PRG|tblastxwrap_masked DB|na_baylorf1_scfchunk.dpse CLA|so DT|20041008 DBX|Contig7891_Contig7492A.fa-4 BLOC|19885384..19885962 DBX|Contig2105_Contig7229-2 BLOC|19885474..19885932 } EVD { PRG|blastx_masked DB|aa_SPTR.dmel CLA|protein DT|20041008 DBX|Q9W5X6 BLOC|19885393..19886022 } EVD { PRG|sim4 DB|na_dbEST.diff.dmel CLA|EST DBX|AT03539.5prime BLOC|19885253..19885919 DBX|AT03527.5prime BLOC|19885253..19885988 DBX|AT07201.5prime BLOC|19885273..19885849 DBX|AT01019:contig1 BLOC|19885253..19886456 DBX|AT08636.5prime BLOC|19885278..19885869 DBX|AT14576.5prime BLOC|19885257..19885804 DBX|AT30653.5prime BLOC|19885285..19885937 DBX|AT11984.5prime BLOC|19885258..19885610 DBX|AT20880.5prime BLOC|19885287..19885954 DBX|bs50h06.y1 BLOC|19885260..19885806 DBX|AT22617.5prime BLOC|19885302..19885866 DBX|AT06472.5prime BLOC|19885261..19885781 DBX|AT01137:contig1 BLOC|19885303..19885672 DBX|AT01137:contig2 BLOC|19886051..19886451 DBX|AT04283.5prime BLOC|19885264..19885954 DBX|AT31831.5prime BLOC|19885264..19885969 DBX|AT10623.5prime BLOC|19885266..19885869 DBX|AT30495.5prime BLOC|19885266..19885879 DBX|AT18528.5prime BLOC|19885268..19885655 DBX|AT18906.5prime BLOC|19885268..19886000 DBX|AT09890.5prime BLOC|19885268..19886017 DBX|AT11727.5prime BLOC|19885270..19885474 DBX|AT31303.5prime BLOC|19885270..19885501 DBX|AT16669:contig1 BLOC|19885231..19886456 DBX|AT10685.5prime BLOC|19885270..19885873 DBX|AT03587.5prime BLOC|19885253..19885803 DBX|AT08370.5prime BLOC|19885270..19885980 DBX|AT28538.5prime BLOC|19885253..19885831 DBX|AT21663.5prime BLOC|19885272..19885731 DBX|AT22545.5prime BLOC|19885272..19885805 } EVD { PRG|dmel_r3_to_dmel_r4_migration DB|dmel_r3_affy_oligos CLA|oligonucleotide DT|20050125 DBX|145410_at_82 BLOC|19885462..19885486 DBX|145410_at_145 BLOC|19885525..19885549 DBX|145410_at_176 BLOC|19885556..19885580 DBX|145410_at_218 BLOC|19885598..19885622 DBX|145410_at_240 BLOC|19885620..19885644 DBX|145410_at_256 BLOC|19885636..19885660 DBX|145410_at_275 BLOC|19885655..19885679 DBX|145410_at_316 BLOC|19885696..19885720 DBX|145410_at_344 BLOC|19885724..19885748 DBX|145410_at_369 BLOC|19885749..19885773 DBX|145410_at_440 BLOC|19885820..19885844 DBX|145410_at_464 BLOC|19885844..19885868 DBX|145410_at_476 BLOC|19885856..19885880 DBX|145410_at_518 BLOC|19885898..19885922 } EVD { PRG|sim4 DB|na_transcript.dmel.RELEASE32 CLA|mRNA DT|20041008 DBX|CG9570-RA.32 BLOC|19885231..19886459 } VERS|4.3 } # EOR GADR { RETE|ID 1 FBan0009572 GID 1 FBgn0031089 GSYM 1 CG9572 CGSYM 1 CG9572 ARM 1 X CLOC 1 19B3-19B3 SCAF 1 AE002611 TRREC 1 AALEN 1 441 ID|FBan0009572 SYM|CG9572 GENSR { GSYM|CG9572 ID|FBgn0031089 } ARM|X SCAF|AE002611 BLOC|19982068..19989245 CLOCC|19B3-19B3 SQLEN|7178 ID2|FBan0009572 SYN|CT17356 EST|EK200722 |CK00486 |EK220213 |RE50921 |LP13770 |GH15379 |GH18407 |GH07746 |GH16293 |GH06658 |HL03010 AFFY|145414_at DT|20040816 TRREC { NAM|CG9572-RA SYN|FlyBase:FBtr0070006 |FlyBase:FBpp0070005 |GB_protein:AAF45369.1 |FlyBase:FBgn0081869 |FlyBase Annotation IDs:GA21884 |Dpse\GA21884 AANAM|CG9572-PA SQLEN|1454 AALEN|441 BLOC|join(19982068..19982198,19983999..19984173,19984535..19984773, |19984882..19984963,19988135..19988751,19989036..19989245) CDS|join(19982196..19982198,19983999..19984173,19984535..19984773, |19984882..19984963,19988135..19988751,19989036..19989242) CMT|comment=Range of putative ortholog from tblastn was extended |to cover the gene prediction DT|20020704 } EVD { PRG|bdgp_unknown_clonelocator DB|scaffoldBACs CLA|BAC DT|20041221 DBX|BACR11H15 BLOC|19831670..20009622 } EVD { PRG|blastx_masked DB|aa_SPTR.othinv CLA|protein DT|20041008 DBX|Q7Q113 BLOC|join(19984483..19984950,19984879..19984995,19988053..19988709) DBX|Q7Q114 BLOC|join(19984555..19984935,19984843..19984947,19988026..19988754) DBX|Q7Q1J6 BLOC|19988089..19988769 } EVD { PRG|sim4 DB|na_gadfly.dros.RELEASE2 CLA|mRNA DT|20041008 DBX|CT17356.2 BLOC|join(19982084..19982198,19983999..19984173,19984535..19984773, |19984882..19984963,19988135..19988751,19989036..19989245) } EVD { PRG|genie_masked DB|dummy CLA|genie_masked DT|20041008 BLOC|join(19983801..19983815,19983999..19984232,19984486..19984773, |19984882..19985034) BLOC|join(19987825..19987873,19988135..19988751,19989036..19989245) } EVD { PRG|dmel_r3_to_dmel_r4_migration DB|dmel_r3_affy_oligos CLA|oligonucleotide DT|20050125 DBX|145414_at_1361 BLOC|19989156..19989180 DBX|145414_at_1394 BLOC|19989189..19989213 DBX|145414_at_855 BLOC|19988366..19988390 DBX|145414_at_878 BLOC|19988389..19988413 DBX|145414_at_922 BLOC|19988433..19988457 DBX|145414_at_964 BLOC|19988475..19988499 DBX|145414_at_985 BLOC|19988496..19988520 DBX|145414_at_1062 BLOC|19988573..19988597 DBX|145414_at_1092 BLOC|19988603..19988627 DBX|145414_at_1107 BLOC|19988618..19988642 DBX|145414_at_1246 BLOC|19989041..19989065 DBX|145414_at_1248 BLOC|19989043..19989067 DBX|145414_at_1275 BLOC|19989070..19989094 DBX|145414_at_1328 BLOC|19989123..19989147 } EVD { PRG|tblastx_masked DB|na_dbEST.insect CLA|EST DBX|BX614633 BLOC|19988134..19988718 DBX|BX612588 BLOC|19988134..19988742 DBX|BX626583 BLOC|join(19988203..19988751,19989033..19989188) } EVD { PRG|tblastxwrap_masked DB|na_scf_chunk_agambiae.fa CLA|DNA DT|20041008 DBX|AAAB01008980.1p118 BLOC|19989024..19989206 DBX|AAAB01008980.1p119 BLOC|19989024..19989206 DBX|AAAB01008980.1p118 BLOC|19989024..19989227 DBX|AAAB01008859.1p3 BLOC|19989033..19989128 DBX|AAAB01008980.1p118 BLOC|19989039..19989209 DBX|AAAB01008980.1p119 BLOC|19989039..19989209 DBX|AAAB01008980.1p118 BLOC|19989039..19989230 DBX|AAAB01008980.1p119 BLOC|19989063..19989209 DBX|AAAB01008859.1p3 BLOC|19989126..19989242 DBX|AAAB01008859.1p3 BLOC|19984552..19984779 DBX|AAAB01008980.1p118 BLOC|19984555..19984767 DBX|AAAB01008980.1p119 BLOC|19984609..19984743 DBX|AAAB01008859.1p3 BLOC|19988134..19988226 DBX|AAAB01008980.1p118 BLOC|19988137..19988295 DBX|AAAB01008980.1p118 BLOC|19988137..19988355 DBX|AAAB01008980.1p118 BLOC|19988143..19988352 DBX|AAAB01008980.1p118 BLOC|19988143..19988367 DBX|AAAB01008980.1p118 BLOC|19988143..19988367 DBX|AAAB01008980.1p119 BLOC|19988143..19988367 DBX|AAAB01008859.1p3 BLOC|19988281..19988760 DBX|AAAB01008980.1p119 BLOC|19988332..19988454 DBX|AAAB01008980.1p118 BLOC|19988470..19988607 DBX|AAAB01008980.1p118 BLOC|19988470..19988607 DBX|AAAB01008980.1p119 BLOC|19988470..19988607 DBX|AAAB01008980.1p119 BLOC|19988470..19988619 DBX|AAAB01008980.1p118 BLOC|19988470..19988625 DBX|AAAB01008980.1p119 BLOC|19988470..19988625 DBX|AAAB01008980.1p118 BLOC|19988470..19988649 DBX|AAAB01008980.1p119 BLOC|19988473..19988703 DBX|AAAB01008980.1p118 BLOC|19989024..19989206 } EVD { PRG|sim4 DB|na_dbEST.same.dmel CLA|EST DBX|RE50921.5prime BLOC|join(19982068..19982198,19983999..19984173,19984535..19984710) DBX|LP13770.5prime BLOC|join(19982076..19982198,19983999..19984173,19984535..19984773, |19984882..19984963,19988135..19988197) DBX|GH15379.5prime BLOC|join(19982084..19982198,19983999..19984173,19984535..19984773) DBX|GH18407.5prime BLOC|join(19982084..19982198,19983999..19984173,19984535..19984774) DBX|GH07746.5prime BLOC|join(19982086..19982198,19984002..19984173,19984535..19984773, |19984882..19984949) DBX|GH16293.5prime BLOC|join(19982086..19982198,19983999..19984173,19984535..19984773, |19984882..19984961) DBX|GH06658.5prime BLOC|join(19982093..19982198,19983999..19984173,19984535..19984773, |19984882..19984956) DBX|HL03010.5prime BLOC|join(19984020..19984173,19984535..19984773,19984882..19984963, |19988137..19988190) } EVD { PRG|sim4 DB|na_transcript.dmel.RELEASE32 CLA|mRNA DT|20041008 DBX|CG9572-RA.32 BLOC|join(19982068..19982198,19983999..19984173,19984535..19984773, |19984882..19984963,19988135..19988751,19989036..19989245) } EVD { PRG|sim4 DB|na_transcript.dmel.RELEASE31 CLA|mRNA DT|20041008 DBX|CG9572-RA.31 BLOC|join(19982068..19982198,19983999..19984173,19984535..19984773, |19984882..19984963,19988135..19988751,19989036..19989245) } EVD { PRG|genscan_masked DB|dummy CLA|genscan_masked DT|20041008 BLOC|join(19982196..19982198,19983999..19984173,19984535..19984773, |19984882..19984963,19988135..19988751,19989036..19989245) } EVD { PRG|blastx_masked DB|aa_SPTR.insect CLA|protein DT|20041008 DBX|Q7PR44 BLOC|19984450..19984971 DBX|Q7PJX6 BLOC|join(19984483..19984950,19984879..19984995,19988053..19988709) DBX|Q7PR44 BLOC|join(19988098..19988751,19989033..19989242) } EVD { PRG|blastx_masked DB|aa_SPTR.rodent CLA|protein DT|20041008 DBX|AAH58571 BLOC|19988146..19988745 } EVD { PRG|augustus DB|dummy CLA|augustus DT|20050713 BLOC|join(19980661..19980681,19983999..19984062,19984535..19984773, |19984882..19984963,19988135..19988751,19989036..19989245) } EVD { PRG|repeat_runner_seg DB|dummy CLA|repeat_runner_seg DT|20041008 BLOC|19988128..19988753 } EVD { PRG|tblastxwrap_masked DB|na_baylorf1_scfchunk.dpse CLA|so DT|20041008 DBX|Contig2105_Contig7229-3 BLOC|19983996..19984226 DBX|Contig2105_Contig7229-2 BLOC|19983996..19984226 DBX|Contig2105_Contig7229-3 BLOC|19984504..19984782 DBX|Contig2105_Contig7229-2 BLOC|19984504..19984782 DBX|Contig5770_Contig924-1 BLOC|19984609..19984740 DBX|Contig5770_Contig924-1 BLOC|19984609..19984770 DBX|Contig2105_Contig7229-3 BLOC|19984879..19984986 DBX|Contig2105_Contig7229-2 BLOC|19984879..19984986 DBX|Contig2105_Contig7229-3 BLOC|19988107..19988301 DBX|Contig2105_Contig7229-2 BLOC|19988107..19988301 DBX|Contig5770_Contig924-1 BLOC|19988125..19988430 DBX|Contig5770_Contig924-1 BLOC|19988137..19988355 DBX|Contig5770_Contig924-1 BLOC|19988137..19988367 DBX|Contig5770_Contig924-1 BLOC|19988137..19988367 DBX|Contig5770_Contig924-1 BLOC|19988143..19988367 DBX|Contig2105_Contig7229-3 BLOC|19988299..19988757 DBX|Contig2105_Contig7229-2 BLOC|19988299..19988757 DBX|Contig5770_Contig924-1 BLOC|19988470..19988745 DBX|Contig5770_Contig924-1 BLOC|19989024..19989206 DBX|Contig5770_Contig924-1 BLOC|19989024..19989209 DBX|Contig5770_Contig924-1 BLOC|19989024..19989212 DBX|Contig2105_Contig7229-3 BLOC|19989036..19989242 DBX|Contig2105_Contig7229-2 BLOC|19989036..19989242 DBX|Contig5770_Contig924-1 BLOC|19989039..19989206 DBX|Contig5770_Contig924-1 BLOC|19989039..19989206 DBX|Contig5770_Contig924-1 BLOC|19989039..19989209 DBX|Contig5770_Contig924-1 BLOC|19989039..19989209 DBX|Contig5770_Contig924-1 BLOC|19989039..19989236 } EVD { PRG|blastx_masked DB|aa_SPTR.othvert CLA|protein DT|20041008 DBX|Q95LN0 BLOC|19988074..19988727 } EVD { PRG|sim4 DB|na_dbEST.diff.dmel CLA|EST DBX|EK200722.5prime BLOC|join(19982062..19982198,19983999..19984173,19984535..19984722) DBX|CK00486.3prime BLOC|19987945..19988273 DBX|EK220213.5prime BLOC|19988177..19988594 } EVD { PRG|blastx_masked DB|aa_SPTR.dmel CLA|protein DT|20041008 DBX|Q9W5X1 BLOC|join(19984047..19984172,19984519..19984971) DBX|AAN10358 BLOC|19984465..19984947 DBX|AAN10358 BLOC|19984465..19984947 DBX|AAN10358 BLOC|19984465..19984995 DBX|AAN10358 BLOC|join(19984465..19984998,19984474..19985049) DBX|AAN10358 BLOC|19984483..19984986 DBX|AAN10358 BLOC|19984483..19985007 DBX|AAN10358 BLOC|19984555..19984716 DBX|AAN10358 BLOC|19984555..19984719 DBX|Q9W5X1 BLOC|19984555..19984770 DBX|AAN10358 BLOC|19984555..19984779 DBX|AAN10358 BLOC|19984555..19984947 DBX|AAN10358 BLOC|19984555..19984971 DBX|AAN10358 BLOC|19984555..19984977 DBX|AAN10358 BLOC|19984555..19985001 DBX|AAN10358 BLOC|join(19984555..19984812,19989042..19989209) DBX|P07207 BLOC|19988134..19988775 DBX|AAN10358 BLOC|19988134..19988775 DBX|Q9W5X1 BLOC|join(19988134..19988775,19989033..19989242) DBX|AAN10358 BLOC|19988137..19988424 DBX|Q9U3W7 BLOC|join(19988143..19988802,19989024..19989227) DBX|AAN10358 BLOC|19988158..19988601 DBX|AAN10358 BLOC|19988158..19988763 DBX|AAN10358 BLOC|19988332..19988664 DBX|AAN10358 BLOC|19989027..19989206 DBX|AAN10358 BLOC|19989027..19989215 DBX|AAN10358 BLOC|19989027..19989227 DBX|AAN10358 BLOC|19989027..19989293 DBX|AAN10358 BLOC|19989027..19989377 } EVD { PRG|promoter DB|dummy CLA|promoter DT|20041008 BLOC|19982072..19982073 } VERS|4.3 } # EOR GADR { RETE|ID 1 FBan0032826 GID 1 FBgn0052826 GSYM 1 CR32826 CGSYM 1 CR32826 CLA 1 tRNA ARM 1 X CLOC 1 19A4-19A4 SCAF 1 AE002611 TRREC 1 ID|FBan0032826 SYM|CR32826 GENSR { GSYM|CR32826 ID|FBgn0052826 } CLA|tRNA ARM|X SCAF|AE002611 BLOC|19859036..19859107 CLOCC|19A4-19A4 SQLEN|72 ID2|FBgn0060115 SYN|AE002611.trna1-ProCGG |CG32826 |tRNA:P:CGG:AE002611 DT|20031201 TRREC { NAM|CR32826-RA SYN|FlyBase:FBtr0070001 SQLEN|72 BLOC|19859036..19859107 DT|20020704 } EVD { PRG|bdgp_unknown_clonelocator DB|scaffoldBACs CLA|BAC DT|20041221 DBX|BACR39I01 BLOC|19729764..19890910 DBX|BACR11H15 BLOC|19831670..20009622 } EVD { PRG|tRNAscan-SE DB|dummy CLA|tRNAscan-SE DT|20041008 BLOC|19859036..19859107 } EVD { PRG|tblastxwrap_masked DB|na_scf_chunk_agambiae.fa CLA|DNA DT|20041008 DBX|AAAB01008960.1p18 BLOC|19858986..19859111 DBX|AAAB01008834.1p6 BLOC|19858989..19859108 DBX|AAAB01008817.1p6 BLOC|19858992..19859111 } EVD { PRG|tblastxwrap_masked DB|na_baylorf1_scfchunk.dpse CLA|so DT|20041008 DBX|Contig2105_Contig7229-4 BLOC|19859037..19859153 } VERS|4.3 } # EOR GADR { RETE|ID 1 FBan0018859 GID 1 FBgn0041626 GSYM 1 Or19a CGSYM 1 CG18859 ARM 1 X CLOC 1 19B3-19B3 SCAF 1 AE002611 TRREC 1 AALEN 1 387 ID|FBan0018859 SYM|CG18859 GENSR { GSYM|Or19a ID|FBgn0041626 } ARM|X SCAF|AE002611 BLOC|complement(19975756..19977125) CLOCC|19B3-19B3 SQLEN|1370 GO|cell-cell signaling ; GO:0007267 ID2|FBan0018859 SYN|19A.1 |DOR37 DT|20031201 TRREC { NAM|Or19a-RB SYN|FlyBase:FBtr0070029 |FlyBase Annotation IDs:CG18859-RB |FlyBase:FBpp0070028 |FlyBase Annotation IDs:CG18859-PB |GB_protein:AAG22450.2 |FlyBase:FBgn0075129 |FlyBase Annotation IDs:GA15104 |Dpse\GA15104 AANAM|Or19a-PB SQLEN|1164 (-) AALEN|387 BLOC|complement(19975756..19975821,19975875..19976235,19976389..19977125) CDS|complement(19975759..19975821,19975875..19976235,19976389..19977125) DT|20020704 } EVD { PRG|sim4 DB|na_transcript.dmel.RELEASE31 CLA|mRNA DT|20041008 DBX|CG18859-RB.31 BLOC|complement(19975756..19975821,19975875..19976235,19976389..19977125) } EVD { PRG|genscan_masked DB|dummy CLA|genscan_masked DT|20041008 BLOC|complement(19973774..19973978,19974135..19974287,19975150..19975256, |19975875..19976235,19976389..19977125) } EVD { PRG|sim4 DB|na_gadfly.dros.RELEASE2 CLA|mRNA DT|20041008 DBX|CT42744.2 BLOC|complement(19973774..19973978,19974135..19974287,19975150..19975256, |19975875..19976235,19976389..19977125) } EVD { PRG|genie_masked DB|dummy CLA|genie_masked DT|20041008 BLOC|complement(19975756..19975821,19975875..19976235,19976389..19977125) } EVD { PRG|augustus DB|dummy CLA|augustus DT|20050713 BLOC|complement(19975756..19975821,19975875..19976235,19976389..19977125) } EVD { PRG|tblastxwrap_masked DB|na_baylorf1_scfchunk.dpse CLA|so DT|20041008 DBX|Contig6864_Contig4034-1 BLOC|complement(19975866..19976102) DBX|Contig2105_Contig7229-2 BLOC|complement(19975860..19976237) DBX|Contig2105_Contig7229-3 BLOC|complement(19975860..19976237) DBX|Contig2105_Contig7229-2 BLOC|complement(19976388..19976621) DBX|Contig2105_Contig7229-3 BLOC|complement(19976388..19976621) DBX|Contig6864_Contig4034-1 BLOC|complement(19976466..19976786) DBX|Contig2105_Contig7229-2 BLOC|complement(19976616..19977122) DBX|Contig2105_Contig7229-3 BLOC|complement(19976616..19977122) } EVD { PRG|blastx_masked DB|aa_SPTR.dmel CLA|protein DT|20041008 DBX|P81923 BLOC|complement(19975771..19975845,19976193..19977113) DBX|O46077 BLOC|complement(19975872..19976240,19976466..19977113) DBX|Q8IRZ5 BLOC|complement(19975872..19976270,19976388..19977125) DBX|Q9I816 BLOC|complement(19975872..19976270,19976388..19977125) } EVD { PRG|sim4 DB|na_transcript.dmel.RELEASE32 CLA|mRNA DT|20041008 DBX|CG18859-RB.32 BLOC|complement(19975756..19975821,19975875..19976235,19976389..19977125) } VERS|4.3 } # EOR GADR { RETE|ID 1 FBan0017003 GID 1 FBgn0031082 GSYM 1 CG17003 CGSYM 1 CG17003 ARM 1 X CLOC 1 19A4-19A4 SCAF 1 AE002611 TRREC 1 AALEN 1 287 ID|FBan0017003 SYM|CG17003 GENSR { GSYM|CG17003 ID|FBgn0031082 } ARM|X SCAF|AE002611 BLOC|complement(19834904..19836033) CLOCC|19A4-19A4 SQLEN|1130 ID2|FBan0017003 EST|bs19b09 |bs06a03 |AT23975 |AT21637 CDNA|AT21637 AFFY|145407_at DT|20031201 TRREC { NAM|CG17003-RA SYN|FlyBase:FBtr0070035 |FlyBase:FBpp0070034 |GB_protein:AAF45373.1 AANAM|CG17003-PA SQLEN|1130 (-) AALEN|287 BLOC|complement(19834904..19836033) CDS|complement(19835043..19835903) DT|20020704 } EVD { PRG|sim4 DB|na_gadfly.dros.RELEASE2 CLA|mRNA DT|20041008 DBX|CT35311.2 BLOC|complement(19834921..19836019) } EVD { PRG|genie_masked DB|dummy CLA|genie_masked DT|20041008 BLOC|complement(19835040..19835903) } EVD { PRG|dmel_r3_to_dmel_r4_migration DB|dmel_r3_affy_oligos CLA|oligonucleotide DT|20050125 DBX|145407_at_885 BLOC|complement(19835123..19835147) DBX|145407_at_825 BLOC|complement(19835183..19835207) DBX|145407_at_806 BLOC|complement(19835202..19835226) DBX|145407_at_765 BLOC|complement(19835243..19835267) DBX|145407_at_736 BLOC|complement(19835272..19835296) DBX|145407_at_684 BLOC|complement(19835324..19835348) DBX|145407_at_661 BLOC|complement(19835347..19835371) DBX|145407_at_573 BLOC|complement(19835435..19835459) DBX|145407_at_552 BLOC|complement(19835456..19835480) DBX|145407_at_533 BLOC|complement(19835475..19835499) DBX|145407_at_510 BLOC|complement(19835498..19835522) DBX|145407_at_979 BLOC|complement(19835029..19835053) DBX|145407_at_941 BLOC|complement(19835067..19835091) DBX|145407_at_922 BLOC|complement(19835086..19835110) } EVD { PRG|tblastx_masked DB|na_dbEST.insect CLA|EST DBX|BM596007 BLOC|complement(19835325..19835828) DBX|BX628206 BLOC|complement(19835325..19835909) } EVD { PRG|tblastxwrap_masked DB|na_scf_chunk_agambiae.fa CLA|DNA DT|20041008 DBX|AAAB01008960.1p82 BLOC|complement(19835379..19835540) } EVD { PRG|prosplign DB|aa_ncbi_other CLA|protein DT|20060124 DBX|NP_001026892 BLOC|complement(19835052..19835129,19835133..19835189,19835280..19835762) } EVD { PRG|sim4 DB|na_transcript.dmel.RELEASE32 CLA|mRNA DT|20041008 DBX|CG17003-RA.32 BLOC|complement(19834904..19836033) } EVD { PRG|sim4 DB|na_transcript.dmel.RELEASE31 CLA|mRNA DT|20041008 DBX|CG17003-RA.31 BLOC|complement(19834904..19836033) } EVD { PRG|genscan_masked DB|dummy CLA|genscan_masked DT|20041008 BLOC|complement(19829224..19829372,19835129..19835903) } EVD { PRG|sim4tandem DB|na_gb.dmel CLA|cDNA DT|20050823 DBX|AT21637 BLOC|complement(19834904..19836033) } EVD { PRG|blastx_masked DB|aa_SPTR.insect CLA|protein DT|20041008 DBX|Q7PNM6 BLOC|complement(19835325..19835918) } EVD { PRG|blastx_masked DB|aa_SPTR.rodent CLA|protein DT|20041008 DBX|Q8K2M7 BLOC|complement(19835325..19835900) DBX|Q8C1D1 BLOC|complement(19835325..19835900) DBX|Q8K341 BLOC|complement(19835325..19835900) } EVD { PRG|augustus DB|dummy CLA|augustus DT|20050713 BLOC|complement(19832556..19832731,19835129..19835903) } EVD { PRG|blastx_masked DB|aa_SPTR.othvert CLA|protein DT|20041008 DBX|AAH65981 BLOC|complement(19835325..19835900) DBX|BAD08442 BLOC|complement(19835325..19835900) DBX|BAD08430 BLOC|complement(19835325..19835900) } EVD { PRG|tblastxwrap_masked DB|na_baylorf1_scfchunk.dpse CLA|so DT|20041008 DBX|Contig1854_Contig7122-2 BLOC|complement(19835319..19835621) DBX|Contig7446_Contig2444-8 BLOC|complement(19835325..19835684) } EVD { PRG|blastx_masked DB|aa_SPTR.dmel CLA|protein DT|20041008 DBX|Q8T8W1 BLOC|complement(19835043..19835903) DBX|Q9W5X9 BLOC|complement(19835043..19835903) DBX|Q9VSY5 BLOC|complement(19835319..19835903) DBX|Q9VSY4 BLOC|complement(19835319..19835903) } EVD { PRG|sim4 DB|na_dbEST.diff.dmel CLA|EST DBX|bs19b09.y1 BLOC|complement(19834908..19835187) DBX|bs06a03.y1 BLOC|complement(19835607..19836018) DBX|AT23975.5prime BLOC|complement(19835768..19836026) DBX|AT21637:contig1 BLOC|complement(19835451..19836033) DBX|AT21637:contig2 BLOC|complement(19834905..19835399) } EVD { PRG|blastx_masked DB|aa_SPTR.worm CLA|protein DT|20041008 DBX|O45100 BLOC|complement(19835325..19835753) DBX|Q23192 BLOC|complement(19835325..19835759) } EVD { PRG|blastx_masked DB|aa_SPTR.primate CLA|protein DT|20041008 DBX|Q8NDK9 BLOC|complement(19835325..19835894) DBX|Q9H8X5 BLOC|complement(19835325..19835900) DBX|Q9BRS1 BLOC|complement(19835325..19835900) } VERS|4.3 } # EOR GADR { RETE|ID 1 FBan0032824 GID 1 FBgn0052824 GSYM 1 CG32824 CGSYM 1 CG32824 ARM 1 X CLOC 1 19B3-19B3 SCAF 1 AE002611 TRREC 1 AALEN 1 143 ID|FBan0032824 SYM|CG32824 GENSR { GSYM|CG32824 ID|FBgn0052824 } ARM|X SCAF|AE002611 BLOC|complement(19973774..19975256) CLOCC|19B3-19B3 SQLEN|1483 ID2|FBan0032824 |FBgn0042176 SYN|CG18859 DT|20031201 TRREC { NAM|CG32824-RA SYN|FlyBase:FBtr0070030 |FlyBase:FBpp0070029 |GB_protein:AAN08992.1 AANAM|CG32824-PA SQLEN|439 (-) AALEN|143 BLOC|complement(19973774..19973978,19974135..19974287,19975176..19975256) CDS|complement(19973777..19973978,19974135..19974287,19975176..19975249) DT|20020704 } EVD { PRG|genscan_masked DB|dummy CLA|genscan_masked DT|20041008 BLOC|complement(19973774..19973978,19974135..19974287,19975150..19975256, |19975875..19976235,19976389..19977125) } EVD { PRG|sim4 DB|na_gadfly.dros.RELEASE2 CLA|mRNA DT|20041008 DBX|CT42744.2 BLOC|complement(19973774..19973978,19974135..19974287,19975150..19975256, |19975875..19976235,19976389..19977125) } EVD { PRG|repeatmasker DB|dummy CLA|RepeatMasker:dummy DT|20041008 DBX|AC005453 BLOC|complement(19974324..19974595) } EVD { PRG|sim4 DB|na_transcript.dmel.RELEASE32 CLA|mRNA DT|20041008 DBX|CG32824-RA.32 BLOC|complement(19973774..19973978,19974135..19974287,19975176..19975256) } VERS|4.3 } # EOR GADR { RETE|ID 1 FBan0009565 GID 1 FBgn0031081 GSYM 1 Nep3 CGSYM 1 CG9565 ARM 1 X CLOC 1 19A3-19A3 SCAF 1 AE002611 TRREC 1 AALEN 1 786 ID|FBan0009565 SYM|CG9565 GENSR { GSYM|Nep3 ID|FBgn0031081 } ARM|X SCAF|AE002611 BLOC|19795626..19802432 CLOCC|19A3-19A3 SQLEN|6807 GO|zinc ion binding ; GO:0008270 |metalloendopeptidase activity ; GO:0004222 |endothelin-converting enzyme activity ; GO:0016511 |neprilysin activity ; GO:0004245 ID2|FBan0009565 SYN|dNEP3 |CEC EST|RE48040 |EK279245 |EK255055 |EK244006 |EK048824 |EK172616 CDNA|RE48040 AFFY|145406_at DT|20031201 TRREC { NAM|Nep3-RA SYN|FlyBase:FBtr0070000 |FlyBase Annotation IDs:CG9565-RA |FlyBase:FBpp0070000 |GB_protein:AAF45370.2 |FlyBase Annotation IDs:CG9565-PA |FlyBase:FBgn0081865 |FlyBase Annotation IDs:GA21880 |Dpse\GA21880 AANAM|Nep3-PA SQLEN|3553 AALEN|786 BLOC|join(19795626..19795782,19797892..19798008,19798719..19798881, |19798943..19799063,19799134..19799448,19799514..19800008,19800120..19800949, |19801018..19801160,19801221..19802432) CDS|join(19797892..19798008,19798719..19798881,19798943..19799063, |19799134..19799448,19799514..19800008,19800120..19800949,19801018..19801160, |19801221..19801394) CMT|comment=Range of putative ortholog from tblastn was extended |to cover the gene prediction DT|20020704 } EVD { PRG|blastx_masked DB|aa_SPTR.othinv CLA|protein DT|20041008 DBX|Q7Q3B4 BLOC|join(19797892..19798008,19798939..19799061,19799117..19799440, |19799512..19800009,19800124..19800978,19801014..19801163,19801200..19801394) DBX|Q9U9P2 BLOC|join(19798969..19799061,19799141..19799443,19799545..19799886, |19800058..19800954,19801014..19801163,19801200..19801394) DBX|Q7Q1H1 BLOC|join(19798987..19799061,19799141..19799431,19799545..19799976, |19800058..19800978,19801017..19801163,19801200..19801394) } EVD { PRG|bdgp_unknown_clonelocator DB|scaffoldBACs CLA|BAC DT|20041221 DBX|BACR39I01 BLOC|19729764..19890910 } EVD { PRG|sim4 DB|na_gadfly.dros.RELEASE2 CLA|mRNA DT|20041008 DBX|CT17304.2 BLOC|join(19798782..19798881,19798943..19799063,19799134..19799448, |19799514..19800008,19800120..19800949,19801018..19801160,19801221..19801397) } EVD { PRG|genie_masked DB|dummy CLA|genie_masked DT|20041008 BLOC|join(19798782..19798881,19798943..19799063,19799134..19799448, |19799514..19800008,19800120..19800949,19801018..19801160,19801221..19801397) } EVD { PRG|dmel_r3_to_dmel_r4_migration DB|dmel_r3_affy_oligos CLA|oligonucleotide DT|20050125 DBX|145406_at_1555 BLOC|19800631..19800655 DBX|145406_at_1599 BLOC|19800675..19800699 DBX|145406_at_1626 BLOC|19800702..19800726 DBX|145406_at_1655 BLOC|19800731..19800755 DBX|145406_at_1658 BLOC|19800734..19800758 DBX|145406_at_1702 BLOC|19800778..19800802 DBX|145406_at_1707 BLOC|19800783..19800807 DBX|145406_at_1739 BLOC|19800815..19800839 DBX|145406_at_1843 BLOC|19800919..19800943 DBX|145406_at_1888 BLOC|19801032..19801056 DBX|145406_at_1892 BLOC|19801036..19801060 DBX|145406_at_1986 BLOC|19801130..19801154 DBX|145406_at_2022 BLOC|19801226..19801250 DBX|145406_at_2048 BLOC|19801252..19801276 } EVD { PRG|tblastx_masked DB|na_dbEST.insect CLA|EST DBX|BM631864 BLOC|19800247..19800939 DBX|BI516460 BLOC|19800454..19800954 DBX|BI505516 BLOC|join(19800517..19800978,19801017..19801163) } EVD { PRG|tblastxwrap_masked DB|na_scf_chunk_agambiae.fa CLA|DNA DT|20041008 DBX|AAAB01008964.1p114 BLOC|19797889..19798008 DBX|AAAB01008964.1p114 BLOC|19798960..19799061 DBX|AAAB01008964.1p114 BLOC|19799135..19799386 DBX|AAAB01008879.1p10 BLOC|19799647..19799877 DBX|AAAB01008964.1p114 BLOC|19799653..19800009 DBX|AAAB01008987.1p58 BLOC|19799656..19799976 DBX|AAAB01008879.1p10 BLOC|19800043..19800915 DBX|AAAB01008980.1p72 BLOC|19800058..19800531 DBX|AAAB01008859.1p102 BLOC|19800079..19800534 DBX|AAAB01008987.1p58 BLOC|19800079..19800558 DBX|AAAB01008964.1p114 BLOC|19800115..19800954 DBX|AAAB01001730 BLOC|19800271..19800507 DBX|AAAB01001730 BLOC|19800544..19800912 DBX|AAAB01008980.1p72 BLOC|19800667..19800918 DBX|AAAB01008987.1p58 BLOC|19800685..19800933 DBX|AAAB01008879.1p10 BLOC|19801188..19801394 DBX|AAAB01008964.1p114 BLOC|19801200..19801394 DBX|AAAB01008987.1p58 BLOC|19801200..19801394 DBX|AAAB01008980.1p72 BLOC|19801200..19801394 } EVD { PRG|sim4 DB|na_dbEST.same.dmel CLA|EST DBX|RE48040:contig2 BLOC|19801760..19802415 DBX|RE48040:contig1 BLOC|join(19795626..19795782,19797892..19798008,19798719..19798881, |19798943..19799063,19799134..19799236) } EVD { PRG|prosplign DB|aa_ncbi_other CLA|protein DT|20060124 DBX|NP_001032401 BLOC|join(19798668..19798853,19798963..19799063,19799134..19799448, |19799514..19800008,19800120..19800949,19801018..19801160,19801221..19801394) } EVD { PRG|sim4 DB|na_transcript.dmel.RELEASE32 CLA|mRNA DT|20041008 DBX|CG9565-RA.32 BLOC|join(19795626..19795782,19797892..19798008,19798719..19798881, |19798943..19799063,19799134..19799448,19799514..19800008,19800120..19800949, |19801018..19801160,19801221..19802432) } EVD { PRG|sim4 DB|na_transcript.dmel.RELEASE31 CLA|mRNA DT|20041008 DBX|CG9565-RA.31 BLOC|join(19795626..19795782,19797892..19798008,19798719..19798881, |19798943..19799063,19799134..19799448,19799514..19800008,19800120..19800949, |19801018..19801160,19801221..19802432) } EVD { PRG|sim4tandem DB|na_gb.dmel CLA|cDNA DT|20050823 DBX|RE48040 BLOC|join(19795626..19795782,19797892..19798008,19798719..19798881, |19798943..19799063,19799134..19799448,19799514..19800008,19800120..19800949, |19801018..19801160,19801221..19802432) } EVD { PRG|genscan_masked DB|dummy CLA|genscan_masked DT|20041008 BLOC|join(19797255..19797278,19797892..19798008,19798719..19798881, |19798943..19799063,19799134..19799448,19799514..19800008,19800120..19800949, |19801018..19801160,19801221..19801393,19804649..19804739,19809562..19809706, |19814894..19815099,19815415..19815504,19826211..19826409,19828001..19828137) } EVD { PRG|blastx_masked DB|aa_SPTR.insect CLA|protein DT|20041008 DBX|Q86RS4 BLOC|join(19798954..19799061,19799129..19799383,19799515..19799892, |19800055..19800978,19801197..19801394) DBX|Q8IS64 BLOC|join(19798960..19799061,19799141..19799449,19799512..19800009, |19800064..19800978,19801014..19801163,19801200..19801394) DBX|Q7PQR4 BLOC|join(19798993..19799073,19799129..19799236,19799192..19799383, |19799506..19799880,19800049..19800978,19801017..19801394) } EVD { PRG|blastx_masked DB|aa_SPTR.rodent CLA|protein DT|20041008 DBX|Q9ERK2 BLOC|join(19798930..19799061,19799141..19799449,19799512..19800978, |19801014..19801163,19801200..19801394) DBX|Q80Z60 BLOC|join(19798969..19799061,19799126..19799386,19799515..19799988, |19800058..19800978,19801005..19801163,19801200..19801394) DBX|Q8K0P0 BLOC|join(19799563..19799988,19800064..19800978,19801005..19801163) } EVD { PRG|augustus DB|dummy CLA|augustus DT|20050713 BLOC|join(19797892..19798008,19798719..19798881,19798943..19799063, |19799134..19799448,19799514..19800008,19800120..19800949,19801018..19801160, |19801221..19801397) } EVD { PRG|tblastxwrap_masked DB|na_baylorf1_scfchunk.dpse CLA|so DT|20041008 DBX|Contig3681_Contig434-14 BLOC|19800268..19800627 DBX|Contig1006_Contig943-6 BLOC|19800631..19800954 DBX|Contig2803_Contig3631-2 BLOC|19800646..19800909 DBX|Contig1882_Contig2908-1 BLOC|19800682..19800918 DBX|Contig3681_Contig434-14 BLOC|19800685..19800909 DBX|Contig7891_Contig7492A.fa-9 BLOC|19800730..19800921 DBX|Contig2803_Contig3631-1 BLOC|19800733..19800915 DBX|Contig2105_Contig7229-2 BLOC|19801017..19801163 DBX|Contig7891_Contig7492A.fa-9 BLOC|19801200..19801394 DBX|Contig1006_Contig943-6 BLOC|19801200..19801394 DBX|Contig837_Contig5345-1 BLOC|19801200..19801394 DBX|Contig1882_Contig2908-1 BLOC|19801200..19801394 DBX|Contig2105_Contig7229-2 BLOC|19801221..19801394 DBX|Contig3681_Contig434-14 BLOC|19801278..19801394 DBX|Contig2105_Contig7229-2 BLOC|19797874..19798011 DBX|Contig2105_Contig7229-2 BLOC|19798710..19798835 DBX|Contig2105_Contig7229-2 BLOC|19798930..19799064 DBX|Contig2105_Contig7229-2 BLOC|19799132..19799449 DBX|Contig2105_Contig7229-2 BLOC|19799512..19800009 DBX|Contig1882_Contig2908-1 BLOC|19799668..19799892 DBX|Contig837_Contig5345-1 BLOC|19800058..19800918 DBX|Contig2105_Contig7229-2 BLOC|19800118..19800954 DBX|Contig1882_Contig2908-1 BLOC|19800124..19800528 } EVD { PRG|blastx_masked DB|aa_SPTR.othvert CLA|protein DT|20041008 DBX|AAO72360 BLOC|join(19798969..19799061,19799126..19799386,19799515..19799988, |19800064..19800978,19801014..19801163,19801200..19801394) DBX|Q10711 BLOC|join(19798969..19799061,19799126..19799386,19799515..19799988, |19800064..19800978,19801014..19801163,19801200..19801394) DBX|Q865C4 BLOC|join(19798969..19799061,19799126..19799386,19799515..19799988, |19800064..19800978,19801014..19801163,19801200..19801394) } EVD { PRG|sim4 DB|na_dbEST.diff.dmel CLA|EST DBX|EK279245.5prime BLOC|join(19797113..19797278,19797892..19798008,19798719..19798881, |19798943..19799010) DBX|EK255055.5prime BLOC|join(19799135..19799448,19799514..19799648) DBX|EK244006.5prime BLOC|join(19801780..19801856,19801871..19802237) DBX|EK048824.5prime BLOC|19801989..19802489 DBX|EK172616.5prime BLOC|19802011..19802616 } EVD { PRG|blastx_masked DB|aa_SPTR.dmel CLA|protein DT|20041008 DBX|Q9VB85 BLOC|join(19798975..19799061,19799138..19799371,19800070..19800723) DBX|Q8IMQ2 BLOC|join(19798975..19799061,19799138..19799371,19800070..19800978, |19801005..19801163,19801200..19801394) DBX|Q9VAS4 BLOC|join(19798987..19799073,19799222..19799374,19799506..19799871, |19800361..19800906,19801020..19801160) DBX|Q9Y136 BLOC|19798996..19799115 DBX|Q9VCU3 BLOC|join(19798996..19799061,19799201..19799422,19800250..19800918) DBX|Q9VAS1 BLOC|join(19798996..19799073,19799126..19799371,19800511..19800930) DBX|Q9VH96 BLOC|join(19798999..19799073,19799162..19799377,19800253..19800954, |19801008..19801394) DBX|Q9VK72 BLOC|join(19799005..19799061,19799126..19799335,19800256..19800975, |19801017..19801160,19801200..19801394) DBX|Q8T062 BLOC|join(19799017..19799073,19799129..19799287,19799186..19799446, |19799506..19799868,19800040..19800978,19801017..19801163,19801200..19801394) DBX|Q9I7I4 BLOC|join(19799017..19799073,19799129..19799287,19799186..19799446, |19799506..19799868,19800040..19800978,19801017..19801163,19801200..19801394) DBX|Q8MRG3 BLOC|join(19799029..19799073,19799129..19799302,19800238..19800978) DBX|Q9VAS2 BLOC|join(19799029..19799073,19799129..19799302,19800238..19800978) DBX|Q9W436 BLOC|join(19799045..19799401,19799545..19799892,19800124..19800978, |19801017..19801163,19801200..19801394) DBX|Q8SWS1 BLOC|join(19799081..19799449,19799512..19800009,19799938..19800978, |19801014..19801163,19801200..19801394) DBX|Q9W5Y0 BLOC|join(19799081..19799449,19799512..19800009,19799938..19800978, |19801014..19801163,19801200..19801394) DBX|Q9Y136 BLOC|join(19799117..19799371,19799512..19799769,19800226..19800978, |19801008..19801385) DBX|Q9VAS0 BLOC|join(19799117..19799371,19799512..19799874,19800256..19800978, |19801008..19801385) DBX|Q95U74 BLOC|join(19800241..19800948,19801011..19801163) DBX|Q9VCU1 BLOC|join(19800241..19800948,19801011..19801163) DBX|Q9VAY0 BLOC|join(19800301..19800978,19801020..19801394) DBX|Q8T0H9 BLOC|19800511..19800930 DBX|Q9VYJ1 BLOC|19800550..19800954 DBX|Q961U6 BLOC|19800550..19800954 DBX|Q95SM2 BLOC|join(19800733..19800978,19801005..19801163,19801200..19801394) DBX|Q9W5Y0 BLOC|join(19797892..19798008,19798713..19798880,19798942..19799073) DBX|Q8SWS1 BLOC|join(19797892..19798008,19798713..19798880,19798942..19799073) DBX|Q9VCU3 BLOC|19798366..19798578 DBX|Q9XZ01 BLOC|join(19798710..19798802,19798969..19799061,19799141..19799434, |19799515..19799982,19800088..19800978,19801017..19801160,19801197..19801394) DBX|Q8IHC6 BLOC|join(19798969..19799061,19799138..19799371,19800070..19800723) } EVD { PRG|blastx_masked DB|aa_SPTR.worm CLA|protein DT|20041008 DBX|Q8ITZ3 BLOC|join(19798725..19798826,19798927..19799061,19799138..19799401, |19799515..19800003,19800070..19800978) DBX|O16796 BLOC|join(19798725..19798826,19798927..19799061,19799138..19799401, |19799515..19800003,19800070..19800978,19801017..19801157,19801200..19801394) DBX|Q18673 BLOC|join(19799069..19799377,19799533..19799868,19800070..19800978, |19801182..19801394) } EVD { PRG|blastx_masked DB|aa_SPTR.primate CLA|protein DT|20041008 DBX|AAQ89362 BLOC|join(19798969..19799061,19799126..19799386,19799515..19799988, |19800058..19800978,19801014..19801163,19801200..19801394) DBX|Q8NFD7 BLOC|join(19798969..19799061,19799126..19799386,19799515..19799988, |19800058..19800978,19801014..19801163,19801200..19801394) DBX|O60344 BLOC|join(19798969..19799061,19799126..19799386,19799515..19799988, |19800058..19800978,19801014..19801163,19801200..19801394) } VERS|4.3 } # EOR GADR { RETE|ID 1 FBan0015322 GID 1 FBgn0031088 GSYM 1 CG15322 CGSYM 1 CG15322 ARM 1 X CLOC 1 19B3-19B3 SCAF 1 AE002611 TRREC 1 AALEN 1 738 ID|FBan0015322 SYM|CG15322 GENSR { GSYM|CG15322 ID|FBgn0031088 } ARM|X SCAF|AE002611 BLOC|19968933..19972309 CLOCC|19B3-19B3 SQLEN|3377 ID2|FBan0015322 AFFY|151193_f_at |145413_at DT|20031201 TRREC { NAM|CG15322-RA SYN|FlyBase:FBtr0070005 |FlyBase:FBpp0070004 |GB_protein:AAF45377.1 |FlyBase:FBgn0073682 |FlyBase Annotation IDs:GA13646 |Dpse\GA13646 AANAM|CG15322-PA SQLEN|2217 AALEN|738 BLOC|join(19968933..19969170,19969784..19969941,19970046..19970958, |19971402..19972309) CDS|join(19968933..19969170,19969784..19969941,19970046..19970958, |19971402..19972306) CMT|comment=Range of putative ortholog from tblastn was extended |to cover the gene prediction DT|20020704 } EVD { PRG|bdgp_unknown_clonelocator DB|scaffoldBACs CLA|BAC DT|20041221 DBX|BACR11H15 BLOC|19831670..20009622 } EVD { PRG|sim4 DB|na_transcript.dmel.RELEASE31 CLA|mRNA DT|20041008 DBX|CG15322-RA.31 BLOC|join(19968933..19969170,19969784..19969941,19970046..19970958, |19971402..19972309) } EVD { PRG|genscan_masked DB|dummy CLA|genscan_masked DT|20041008 BLOC|join(19967927..19967950,19968951..19969170,19969784..19969941, |19970046..19970656,19970844..19970958,19971692..19971986,19972311..19972693) } EVD { PRG|sim4 DB|na_gadfly.dros.RELEASE2 CLA|mRNA DT|20041008 DBX|CT35313.2 BLOC|join(19968933..19969170,19969784..19969941,19970046..19970958, |19971402..19972309) } EVD { PRG|repeat_runner_seg DB|dummy CLA|repeat_runner_seg DT|20041008 BLOC|19970688..19970767 BLOC|19971402..19971664 BLOC|19972141..19972217 } EVD { PRG|augustus DB|dummy CLA|augustus DT|20050713 BLOC|join(19968933..19969170,19969784..19969941,19970046..19970958, |19971510..19972309) } EVD { PRG|repeatmasker DB|dummy CLA|RepeatMasker:dummy DT|20041008 DBX|AY180917 BLOC|19970698..19970757 DBX|AY219709 BLOC|19971482..19971654 DBX|AY180917 BLOC|19972151..19972207 } EVD { PRG|genie_masked DB|dummy CLA|genie_masked DT|20041008 BLOC|join(19968933..19969170,19969784..19969941,19970046..19970958, |19971402..19972309) } EVD { PRG|tblastxwrap_masked DB|na_baylorf1_scfchunk.dpse CLA|so DT|20041008 DBX|Contig2105_Contig7229-3 BLOC|19970514..19970642 DBX|Contig2105_Contig7229-2 BLOC|19970514..19970642 DBX|Contig2105_Contig7229-3 BLOC|19971659..19971793 DBX|Contig2105_Contig7229-2 BLOC|19971659..19971793 DBX|Contig2105_Contig7229-3 BLOC|19972049..19972264 DBX|Contig2105_Contig7229-2 BLOC|19972049..19972264 } EVD { PRG|blastx_masked DB|aa_SPTR.dmel CLA|protein DT|20041008 DBX|Q9W5X2 BLOC|join(19969783..19969905,19970013..19970687,19970922..19970966, |19971659..19972306) } EVD { PRG|dmel_r3_to_dmel_r4_migration DB|dmel_r3_affy_oligos CLA|oligonucleotide DT|20050125 DBX|151193_f_at_78 BLOC|19970732..19970756 DBX|145413_at_1942 BLOC|19972022..19972046 DBX|145413_at_1667 BLOC|19971747..19971771 DBX|145413_at_1945 BLOC|19972025..19972049 DBX|145413_at_1690 BLOC|19971770..19971794 DBX|145413_at_2011 BLOC|19972091..19972115 DBX|145413_at_1701 BLOC|19971781..19971805 DBX|145413_at_2064 BLOC|19972144..19972168 DBX|145413_at_1743 BLOC|19971823..19971847 DBX|145413_at_2150 BLOC|19972230..19972254 DBX|145413_at_1764 BLOC|19971844..19971868 DBX|145413_at_1787 BLOC|19971867..19971891 DBX|145413_at_1828 BLOC|19971908..19971932 DBX|145413_at_1853 BLOC|19971933..19971957 DBX|145413_at_1903 BLOC|19971983..19972007 } EVD { PRG|sim4 DB|na_transcript.dmel.RELEASE32 CLA|mRNA DT|20041008 DBX|CG15322-RA.32 BLOC|join(19968933..19969170,19969784..19969941,19970046..19970958, |19971402..19972309) } VERS|4.3 } # EOR GADR { RETE|ID 1 FBan0012655 GID 1 FBgn0031080 GSYM 1 CG12655 CGSYM 1 CG12655 ARM 1 X CLOC 1 19A3-19A3 SCAF 1 AE002611 TRREC 1 AALEN 1 141 ID|FBan0012655 SYM|CG12655 GENSR { GSYM|CG12655 ID|FBgn0031080 } ARM|X SCAF|AE002611 BLOC|complement(19792437..19792932) CLOCC|19A3-19A3 SQLEN|496 ID2|FBan0012655 EST|LP17509 CDNA|LP17509 |IP04220 |IP04120 |IP04020 AFFY|145405_at DT|20031201 TRREC { NAM|CG12655-RA SYN|FlyBase:FBtr0070036 |FlyBase:FBpp0070035 |GB_protein:AAF45381.2 |FlyBase:FBgn0071789 |FlyBase Annotation IDs:GA11740 |Dpse\GA11740 AANAM|CG12655-PA SQLEN|426 (-) AALEN|141 BLOC|complement(19792437..19792837,19792908..19792932) CDS|complement(19792440..19792837,19792908..19792932) DT|20020704 } EVD { PRG|sim4 DB|na_transcript.dmel.RELEASE31 CLA|mRNA DT|20041008 DBX|CG32511-RA.31 BLOC|complement(19792437..19792684) DBX|CG12655-RA.31 BLOC|complement(19792437..19792837,19792908..19792932) } EVD { PRG|genscan_masked DB|dummy CLA|genscan_masked DT|20041008 BLOC|complement(19790840..19790916,19791907..19792120,19792494..19792837, |19793238..19793304) } EVD { PRG|sim4tandem DB|na_gb.dmel CLA|cDNA DT|20050823 DBX|LP17509 BLOC|complement(19792326..19792837,19793238..19793325) } EVD { PRG|sim4 DB|na_gadfly.dros.RELEASE2 CLA|mRNA DT|20041008 DBX|CT35310.2 BLOC|complement(19792437..19792837,19792908..19792932) } EVD { PRG|prosplign DB|aa_ncbi_dmel CLA|protein DT|20060123 DBX|AAY55421 BLOC|complement(19792440..19792837,19793238..19793316) DBX|AAY55460 BLOC|complement(19792440..19792837,19793238..19793310) DBX|AAS77436 BLOC|complement(19792440..19792837,19793238..19793325) DBX|AAY55384 BLOC|complement(19792440..19792837,19793238..19793310) } EVD { PRG|genie_masked DB|dummy CLA|genie_masked DT|20041008 BLOC|complement(19792437..19792837,19792908..19792932) } EVD { PRG|augustus DB|dummy CLA|augustus DT|20050713 BLOC|complement(19792437..19792837,19793238..19793304) } EVD { PRG|tblastxwrap_masked DB|na_baylorf1_scfchunk.dpse CLA|so DT|20041008 DBX|Contig2105_Contig7229-2 BLOC|complement(19792485..19792811) DBX|Contig2105_Contig7229-1 BLOC|complement(19792485..19792811) } EVD { PRG|blastx_masked DB|aa_SPTR.dmel CLA|protein DT|20041008 DBX|Q8IRZ6 BLOC|complement(19792443..19792643) DBX|Q8IQ37 BLOC|complement(19792515..19792643) DBX|Q9W5Y1 BLOC|complement(19792443..19792838) } EVD { PRG|dmel_r3_to_dmel_r4_migration DB|dmel_r3_affy_oligos CLA|oligonucleotide DT|20050125 DBX|145405_at_85 BLOC|complement(19792836..19792860) DBX|145405_at_39 BLOC|complement(19792882..19792906) DBX|145405_at_284 BLOC|complement(19792637..19792661) DBX|145405_at_255 BLOC|complement(19792666..19792690) DBX|145405_at_194 BLOC|complement(19792727..19792751) DBX|145405_at_168 BLOC|complement(19792753..19792777) DBX|145405_at_147 BLOC|complement(19792774..19792798) DBX|145405_at_126 BLOC|complement(19792795..19792819) DBX|145405_at_99 BLOC|complement(19792822..19792846) } EVD { PRG|splign DB|na_cDNA_ncbi CLA|cDNA DT|20050907 DBX|IP04220 BLOC|complement(19792331..19792837,19793238..19793310) DBX|IP04120 BLOC|complement(19792331..19792837,19793238..19793318) DBX|IP04020 BLOC|complement(19792329..19792837,19793238..19793310) } EVD { PRG|sim4 DB|na_dbEST.same.dmel CLA|EST DBX|LP17509.5prime BLOC|complement(19792333..19792837,19793238..19793325) } EVD { PRG|sim4 DB|na_transcript.dmel.RELEASE32 CLA|mRNA DT|20041008 DBX|CG32511-RA.32 BLOC|complement(19792437..19792684) DBX|CG12655-RA.32 BLOC|complement(19792437..19792837,19792908..19792932) } VERS|4.3 } # EOR GADR { RETE|ID 1 FBan0012656 GID 1 FBgn0031087 GSYM 1 CG12656 CGSYM 1 CG12656 ARM 1 X CLOC 1 19B1-19B1 SCAF 1 AE002611 TRREC 1 AALEN 1 137 ID|FBan0012656 SYM|CG12656 GENSR { GSYM|CG12656 ID|FBgn0031087 } ARM|X SCAF|AE002611 BLOC|19956392..19957010 CLOCC|19B1-19B1 SQLEN|619 ID2|FBan0012656 |FBgn0062935 |FBgn0047107 SYN|BcDNA:RH47776 |BcDNA:RE41492 EST|RE41492 |EK207246 |RH47776 |RH61786 CDNA|RH47776 |RE41492 AFFY|145412_at DT|20031201 TRREC { NAM|CG12656-RA SYN|FlyBase:FBtr0070004 |FlyBase:FBpp0070003 |GB_protein:AAF45382.2 |FlyBase:FBgn0071790 |FlyBase Annotation IDs:GA11741 |Dpse\GA11741 AANAM|CG12656-PA SQLEN|619 AALEN|137 BLOC|19956392..19957010 CDS|19956512..19956922 DT|20020704 } EVD { PRG|sim4 DB|na_transcript.dmel.RELEASE31 CLA|mRNA DT|20041008 DBX|CG12656-RA.31 BLOC|19956392..19957010 } EVD { PRG|bdgp_unknown_clonelocator DB|scaffoldBACs CLA|BAC DT|20041221 DBX|BACR11H15 BLOC|19831670..20009622 } EVD { PRG|genscan_masked DB|dummy CLA|genscan_masked DT|20041008 BLOC|join(19956421..19956612,19958833..19958983,19960352..19960464) } EVD { PRG|sim4tandem DB|na_gb.dmel CLA|cDNA DT|20050823 DBX|RH47776 BLOC|19956392..19956999 DBX|RE41492 BLOC|19956394..19957000 } EVD { PRG|sim4 DB|na_gadfly.dros.RELEASE2 CLA|mRNA DT|20041008 DBX|CT35312.2 BLOC|19956343..19956756 } EVD { PRG|genie_masked DB|dummy CLA|genie_masked DT|20041008 BLOC|19956343..19956756 } EVD { PRG|augustus DB|dummy CLA|augustus DT|20050713 BLOC|19956343..19956756 } EVD { PRG|tblastxwrap_masked DB|na_baylorf1_scfchunk.dpse CLA|so DT|20041008 DBX|Contig2105_Contig7229-2 BLOC|19956541..19956753 DBX|Contig2105_Contig7229-3 BLOC|19956541..19956753 } EVD { PRG|blastx_masked DB|aa_SPTR.dmel CLA|protein DT|20041008 DBX|Q8MYU7 BLOC|19956396..19956737 DBX|Q9W5X3 BLOC|19956512..19956922 } EVD { PRG|sim4 DB|na_dbEST.diff.dmel CLA|EST DBX|EK207246.5prime BLOC|join(19957005..19957042,19957063..19957291) } EVD { PRG|dmel_r3_to_dmel_r4_migration DB|dmel_r3_affy_oligos CLA|oligonucleotide DT|20050125 DBX|145412_at_251 BLOC|19956581..19956605 DBX|145412_at_46 BLOC|19956376..19956400 DBX|145412_at_259 BLOC|19956589..19956613 DBX|145412_at_82 BLOC|19956412..19956436 DBX|145412_at_270 BLOC|19956600..19956624 DBX|145412_at_121 BLOC|19956451..19956475 DBX|145412_at_350 BLOC|19956680..19956704 DBX|145412_at_146 BLOC|19956476..19956500 DBX|145412_at_162 BLOC|19956492..19956516 DBX|145412_at_174 BLOC|19956504..19956528 DBX|145412_at_199 BLOC|19956529..19956553 DBX|145412_at_213 BLOC|19956543..19956567 DBX|145412_at_238 BLOC|19956568..19956592 } EVD { PRG|sim4 DB|na_dbEST.same.dmel CLA|EST DBX|RE41492.5prime BLOC|19956394..19956918 DBX|RH47776.5prime BLOC|19956392..19956999 DBX|RH61786.5prime BLOC|19956392..19957000 } EVD { PRG|sim4 DB|na_transcript.dmel.RELEASE32 CLA|mRNA DT|20041008 DBX|CG12656-RA.32 BLOC|19956392..19957010 } VERS|4.3 } # EOR GADR { RETE|ID 1 FBan0032821 GID 1 FBgn0052821 GSYM 1 CG32821 CGSYM 1 CG32821 ARM 1 X CLOC 1 19A2-19A2 SCAF 1 AE002611 TRREC 1 AALEN 1 109 ID|FBan0032821 SYM|CG32821 GENSR { GSYM|CG32821 ID|FBgn0052821 } ARM|X SCAF|AE002611 BLOC|complement(19744213..19744640) CLOCC|19A2-19A2 SQLEN|428 GO|biological process unknown ; GO:0000004 |molecular function unknown ; GO:0005554 |cellular component unknown ; GO:0008372 ID2|FBan0032821 AFFY|145405_at DT|20031201 TRREC { NAM|CG32821-RA SYN|FlyBase:FBtr0070037 |FlyBase:FBpp0070036 |GB_protein:AAN08990.1 |FlyBase:FBgn0077179 |FlyBase Annotation IDs:GA17165 |Dpse\GA17165 AANAM|CG32821-PA SQLEN|330 (-) AALEN|109 BLOC|complement(19744213..19744430,19744529..19744640) CDS|complement(19744216..19744430,19744529..19744640) DT|20020704 } EVD { PRG|sim4 DB|na_transcript.dmel.RELEASE31 CLA|mRNA DT|20041008 DBX|CG32821-RA.31 BLOC|complement(19744213..19744430,19744529..19744640) } EVD { PRG|genscan_masked DB|dummy CLA|genscan_masked DT|20041008 BLOC|complement(19742604..19742680,19743673..19743886,19744270..19744471, |19747778..19747844,19748837..19749050,19749434..19749635,19752942..19753008, |19754000..19754213,19754588..19754671) } EVD { PRG|prosplign DB|aa_ncbi_dmel CLA|protein DT|20060123 DBX|AAS77436 BLOC|complement(19744216..19744458) DBX|AAY55384 BLOC|complement(19744216..19744458) DBX|AAY55421 BLOC|complement(19744216..19744458) DBX|AAY55460 BLOC|complement(19744216..19744458) } EVD { PRG|augustus DB|dummy CLA|augustus DT|20050713 BLOC|complement(19744213..19744471,19748709..19748740,19749000..19749092) } EVD { PRG|genie_masked DB|dummy CLA|genie_masked DT|20041008 BLOC|complement(19744213..19744430,19746704..19746740) } EVD { PRG|repeatmasker DB|dummy CLA|RepeatMasker:dummy DT|20041008 DBX|M22874 BLOC|complement(19744508..19744741) } EVD { PRG|tblastxwrap_masked DB|na_baylorf1_scfchunk.dpse CLA|so DT|20041008 DBX|Contig2105_Contig7229-1 BLOC|complement(19744360..19744458) DBX|Contig2105_Contig7229-2 BLOC|complement(19744360..19744458) } EVD { PRG|blastx_masked DB|aa_SPTR.dmel CLA|protein DT|20041008 DBX|Q8IRZ6 BLOC|complement(19744219..19744431) DBX|Q9W5Y1 BLOC|complement(19744219..19744455) DBX|Q8IQ37 BLOC|complement(19744291..19744455) } EVD { PRG|dmel_r3_to_dmel_r4_migration DB|dmel_r3_affy_oligos CLA|oligonucleotide DT|20050125 DBX|145405_at_339 BLOC|complement(19744346..19744370) DBX|145405_at_330 BLOC|complement(19744355..19744379) DBX|145405_at_309 BLOC|complement(19744376..19744400) } EVD { PRG|sim4 DB|na_transcript.dmel.RELEASE32 CLA|mRNA DT|20041008 DBX|CG32821-RA.32 BLOC|complement(19744213..19744430,19744529..19744640) } VERS|4.3 } # EOR GADR { RETE|ID 1 FBan0033498 GID 1 FBgn0053498 GSYM 1 CG33498 CGSYM 1 CG33498 ARM 1 X CLOC 1 19C1-19C1 SCAF 1 AE002611 TRREC 1 AALEN 1 121 ID|FBan0033498 SYM|CG33498 GENSR { GSYM|CG33498 ID|FBgn0053498 } ARM|X SCAF|AE002611 BLOC|complement(20035860..20036702) CLOCC|19C1-19C1 SQLEN|843 GO|calcium-dependent phospholipid binding ; GO:0005544 CMT|comment=Gene remnant homologous to 3' end of AnnX; by-product |of duplication event. DT|20040816 TRREC { NAM|CG33498-RA SYN|FlyBase:FBtr0089611 |FlyBase:FBpp0089017 |GB_protein:AAS65424.2 |GB_protein:AAS65424.1 AANAM|CG33498-PA SQLEN|366 (-) AALEN|121 BLOC|complement(20035860..20035916,20036312..20036490,20036573..20036702) CDS|complement(20035863..20035916,20036312..20036490,20036573..20036702) DT|20040624 } EVD { PRG|blastx_masked DB|aa_SPTR.othinv CLA|protein DT|20041008 DBX|Q7QM49 BLOC|complement(20035863..20035913,20036312..20036488) DBX|Q7QM48 BLOC|complement(20035863..20035919,20036312..20036488) DBX|Q9U5S3 BLOC|complement(20036324..20036482,20036640..20036783) } EVD { PRG|genscan_masked DB|dummy CLA|genscan_masked DT|20041008 BLOC|complement(20008271..20008546,20008614..20009536,20009920..20010096, |20011952..20012079,20012592..20012776,20012886..20013067,20013154..20013361, |20016015..20016362,20016430..20017352,20017731..20017907,20019816..20019943, |20020456..20020640,20020750..20020931,20021026..20021233,20023796..20025069, |20025448..20025624,20027515..20027642,20028155..20028339,20028449..20028630, |20028713..20028920,20031574..20031921,20031989..20032911,20033290..20033466, |20035375..20035502,20036015..20036199,20036309..20036490,20036573..20036780) } EVD { PRG|blastx_masked DB|aa_SPTR.insect CLA|protein DT|20041008 DBX|Q9NL52 BLOC|complement(20036318..20036488,20036640..20036711) DBX|Q9NL54 BLOC|complement(20036318..20036488,20036640..20036711) DBX|Q7PDX4 BLOC|complement(20036318..20036485,20036640..20036711) } EVD { PRG|blastx_masked DB|aa_SPTR.rodent CLA|protein DT|20041008 DBX|Q99KH3 BLOC|complement(20035869..20035931,20036291..20036437) DBX|Q9CVK5 BLOC|complement(20036312..20036485,20036640..20036714) } EVD { PRG|augustus DB|dummy CLA|augustus DT|20050713 BLOC|complement(20031568..20031921,20031989..20032911,20033290..20033466, |20035375..20035456,20036309..20036490,20036573..20036818,20038775..20038805) } EVD { PRG|genie_masked DB|dummy CLA|genie_masked DT|20041008 BLOC|complement(20008271..20008546,20008614..20009536,20009920..20010096, |20011952..20012079,20012395..20012456,20012886..20013067,20013154..20013361, |20016015..20016362,20016430..20017352,20017731..20017907,20019816..20019897, |20020750..20020931,20021026..20021233,20023796..20025069,20025448..20025624, |20027515..20027642,20027958..20028019,20028449..20028630,20028713..20028920, |20031574..20031921,20031989..20032911,20033290..20033466,20035375..20035456, |20036309..20036490,20036573..20036702) } EVD { PRG|tblastxwrap_masked DB|na_baylorf1_scfchunk.dpse CLA|so DT|20041008 DBX|Contig2105_Contig7229-3 BLOC|complement(20036303..20036491) DBX|Contig1193_Contig1472-5 BLOC|complement(20036303..20036494) DBX|Contig2105_Contig7229-3 BLOC|complement(20036571..20036825) } EVD { PRG|blastx_masked DB|aa_SPTR.dmel CLA|protein DT|20041008 DBX|P22465 BLOC|complement(20036640..20036825) DBX|Q8IRZ3 BLOC|complement(20031571..20031915,20031923..20032912,20033291..20033467, |20035421..20035510,20036017..20036199) DBX|Q8IRZ3 BLOC|complement(20036219..20036488) DBX|Q9VXG3 BLOC|complement(20036640..20036795) } EVD { PRG|tblastx_masked DB|na_dbEST.insect CLA|EST DBX|BX553370 BLOC|complement(20035791..20035916,20036312..20036488,20036574..20036696) DBX|BX559312 BLOC|complement(20035791..20035916,20036303..20036488,20036574..20036768) DBX|BX550006 BLOC|complement(20035851..20035913,20036312..20036488,20036574..20036795) } EVD { PRG|blastx_masked DB|aa_SPTR.plant CLA|protein DT|20041008 DBX|AAR25142 BLOC|complement(20036348..20036482,20036646..20036807) } EVD { PRG|tblastxwrap_masked DB|na_scf_chunk_agambiae.fa CLA|DNA DT|20041008 DBX|AAAB01008844.1p1 BLOC|complement(20036306..20036503) DBX|AAAB01005119 BLOC|complement(20036574..20036732) DBX|AAAB01008844.1p1 BLOC|complement(20036574..20036795) DBX|AAAB01001998 BLOC|complement(20036574..20036795) DBX|AAAB01008844.1p1 BLOC|complement(20036574..20036825) DBX|AAAB01008844.1p10 BLOC|complement(20036306..20036494) DBX|AAAB01000648 BLOC|complement(20036306..20036494) DBX|AAAB01008844.1p1 BLOC|complement(20036303..20036503) DBX|AAAB01008844.1p1 BLOC|complement(20036303..20036503) DBX|AAAB01005119 BLOC|complement(20036303..20036503) DBX|AAAB01005119 BLOC|complement(20036306..20036503) } EVD { PRG|blastx_masked DB|aa_SPTR.primate CLA|protein DT|20041008 DBX|CAE46052 BLOC|complement(20035869..20035928,20036312..20036488) } EVD { PRG|sim4 DB|na_transcript.dmel.RELEASE32 CLA|mRNA DT|20041008 DBX|CG33491-RA.32 BLOC|complement(20035860..20035916,20036309..20036490,20036573..20036702) } VERS|4.3 } # EOR GADR { RETE|ID 1 FBan0033499 GID 1 FBgn0053499 GSYM 1 Sdic:CG33499 CGSYM 1 CG33499 ARM 1 X CLOC 1 19C1-19C1 SCAF 1 AE002611 TRREC 1 AALEN 1 543 ID|FBan0033499 SYM|CG33499 GENSR { GSYM|Sdic:CG33499 ID|FBgn0053499 } ARM|X SCAF|AE002611 BLOC|complement(20030809..20035756) CLOCC|19C1-19C1 SQLEN|4948 SYN|unnamed CDNA|LD35918 CMT|comment=Sdic/Cdic-related; one of at least 3 copies produced |by duplication and expansion events. DT|20040816 TRREC { NAM|Sdic:CG33499-RA SYN|FlyBase:FBtr0089612 |FlyBase:FBpp0089014 |GB_protein:AAS65423.1 AANAM|Sdic:CG33499-PA SQLEN|2527 (-) AALEN|543 BLOC|complement(20030809..20031921,20031989..20032911,20033290..20033466, |20035375..20035502,20035571..20035756) CDS|complement(20031571..20031921,20031989..20032911,20033290..20033466, |20035375..20035502,20035571..20035620) DT|20031111 } EVD { PRG|blastx_masked DB|aa_SPTR.othinv CLA|protein DT|20041008 DBX|P54703 BLOC|complement(20031580..20031936,20031989..20032912) DBX|Q8X179 BLOC|complement(20031571..20031894,20031947..20032927) DBX|Q7QF61 BLOC|complement(20031574..20031924,20031989..20032912,20033294..20033470) } EVD { PRG|genie_masked DB|dummy CLA|genie_masked DT|20041008 BLOC|complement(20008271..20008546,20008614..20009536,20009920..20010096, |20011952..20012079,20012395..20012456,20012886..20013067,20013154..20013361, |20016015..20016362,20016430..20017352,20017731..20017907,20019816..20019897, |20020750..20020931,20021026..20021233,20023796..20025069,20025448..20025624, |20027515..20027642,20027958..20028019,20028449..20028630,20028713..20028920, |20031574..20031921,20031989..20032911,20033290..20033466,20035375..20035456, |20036309..20036490,20036573..20036702) } EVD { PRG|tblastx_masked DB|na_dbEST.insect CLA|EST DBX|BM617837 BLOC|complement(20031703..20031792,20031814..20031924,20031989..20032483) DBX|BI514249 BLOC|complement(20032229..20032780) DBX|AU004279 BLOC|complement(20032280..20032906) } EVD { PRG|tblastxwrap_masked DB|na_scf_chunk_agambiae.fa CLA|DNA DT|20041008 DBX|AAAB01008846.1p57 BLOC|complement(20032382..20032756) DBX|AAAB01008846.1p57 BLOC|complement(20032760..20032912) DBX|AAAB01008846.1p57 BLOC|complement(20033309..20033455) DBX|AAAB01008846.1p57 BLOC|complement(20034922..20035005) DBX|AAAB01008846.1p57 BLOC|complement(20035373..20035513) DBX|AAAB01008846.1p57 BLOC|complement(20031574..20031924) DBX|AAAB01008846.1p57 BLOC|complement(20031989..20032378) DBX|AAAB01008846.1p57 BLOC|complement(20032195..20032404) } EVD { PRG|genscan_masked DB|dummy CLA|genscan_masked DT|20041008 BLOC|complement(20008271..20008546,20008614..20009536,20009920..20010096, |20011952..20012079,20012592..20012776,20012886..20013067,20013154..20013361, |20016015..20016362,20016430..20017352,20017731..20017907,20019816..20019943, |20020456..20020640,20020750..20020931,20021026..20021233,20023796..20025069, |20025448..20025624,20027515..20027642,20028155..20028339,20028449..20028630, |20028713..20028920,20031574..20031921,20031989..20032911,20033290..20033466, |20035375..20035502,20036015..20036199,20036309..20036490,20036573..20036780) } EVD { PRG|sim4tandem DB|na_gb.dmel CLA|cDNA DT|20050823 DBX|LD35918 BLOC|complement(20031264..20031921,20031989..20032524) } EVD { PRG|blastx_masked DB|aa_SPTR.insect CLA|protein DT|20041008 DBX|Q7PFZ8 BLOC|complement(20032682..20032912,20033294..20033467) } EVD { PRG|blastx_masked DB|aa_SPTR.rodent CLA|protein DT|20041008 DBX|O88487 BLOC|complement(20031577..20031924,20031989..20032915) DBX|BAC40097 BLOC|complement(20031577..20031924,20031989..20032915) DBX|Q62871 BLOC|complement(20031577..20031924,20031989..20032915) } EVD { PRG|prosplign DB|aa_ncbi_dmel CLA|protein DT|20060123 DBX|AAV36986 BLOC|complement(20031571..20031921,20031989..20032911,20033290..20033466, |20035375..20035504) DBX|AAX33607 BLOC|complement(20031571..20031600,20031631..20032911,20033290..20033466, |20035375..20035502,20035571..20035620) } EVD { PRG|augustus DB|dummy CLA|augustus DT|20050713 BLOC|complement(20023790..20025069,20025448..20025624,20027515..20027596, |20028449..20028630,20028713..20028958,20030901..20030931) BLOC|complement(20031568..20031921,20031989..20032911,20033290..20033466, |20035375..20035456,20036309..20036490,20036573..20036818,20038775..20038805) } EVD { PRG|blastx_masked DB|aa_SPTR.othvert CLA|protein DT|20041008 DBX|AAR11238 BLOC|complement(20031577..20031915) DBX|AAR11237 BLOC|complement(20031577..20031915) DBX|Q98SV2 BLOC|complement(20031577..20031924,20031989..20032915) } EVD { PRG|tblastxwrap_masked DB|na_baylorf1_scfchunk.dpse CLA|so DT|20041008 DBX|Contig2105_Contig7229-3 BLOC|complement(20031571..20031924) DBX|Contig2105_Contig7229-3 BLOC|complement(20031986..20032930) DBX|Contig2105_Contig7229-3 BLOC|complement(20033285..20033470) DBX|Contig2105_Contig7229-3 BLOC|complement(20033359..20033529) DBX|Contig2105_Contig7229-3 BLOC|complement(20034901..20035002) DBX|Contig2105_Contig7229-3 BLOC|complement(20035367..20035507) } EVD { PRG|blastx_masked DB|aa_SPTR.dmel CLA|protein DT|20041008 DBX|Q8T0G8 BLOC|complement(20031953..20032237) DBX|Q8IH37 BLOC|complement(20032291..20032392) DBX|Q8MSA9 BLOC|complement(20031571..20031924,20031989..20032519) DBX|Q8IRZ4 BLOC|complement(20031571..20031753,20031782..20031817,20031853..20031924, |20031989..20032882) DBX|Q24246 BLOC|complement(20031571..20031924,20031989..20032912,20033291..20033443, |20034925..20034987,20035421..20035504) DBX|O96509 BLOC|complement(20031571..20031753,20031782..20031817,20031853..20031924, |20031989..20032912,20033291..20033467,20035421..20035504,20035573..20035620) DBX|Q9W5W4 BLOC|complement(20031571..20031753,20031782..20031817,20031853..20031924, |20031989..20032912,20033291..20033467,20035421..20035504,20035573..20035620) DBX|Q8IRZ3 BLOC|complement(20031571..20031915,20031923..20032912,20033291..20033467, |20035421..20035510,20036017..20036199) } EVD { PRG|blastx_masked DB|aa_SPTR.plant CLA|protein DT|20041008 DBX|Q39578 BLOC|complement(20032289..20032828) DBX|P27766 BLOC|complement(20031965..20032867) } EVD { PRG|blastx_masked DB|aa_SPTR.worm CLA|protein DT|20041008 DBX|O45087 BLOC|complement(20031574..20031924,20031989..20032930) } EVD { PRG|blastx_masked DB|aa_SPTR.primate CLA|protein DT|20041008 DBX|O14576 BLOC|complement(20031577..20031915,20031989..20032915) DBX|Q13409 BLOC|complement(20031577..20031924,20031989..20032915) DBX|Q8IY52 BLOC|complement(20031989..20032915) } VERS|4.3 } # EOR GADR { RETE|ID 1 FBan0033487 GID 1 FBgn0053487 GSYM 1 CG33487 CGSYM 1 CG33487 ARM 1 X CLOC 1 19C1-19C1 SCAF 1 AE002611 TRREC 1 AALEN 1 122 ID|FBan0033487 SYM|CG33487 GENSR { GSYM|CG33487 ID|FBgn0053487 } ARM|X SCAF|AE002611 BLOC|complement(20028000..20028842) CLOCC|19C1-19C1 SQLEN|843 CMT|comment=Gene remnant homologous to 3' end of AnnX; by-product |of duplication event. DT|20040816 TRREC { NAM|CG33487-RA SYN|FlyBase:FBtr0089464 |FlyBase:FBpp0089018 |GB_protein:AAS65422.1 AANAM|CG33487-PA SQLEN|369 (-) AALEN|122 BLOC|complement(20028000..20028056,20028449..20028630,20028713..20028842) CDS|complement(20028003..20028056,20028449..20028630,20028713..20028842) DT|20031111 } EVD { PRG|blastx_masked DB|aa_SPTR.othinv CLA|protein DT|20041008 DBX|Q7QM49 BLOC|complement(20028003..20028053,20028452..20028628) } EVD { PRG|genie_masked DB|dummy CLA|genie_masked DT|20041008 BLOC|complement(20008271..20008546,20008614..20009536,20009920..20010096, |20011952..20012079,20012395..20012456,20012886..20013067,20013154..20013361, |20016015..20016362,20016430..20017352,20017731..20017907,20019816..20019897, |20020750..20020931,20021026..20021233,20023796..20025069,20025448..20025624, |20027515..20027642,20027958..20028019,20028449..20028630,20028713..20028920, |20031574..20031921,20031989..20032911,20033290..20033466,20035375..20035456, |20036309..20036490,20036573..20036702) } EVD { PRG|tblastx_masked DB|na_dbEST.insect CLA|EST DBX|BX550006 BLOC|complement(20028000..20028053,20028452..20028628,20028714..20028935) } EVD { PRG|tblastxwrap_masked DB|na_scf_chunk_agambiae.fa CLA|DNA DT|20041008 DBX|AAAB01005119 BLOC|complement(20028446..20028643) DBX|AAAB01005119 BLOC|complement(20028714..20028872) DBX|AAAB01008844.1p1 BLOC|complement(20028714..20028935) DBX|AAAB01001998 BLOC|complement(20028714..20028935) DBX|AAAB01008844.1p1 BLOC|complement(20028714..20028965) DBX|AAAB01008844.1p10 BLOC|complement(20028446..20028634) DBX|AAAB01000648 BLOC|complement(20028446..20028634) DBX|AAAB01008844.1p1 BLOC|complement(20028443..20028643) DBX|AAAB01008844.1p1 BLOC|complement(20028443..20028643) DBX|AAAB01005119 BLOC|complement(20028443..20028643) DBX|AAAB01008844.1p1 BLOC|complement(20028446..20028643) } EVD { PRG|sim4 DB|na_transcript.dmel.RELEASE32 CLA|mRNA DT|20041008 DBX|CG33496-RA.32 BLOC|complement(20028000..20028056,20028449..20028630,20028713..20028842) DBX|CG33487-RA.32 BLOC|complement(20028000..20028056,20028449..20028630,20028713..20028842) DBX|CG33498-RA.32 BLOC|complement(20028000..20028056,20028449..20028630,20028713..20028842) } EVD { PRG|sim4 DB|na_transcript.dmel.RELEASE31 CLA|mRNA DT|20041008 DBX|CG32823-RB.31 BLOC|complement(20023790..20025069,20025448..20025624,20027515..20027642, |20028155..20028339,20028449..20028630,20028713..20028842) } EVD { PRG|genscan_masked DB|dummy CLA|genscan_masked DT|20041008 BLOC|complement(20008271..20008546,20008614..20009536,20009920..20010096, |20011952..20012079,20012592..20012776,20012886..20013067,20013154..20013361, |20016015..20016362,20016430..20017352,20017731..20017907,20019816..20019943, |20020456..20020640,20020750..20020931,20021026..20021233,20023796..20025069, |20025448..20025624,20027515..20027642,20028155..20028339,20028449..20028630, |20028713..20028920,20031574..20031921,20031989..20032911,20033290..20033466, |20035375..20035502,20036015..20036199,20036309..20036490,20036573..20036780) } EVD { PRG|blastx_masked DB|aa_SPTR.insect CLA|protein DT|20041008 DBX|Q9NL52 BLOC|complement(20028458..20028628,20028780..20028851) DBX|Q7PDX4 BLOC|complement(20028458..20028625,20028780..20028851) DBX|Q9NL54 BLOC|complement(20028458..20028628,20028780..20028851) } EVD { PRG|blastx_masked DB|aa_SPTR.rodent CLA|protein DT|20041008 DBX|P07356 BLOC|complement(20028009..20028071,20028431..20028622) DBX|Q9CVK5 BLOC|complement(20028452..20028625,20028780..20028854) DBX|Q9CZI7 BLOC|complement(20028009..20028071,20028431..20028622) } EVD { PRG|augustus DB|dummy CLA|augustus DT|20050713 BLOC|complement(20023790..20025069,20025448..20025624,20027515..20027596, |20028449..20028630,20028713..20028958,20030901..20030931) } EVD { PRG|blastx_masked DB|aa_SPTR.othvert CLA|protein DT|20041008 DBX|P04272 BLOC|complement(20028009..20028071,20028431..20028622) DBX|O57570 BLOC|complement(20028452..20028628) DBX|AAP20190 BLOC|complement(20028449..20028628,20028783..20028908) } EVD { PRG|tblastxwrap_masked DB|na_baylorf1_scfchunk.dpse CLA|so DT|20041008 DBX|Contig2105_Contig7229-3 BLOC|complement(20028443..20028631) DBX|Contig1193_Contig1472-5 BLOC|complement(20028443..20028634) DBX|Contig2105_Contig7229-3 BLOC|complement(20028711..20028965) } EVD { PRG|blastx_masked DB|aa_SPTR.dmel CLA|protein DT|20041008 DBX|Q8IRZ3 BLOC|complement(20023793..20025070,20025449..20025625,20027561..20027650, |20028157..20028339) DBX|Q8IRZ3 BLOC|complement(20028359..20028628) DBX|Q9VXG4 BLOC|complement(20028780..20028935) DBX|Q9VXG3 BLOC|complement(20028780..20028935) DBX|P22464 BLOC|complement(20028780..20028962) DBX|P22465 BLOC|complement(20028780..20028965) } EVD { PRG|blastx_masked DB|aa_SPTR.plant CLA|protein DT|20041008 DBX|AAR25142 BLOC|complement(20020732..20020932,20021099..20021275,20028488..20028622, |20028786..20028947) } EVD { PRG|blastx_masked DB|aa_SPTR.worm CLA|protein DT|20041008 DBX|Q27864 BLOC|complement(20028404..20028604,20028780..20028965) } EVD { PRG|blastx_masked DB|aa_SPTR.primate CLA|protein DT|20041008 DBX|P07355 BLOC|complement(20028009..20028071,20028431..20028622) DBX|AAH66955 BLOC|complement(20028009..20028071,20028431..20028622) DBX|CAE46052 BLOC|complement(20028009..20028068,20028452..20028628) } VERS|4.3 } # EOR GADR { RETE|ID 1 FBan0032823 GID 1 FBgn0052823 GSYM 1 Sdic:CG32823 CGSYM 1 CG32823 ARM 1 X CLOC 1 19C1-19C1 SCAF 1 AE002611 TRREC 1 AALEN 1 544 ID|FBan0032823 SYM|CG32823 GENSR { GSYM|Sdic:CG32823 ID|FBgn0052823 } ARM|X SCAF|AE002611 BLOC|complement(20023137..20027867) CLOCC|19C1-19C1 SQLEN|4731 GO|lipid metabolism ; GO:0006629 |structural constituent of cytoskeleton ; GO:0005200 |RNA localization ; GO:0006403 |vesicle-mediated transport ; GO:0016192 |mitosis ; GO:0007067 |nucleobase, nucleoside, nucleotide and nucleic acid metabolism ; GO:0006139 |calcium ion binding ; GO:0005509 |cell cycle ; GO:0007049 ID2|FBan0032823 EST|SD04265 |GH22471 |GM13350 CDNA|AT17034 CMT|comment=Sdic/Cdic-related; one of at least 3 copies produced |by duplication and expansion events. DT|20040816 TRREC { NAM|Sdic:CG32823-RB SYN|FlyBase:FBtr0089465 |FlyBase:FBpp0088472 |GB_protein:AAN08994.1 |GB_protein:AAN08994.2 |FlyBase:FBgn0077181 |FlyBase Annotation IDs:GA17167 |Dpse\GA17167 AANAM|Sdic:CG32823-PB SQLEN|2395 (-) AALEN|544 BLOC|complement(20023137..20025069,20025448..20025624,20027515..20027642, |20027711..20027867) CDS|complement(20023793..20025069,20025448..20025624,20027515..20027642, |20027711..20027760) CMT|protein_id=AAN08994 |comment=based on homology to the obsolete gene model for Dmel |CG32823-PB amino acids 1..693 in release 3.1 DT|20031111 } EVD { PRG|blastx_masked DB|aa_SPTR.othinv CLA|protein DT|20041008 DBX|Q8X179 BLOC|complement(20023967..20025085) DBX|Q7QF61 BLOC|complement(20023796..20025070,20025452..20025628) DBX|P54703 BLOC|complement(20023775..20025070,20025703..20025918) } EVD { PRG|genie_masked DB|dummy CLA|genie_masked DT|20041008 BLOC|complement(20008271..20008546,20008614..20009536,20009920..20010096, |20011952..20012079,20012395..20012456,20012886..20013067,20013154..20013361, |20016015..20016362,20016430..20017352,20017731..20017907,20019816..20019897, |20020750..20020931,20021026..20021233,20023796..20025069,20025448..20025624, |20027515..20027642,20027958..20028019,20028449..20028630,20028713..20028920, |20031574..20031921,20031989..20032911,20033290..20033466,20035375..20035456, |20036309..20036490,20036573..20036702) } EVD { PRG|tblastx_masked DB|na_dbEST.insect CLA|EST DBX|BM617837 BLOC|complement(20023895..20023984,20024006..20024641,20024376..20024642) DBX|BI514249 BLOC|complement(20024387..20024938) DBX|AU004279 BLOC|complement(20024438..20025064) } EVD { PRG|tblastxwrap_masked DB|na_scf_chunk_agambiae.fa CLA|DNA DT|20041008 DBX|AAAB01008846.1p57 BLOC|complement(20024540..20024914) DBX|AAAB01008846.1p57 BLOC|complement(20024918..20025070) DBX|AAAB01008846.1p57 BLOC|complement(20025467..20025613) DBX|AAAB01008846.1p57 BLOC|complement(20027080..20027163) DBX|AAAB01008846.1p57 BLOC|complement(20027513..20027653) DBX|AAAB01008846.1p57 BLOC|complement(20023820..20024119) DBX|AAAB01008846.1p57 BLOC|complement(20024177..20024536) DBX|AAAB01008846.1p57 BLOC|complement(20024353..20024562) } EVD { PRG|sim4 DB|na_dbEST.same.dmel CLA|EST DBX|GH22471.3prime BLOC|complement(20023299..20023798) } EVD { PRG|sim4 DB|na_transcript.dmel.RELEASE32 CLA|mRNA DT|20041008 DBX|CG32823-RB.32 BLOC|complement(20023137..20025069,20025448..20025624,20027515..20027642, |20027711..20027867) } EVD { PRG|sim4 DB|na_transcript.dmel.RELEASE31 CLA|mRNA DT|20041008 DBX|CG32823-RB.31 BLOC|complement(20023790..20025069,20025448..20025624,20027515..20027642, |20028155..20028339,20028449..20028630,20028713..20028842) } EVD { PRG|genscan_masked DB|dummy CLA|genscan_masked DT|20041008 BLOC|complement(20008271..20008546,20008614..20009536,20009920..20010096, |20011952..20012079,20012592..20012776,20012886..20013067,20013154..20013361, |20016015..20016362,20016430..20017352,20017731..20017907,20019816..20019943, |20020456..20020640,20020750..20020931,20021026..20021233,20023796..20025069, |20025448..20025624,20027515..20027642,20028155..20028339,20028449..20028630, |20028713..20028920,20031574..20031921,20031989..20032911,20033290..20033466, |20035375..20035502,20036015..20036199,20036309..20036490,20036573..20036780) } EVD { PRG|blastx_masked DB|aa_SPTR.insect CLA|protein DT|20041008 DBX|Q7PFZ8 BLOC|complement(20024840..20025070,20025452..20025625) } EVD { PRG|blastx_masked DB|aa_SPTR.rodent CLA|protein DT|20041008 DBX|Q62871 BLOC|complement(20023820..20025073) DBX|O88487 BLOC|complement(20023820..20025073) DBX|BAC40097 BLOC|complement(20023820..20025073) } EVD { PRG|prosplign DB|aa_ncbi_dmel CLA|protein DT|20060123 DBX|AAV36986 BLOC|complement(20023793..20023822,20023823..20024107,20024159..20025069, |20025448..20025624,20027515..20027644,20027886..20027903) DBX|AAX33607 BLOC|complement(20023793..20025069,20025448..20025624,20027515..20027642, |20027711..20027760) } EVD { PRG|augustus DB|dummy CLA|augustus DT|20050713 BLOC|complement(20016009..20016362,20016430..20017352,20017731..20017907, |20019816..20019897,20020750..20020931,20021026..20021271,20023229..20023259) BLOC|complement(20023790..20025069,20025448..20025624,20027515..20027596, |20028449..20028630,20028713..20028958,20030901..20030931) } EVD { PRG|tblastxwrap_masked DB|na_baylorf1_scfchunk.dpse CLA|so DT|20041008 DBX|Contig2105_Contig7229-3 BLOC|complement(20023820..20024137) DBX|Contig2105_Contig7229-3 BLOC|complement(20024177..20025088) DBX|Contig2105_Contig7229-3 BLOC|complement(20025443..20025628) DBX|Contig2105_Contig7229-3 BLOC|complement(20025517..20025687) DBX|Contig2105_Contig7229-3 BLOC|complement(20027059..20027160) DBX|Contig2105_Contig7229-3 BLOC|complement(20027507..20027647) } EVD { PRG|blastx_masked DB|aa_SPTR.othvert CLA|protein DT|20041008 DBX|AAR11238 BLOC|complement(20023820..20024110) DBX|AAR11237 BLOC|complement(20023820..20024110) DBX|Q98SV2 BLOC|complement(20023820..20025073) } EVD { PRG|sim4 DB|na_dbEST.diff.dmel CLA|EST DBX|SD04265.3prime BLOC|complement(20025485..20025888) DBX|GM13350.5prime BLOC|complement(20024317..20024515) } EVD { PRG|blastx_masked DB|aa_SPTR.dmel CLA|protein DT|20041008 DBX|Q8IH37 BLOC|complement(20024449..20024550) DBX|Q8MSA9 BLOC|complement(20023793..20024677) DBX|Q8MTB1 BLOC|complement(20023820..20024971) DBX|Q9W3L0 BLOC|complement(20023820..20024971) DBX|Q8IRZ4 BLOC|complement(20023793..20023945,20023974..20024006,20024087..20025040) DBX|Q9VTM3 BLOC|complement(20023820..20025064) DBX|Q24246 BLOC|complement(20023793..20025070,20025449..20025601,20027083..20027145, |20027561..20027644) DBX|Q9W5W4 BLOC|complement(20023793..20023945,20023974..20024006,20024087..20025070, |20025449..20025625,20027561..20027644,20027713..20027760) DBX|O96509 BLOC|complement(20023793..20023945,20023974..20024006,20024087..20025070, |20025449..20025625,20027561..20027644,20027713..20027760) DBX|Q8IRZ3 BLOC|complement(20023793..20025070,20025449..20025625,20027561..20027650, |20028157..20028339) } EVD { PRG|splign DB|na_cDNA_ncbi CLA|cDNA DT|20050907 DBX|AT17034 BLOC|complement(20023298..20023644,20023676..20025069,20025448..20025624, |20027515..20027642,20027711..20027857) } EVD { PRG|blastx_masked DB|aa_SPTR.plant CLA|protein DT|20041008 DBX|Q39578 BLOC|complement(20023820..20024986) DBX|P27766 BLOC|complement(20023808..20025025) } EVD { PRG|blastx_masked DB|aa_SPTR.primate CLA|protein DT|20041008 DBX|Q13409 BLOC|complement(20023820..20025073) DBX|CAD97654 BLOC|complement(20023820..20025073) DBX|AAP35794 BLOC|complement(20023820..20025073) } VERS|4.3 } # EOR GADR { RETE|ID 1 FBan0033496 GID 1 FBgn0053496 GSYM 1 CG33496 CGSYM 1 CG33496 ARM 1 X CLOC 1 19C1-19C1 SCAF 1 AE002611 TRREC 1 AALEN 1 122 ID|FBan0033496 SYM|CG33496 GENSR { GSYM|CG33496 ID|FBgn0053496 } ARM|X SCAF|AE002611 BLOC|complement(20020301..20021155) CLOCC|19C1-19C1 SQLEN|855 CMT|comment=Gene remnant homologous to 3' end of AnnX; by-product |of duplication event. DT|20040816 TRREC { NAM|CG33496-RA SYN|FlyBase:FBtr0089609 |FlyBase:FBpp0089015 |GB_protein:AAS65421.1 AANAM|CG33496-PA SQLEN|369 (-) AALEN|122 BLOC|complement(20020301..20020357,20020750..20020931,20021026..20021155) CDS|complement(20020304..20020357,20020750..20020931,20021026..20021155) DT|20031111 } EVD { PRG|blastx_masked DB|aa_SPTR.othinv CLA|protein DT|20041008 DBX|Q7QM49 BLOC|complement(20020304..20020354,20020753..20020932) DBX|Q7QG24 BLOC|complement(20020702..20020932,20021093..20021275) } EVD { PRG|genscan_masked DB|dummy CLA|genscan_masked DT|20041008 BLOC|complement(20008271..20008546,20008614..20009536,20009920..20010096, |20011952..20012079,20012592..20012776,20012886..20013067,20013154..20013361, |20016015..20016362,20016430..20017352,20017731..20017907,20019816..20019943, |20020456..20020640,20020750..20020931,20021026..20021233,20023796..20025069, |20025448..20025624,20027515..20027642,20028155..20028339,20028449..20028630, |20028713..20028920,20031574..20031921,20031989..20032911,20033290..20033466, |20035375..20035502,20036015..20036199,20036309..20036490,20036573..20036780) } EVD { PRG|blastx_masked DB|aa_SPTR.insect CLA|protein DT|20041008 DBX|Q7PDX4 BLOC|complement(20020759..20020932,20021093..20021164) DBX|Q7PFU3 BLOC|complement(20020304..20020360,20020753..20020932,20021093..20021275) DBX|Q7PS96 BLOC|complement(20020304..20020354,20020753..20020932,20021093..20021275) } EVD { PRG|blastx_masked DB|aa_SPTR.rodent CLA|protein DT|20041008 DBX|Q9CVK5 BLOC|complement(20020753..20020932,20021093..20021167) DBX|Q921D0 BLOC|complement(20020307..20020357,20020738..20020932,20021102..20021224) DBX|Q8VIN2 BLOC|complement(20020732..20020932,20021096..20021275) } EVD { PRG|augustus DB|dummy CLA|augustus DT|20050713 BLOC|complement(20016009..20016362,20016430..20017352,20017731..20017907, |20019816..20019897,20020750..20020931,20021026..20021271,20023229..20023259) } EVD { PRG|genie_masked DB|dummy CLA|genie_masked DT|20041008 BLOC|complement(20008271..20008546,20008614..20009536,20009920..20010096, |20011952..20012079,20012395..20012456,20012886..20013067,20013154..20013361, |20016015..20016362,20016430..20017352,20017731..20017907,20019816..20019897, |20020750..20020931,20021026..20021233,20023796..20025069,20025448..20025624, |20027515..20027642,20027958..20028019,20028449..20028630,20028713..20028920, |20031574..20031921,20031989..20032911,20033290..20033466,20035375..20035456, |20036309..20036490,20036573..20036702) } EVD { PRG|tblastxwrap_masked DB|na_baylorf1_scfchunk.dpse CLA|so DT|20041008 DBX|Contig2105_Contig7229-3 BLOC|complement(20020744..20020932) DBX|Contig1193_Contig1472-5 BLOC|complement(20020744..20020935) DBX|Contig2105_Contig7229-3 BLOC|complement(20021024..20021278) } EVD { PRG|blastx_masked DB|aa_SPTR.dmel CLA|protein DT|20041008 DBX|P22465 BLOC|complement(20020738..20020932,20021093..20021278) DBX|Q8IRZ3 BLOC|complement(20016012..20016356,20016364..20017353,20017732..20017908, |20019862..20019951,20020458..20020640) DBX|Q8IRZ3 BLOC|complement(20020660..20020932) DBX|P22464 BLOC|complement(20020759..20020932) } EVD { PRG|tblastx_masked DB|na_dbEST.insect CLA|EST DBX|BX559312 BLOC|complement(20020232..20020357,20020744..20020932,20021027..20021221) DBX|BX550006 BLOC|complement(20020292..20020354,20020753..20020932,20021027..20021248) } EVD { PRG|blastx_masked DB|aa_SPTR.plant CLA|protein DT|20041008 DBX|AAR25142 BLOC|complement(20020732..20020932,20021099..20021275,20028488..20028622, |20028786..20028947) } EVD { PRG|blastx_masked DB|aa_SPTR.worm CLA|protein DT|20041008 DBX|Q27864 BLOC|complement(20020705..20020932,20021093..20021278) } EVD { PRG|tblastxwrap_masked DB|na_scf_chunk_agambiae.fa CLA|DNA DT|20041008 DBX|AAAB01005119 BLOC|complement(20020747..20020944) DBX|AAAB01005119 BLOC|complement(20021027..20021185) DBX|AAAB01008844.1p1 BLOC|complement(20021027..20021248) DBX|AAAB01001998 BLOC|complement(20021027..20021248) DBX|AAAB01008844.1p1 BLOC|complement(20021027..20021278) DBX|AAAB01008844.1p10 BLOC|complement(20020747..20020935) DBX|AAAB01000648 BLOC|complement(20020747..20020935) DBX|AAAB01008844.1p1 BLOC|complement(20020744..20020944) DBX|AAAB01008844.1p1 BLOC|complement(20020744..20020944) DBX|AAAB01005119 BLOC|complement(20020744..20020944) DBX|AAAB01008844.1p1 BLOC|complement(20020747..20020944) } EVD { PRG|blastx_masked DB|aa_SPTR.primate CLA|protein DT|20041008 DBX|CAE46052 BLOC|complement(20020310..20020369,20020753..20020932) DBX|BAC85290 BLOC|complement(20020310..20020360,20020753..20020932,20021096..20021245) DBX|P12429 BLOC|complement(20020753..20020932,20021096..20021275) } VERS|4.3 } # EOR GADR { RETE|ID 1 FBan0033497 GID 1 FBgn0053497 GSYM 1 Sdic:CG33497 CGSYM 1 CG33497 ARM 1 X CLOC 1 19C1-19C1 SCAF 1 AE002611 TRREC 1 AALEN 1 543 ID|FBan0033497 SYM|CG33497 GENSR { GSYM|Sdic:CG33497 ID|FBgn0053497 } ARM|X SCAF|AE002611 BLOC|complement(20015709..20020158) CLOCC|19C1-19C1 SQLEN|4450 EST|EK106840 |EK297256 |AM02247 |GM09869 |EP12538 |GM04415 |AT13301 |EK199960 |AT27463 |EP10458 |EK103725 |EK065063 |EK052248 |EK255354 |EK216743 |UT01049 |AT07009 |LD42953 |GH16652 |LD22777 |LD35918 |LP14645 |EK142605 |EK267631 |EK266072 |EK153659 |EK267964 |EK174339 |EK225309 |EK261510 |EK027548 |EK280036 CDNA|LD35918 CMT|comment=Sdic/Cdic-related; one of at least 3 copies produced |by duplication and expansion events. DT|20040816 TRREC { NAM|Sdic:CG33497-RA SYN|FlyBase:FBtr0089610 |FlyBase:FBpp0089016 |GB_protein:AAS65420.1 AANAM|Sdic:CG33497-PA SQLEN|2029 (-) AALEN|543 BLOC|complement(20015709..20016362,20016430..20017352,20017731..20017907, |20019816..20019943,20020012..20020158) CDS|complement(20016012..20016362,20016430..20017352,20017731..20017907, |20019816..20019943,20020012..20020061) DT|20031111 } EVD { PRG|blastx_masked DB|aa_SPTR.othinv CLA|protein DT|20041008 DBX|P54703 BLOC|complement(20016021..20016377,20016430..20017353) DBX|Q8X179 BLOC|complement(20016012..20016335,20016388..20017368) DBX|Q7QF61 BLOC|complement(20016015..20016365,20016430..20017353,20017735..20017911) } EVD { PRG|sim4 DB|na_ARGsCDS.dros CLA|mRNA DT|20041008 DBX|CDS-Cdic-RC BLOC|complement(20016012..20016362,20016430..20017352,20017731..20017886, |20019807..20019947) DBX|CDS-Cdic-RB BLOC|complement(20016012..20016362,20016430..20017352,20017731..20017886, |20019807..20019947) DBX|CDS-Cdic-RK BLOC|complement(20016012..20016362,20016430..20017352,20017731..20017885, |20019365..20019397,20019816..20019947) DBX|CDS-Cdic-RA BLOC|complement(20016012..20016362,20016430..20017352,20017731..20017924, |20019812..20019947) DBX|CDS-Cdic-RI BLOC|complement(20016012..20016362,20016430..20017352,20017731..20017907, |20019816..20019947) } EVD { PRG|genie_masked DB|dummy CLA|genie_masked DT|20041008 BLOC|complement(20008271..20008546,20008614..20009536,20009920..20010096, |20011952..20012079,20012395..20012456,20012886..20013067,20013154..20013361, |20016015..20016362,20016430..20017352,20017731..20017907,20019816..20019897, |20020750..20020931,20021026..20021233,20023796..20025069,20025448..20025624, |20027515..20027642,20027958..20028019,20028449..20028630,20028713..20028920, |20031574..20031921,20031989..20032911,20033290..20033466,20035375..20035456, |20036309..20036490,20036573..20036702) } EVD { PRG|tblastx_masked DB|na_dbEST.insect CLA|EST DBX|AU004279 BLOC|complement(20016721..20017347) DBX|BM617837 BLOC|complement(20016144..20016233,20016255..20016365,20016430..20016924) DBX|BI514249 BLOC|complement(20016670..20017221) } EVD { PRG|tblastxwrap_masked DB|na_scf_chunk_agambiae.fa CLA|DNA DT|20041008 DBX|AAAB01008846.1p57 BLOC|complement(20016823..20017197) DBX|AAAB01008846.1p57 BLOC|complement(20017201..20017353) DBX|AAAB01008846.1p57 BLOC|complement(20017750..20017896) DBX|AAAB01008846.1p57 BLOC|complement(20019363..20019446) DBX|AAAB01008846.1p57 BLOC|complement(20019814..20019954) DBX|AAAB01008846.1p57 BLOC|complement(20016015..20016365) DBX|AAAB01008846.1p57 BLOC|complement(20016430..20016819) DBX|AAAB01008846.1p57 BLOC|complement(20016636..20016845) } EVD { PRG|sim4 DB|na_dbEST.same.dmel CLA|EST DBX|LD42953.3prime BLOC|complement(20015246..20015811) DBX|GH16652.3prime BLOC|complement(20015251..20015977) DBX|LD22777.3prime BLOC|complement(20015709..20016234) DBX|LD35918.3prime BLOC|complement(20015709..20016361) DBX|LP14645.5prime BLOC|complement(20016787..20017352,20017731..20017880) } EVD { PRG|sim4 DB|na_transcript.dmel.RELEASE32 CLA|mRNA DT|20041008 DBX|CG33497-RA.32 BLOC|complement(20015709..20016362,20016430..20017352,20017731..20017907, |20019816..20019943,20020012..20020158) DBX|CG33499-RA.32 BLOC|complement(20015250..20016362,20016430..20017352,20017731..20017907, |20019816..20019943,20020012..20020197) } EVD { PRG|sim4 DB|na_transcript.dmel.RELEASE31 CLA|mRNA DT|20041008 DBX|CG18000-RA.31 BLOC|complement(20015403..20016362,20016430..20017352,20017731..20017924, |20019812..20019947) DBX|CG18000-RB.31 BLOC|complement(20015403..20016362,20016430..20017352,20017731..20017886, |20019807..20019947) DBX|CG18000-RC.31 BLOC|complement(20015403..20016362,20016430..20017352,20017731..20017886, |20019807..20019947) DBX|CG18000-RG.31 BLOC|complement(20015403..20016362,20016430..20017352,20017731..20017888, |20019816..20019947) DBX|CG18000-RH.31 BLOC|complement(20015403..20016362,20016430..20017352,20017731..20017885, |20019816..20019947) DBX|CG18000-RI.31 BLOC|complement(20015403..20016362,20016430..20017352,20017731..20017907, |20019816..20019947) DBX|CG18000-RJ.31 BLOC|complement(20015403..20016362,20016430..20017352,20017731..20017885, |20019365..20019427,20019816..20019947) DBX|CG18000-RK.31 BLOC|complement(20015403..20016362,20016430..20017352,20017731..20017885, |20019365..20019397,20019816..20019947) } EVD { PRG|genscan_masked DB|dummy CLA|genscan_masked DT|20041008 BLOC|complement(20008271..20008546,20008614..20009536,20009920..20010096, |20011952..20012079,20012592..20012776,20012886..20013067,20013154..20013361, |20016015..20016362,20016430..20017352,20017731..20017907,20019816..20019943, |20020456..20020640,20020750..20020931,20021026..20021233,20023796..20025069, |20025448..20025624,20027515..20027642,20028155..20028339,20028449..20028630, |20028713..20028920,20031574..20031921,20031989..20032911,20033290..20033466, |20035375..20035502,20036015..20036199,20036309..20036490,20036573..20036780) } EVD { PRG|sim4tandem DB|na_gb.dmel CLA|so DT|20050823 DBX|LD35918 BLOC|complement(20015705..20016362,20016430..20016965) DBX|AF070689 BLOC|complement(20015403..20016362,20016430..20017352,20017731..20017924, |20019812..20019947) DBX|AF070691 BLOC|complement(20016009..20016362,20016430..20017352,20017731..20017886, |20019807..20019947) DBX|AF070697 BLOC|complement(20016009..20016362,20016430..20017352,20017731..20017907, |20019816..20019947) DBX|AF070690 BLOC|complement(20016009..20016362,20016430..20017352,20017731..20017886, |20019807..20019947) DBX|AF070698 BLOC|complement(20016009..20016362,20016430..20017352,20017731..20017885, |20019365..20019427,20019816..20019947) DBX|AF070699 BLOC|complement(20016009..20016362,20016430..20017352,20017731..20017885, |20019365..20019397,20019816..20019947) } EVD { PRG|blastx_masked DB|aa_SPTR.insect CLA|protein DT|20041008 DBX|Q7PFZ8 BLOC|complement(20017123..20017353,20017735..20017908) } EVD { PRG|prosplign DB|aa_ncbi_dmel CLA|protein DT|20060123 DBX|AAV36986 BLOC|complement(20016012..20016362,20016430..20017352,20017731..20017907, |20019816..20019945) DBX|AAX33607 BLOC|complement(20016012..20016041,20016072..20017352,20017731..20017907, |20019816..20019943,20020012..20020061) } EVD { PRG|blastx_masked DB|aa_SPTR.rodent CLA|protein DT|20041008 DBX|O88487 BLOC|complement(20016018..20016365,20016430..20017356) DBX|Q62871 BLOC|complement(20016018..20016365,20016430..20017356) DBX|BAC40097 BLOC|complement(20016018..20016365,20016430..20017356) } EVD { PRG|augustus DB|dummy CLA|augustus DT|20050713 BLOC|complement(20016009..20016362,20016430..20017352,20017731..20017907, |20019816..20019897,20020750..20020931,20021026..20021271,20023229..20023259) } EVD { PRG|blastx_masked DB|aa_SPTR.othvert CLA|protein DT|20041008 DBX|AAR11237 BLOC|complement(20016018..20016356) DBX|AAR11238 BLOC|complement(20016018..20016356) DBX|Q98SV2 BLOC|complement(20016018..20016365,20016430..20017356) } EVD { PRG|tblastxwrap_masked DB|na_baylorf1_scfchunk.dpse CLA|so DT|20041008 DBX|Contig2105_Contig7229-3 BLOC|complement(20016012..20016365) DBX|Contig2105_Contig7229-3 BLOC|complement(20016427..20017371) DBX|Contig2105_Contig7229-3 BLOC|complement(20017726..20017911) DBX|Contig2105_Contig7229-3 BLOC|complement(20017800..20017970) DBX|Contig2105_Contig7229-3 BLOC|complement(20019342..20019443) DBX|Contig2105_Contig7229-3 BLOC|complement(20019808..20019948) } EVD { PRG|blastx_masked DB|aa_SPTR.dmel CLA|protein DT|20041008 DBX|Q8T0G8 BLOC|complement(20016394..20016678) DBX|Q8MSA9 BLOC|complement(20016012..20016365,20016430..20016960) DBX|Q8IRZ4 BLOC|complement(20016012..20016194,20016223..20016258,20016294..20016365, |20016430..20017323) DBX|Q24246 BLOC|complement(20016012..20016365,20016430..20017353,20017732..20017884, |20019366..20019428,20019862..20019945) DBX|Q9W5W4 BLOC|complement(20016012..20016194,20016223..20016258,20016294..20016365, |20016430..20017353,20017732..20017908,20019862..20019945,20020014..20020061) DBX|O96509 BLOC|complement(20016012..20016194,20016223..20016258,20016294..20016365, |20016430..20017353,20017732..20017908,20019862..20019945,20020014..20020061) DBX|Q8IRZ3 BLOC|complement(20016012..20016356,20016364..20017353,20017732..20017908, |20019862..20019951,20020458..20020640) } EVD { PRG|sim4 DB|na_dbEST.diff.dmel CLA|EST DBX|EK106840.5prime BLOC|complement(20016084..20016254) DBX|EK297256.5prime BLOC|complement(20016086..20016254) DBX|AM02247:contig1 BLOC|complement(20016225..20016362,20016430..20016613) DBX|GM09869.5prime BLOC|complement(20016066..20016362,20016430..20016794) DBX|EP12538.3prime BLOC|complement(20016209..20016362,20016430..20016794) DBX|GM04415.5prime BLOC|complement(20016269..20016362,20016430..20016794) DBX|AT13301.5prime BLOC|complement(20016740..20017353) DBX|EK199960.5prime BLOC|complement(20017247..20017594) DBX|AT27463.5prime BLOC|complement(20017132..20017352,20017731..20017849) DBX|EP10458.3prime BLOC|complement(20018984..20019413) DBX|EK103725.5prime BLOC|complement(20015379..20015783) DBX|EK065063.5prime BLOC|complement(20015331..20015812) DBX|EK052248.5prime BLOC|complement(20015645..20015812) DBX|EK255354.5prime BLOC|complement(20015401..20015832) DBX|EK216743.5prime BLOC|complement(20015480..20015970) DBX|UT01049.3prime BLOC|complement(20015684..20016249) DBX|AT07009.5prime BLOC|complement(20016919..20017352,20017731..20017907,20019816..20019873) DBX|EK142605.5prime BLOC|complement(20015800..20016249) DBX|EK267631.5prime BLOC|complement(20015662..20016254) DBX|EK266072.5prime BLOC|complement(20015703..20016254) DBX|EK153659.5prime BLOC|complement(20015705..20016254) DBX|EK267964.5prime BLOC|complement(20015766..20016254) DBX|EK174339.5prime BLOC|complement(20015773..20016254) DBX|EK225309.5prime BLOC|complement(20015781..20016254) DBX|EK261510.5prime BLOC|complement(20015864..20016254) DBX|EK027548.5prime BLOC|complement(20015878..20016254) DBX|EK280036.5prime BLOC|complement(20015984..20016254) } EVD { PRG|blastx_masked DB|aa_SPTR.plant CLA|protein DT|20041008 DBX|Q39578 BLOC|complement(20016730..20017269) DBX|P27766 BLOC|complement(20016406..20017308) } EVD { PRG|blastx_masked DB|aa_SPTR.worm CLA|protein DT|20041008 DBX|O45087 BLOC|complement(20016015..20016365,20016430..20017371) } EVD { PRG|blastx_masked DB|aa_SPTR.primate CLA|protein DT|20041008 DBX|O14576 BLOC|complement(20016018..20016356,20016430..20017356) DBX|Q8IY52 BLOC|complement(20016018..20016356,20016430..20017356) DBX|Q13409 BLOC|complement(20016018..20016365,20016430..20017356) } EVD { PRG|sim4 DB|na_ARGs.dros CLA|mRNA DT|20041008 DBX|Cdic-RJ BLOC|complement(20015403..20016362,20016430..20017352,20017731..20017885, |20019365..20019427,20019816..20019947) DBX|Cdic-RC BLOC|complement(20015403..20016362,20016430..20017352,20017731..20017886, |20019807..20019947) DBX|Cdic-RH BLOC|complement(20015403..20016362,20016430..20017352,20017731..20017885, |20019816..20019947) DBX|Cdic-RG BLOC|complement(20015403..20016362,20016430..20017352,20017731..20017888, |20019816..20019947) DBX|Cdic-RK BLOC|complement(20015403..20016362,20016430..20017352,20017731..20017885, |20019365..20019397,20019816..20019947) DBX|Cdic-RB BLOC|complement(20015403..20016362,20016430..20017352,20017731..20017886, |20019807..20019947) DBX|Cdic-RA BLOC|complement(20015403..20016362,20016430..20017352,20017731..20017924, |20019812..20019947) DBX|Cdic-RI BLOC|complement(20015403..20016362,20016430..20017352,20017731..20017907, |20019816..20019947) } VERS|4.3 } # EOR GADR { RETE|ID 1 FBan0033491 GID 1 FBgn0053491 GSYM 1 CG33491 CGSYM 1 CG33491 ARM 1 X CLOC 1 19C1-19C1 SCAF 1 AE002611 TRREC 1 AALEN 1 122 ID|FBan0033491 SYM|CG33491 GENSR { GSYM|CG33491 ID|FBgn0053491 } ARM|X SCAF|AE002611 BLOC|complement(20012437..20013283) CLOCC|19C1-19C1 SQLEN|847 CMT|comment=Gene remnant homologous to 3' end of AnnX; by-product |of duplication event. DT|20040816 TRREC { NAM|CG33491-RA SYN|FlyBase:FBtr0089603 |FlyBase:FBpp0089019 |GB_protein:AAS65419.1 AANAM|CG33491-PA SQLEN|369 (-) AALEN|122 BLOC|complement(20012437..20012493,20012886..20013067,20013154..20013283) CDS|complement(20012440..20012493,20012886..20013067,20013154..20013283) DT|20031111 } EVD { PRG|blastx_masked DB|aa_SPTR.othinv CLA|protein DT|20041008 DBX|Q7QM49 BLOC|complement(20012440..20012490,20012889..20013065) DBX|Q7QM48 BLOC|complement(20012440..20012496,20012889..20013065) DBX|Q7QG24 BLOC|complement(20012838..20013065,20013221..20013403) } EVD { PRG|genscan_masked DB|dummy CLA|genscan_masked DT|20041008 BLOC|complement(20008271..20008546,20008614..20009536,20009920..20010096, |20011952..20012079,20012592..20012776,20012886..20013067,20013154..20013361, |20016015..20016362,20016430..20017352,20017731..20017907,20019816..20019943, |20020456..20020640,20020750..20020931,20021026..20021233,20023796..20025069, |20025448..20025624,20027515..20027642,20028155..20028339,20028449..20028630, |20028713..20028920,20031574..20031921,20031989..20032911,20033290..20033466, |20035375..20035502,20036015..20036199,20036309..20036490,20036573..20036780) } EVD { PRG|blastx_masked DB|aa_SPTR.insect CLA|protein DT|20041008 DBX|Q9NL52 BLOC|complement(20012895..20013065,20013221..20013292) DBX|Q7PS96 BLOC|complement(20012440..20012490,20012889..20013065,20013221..20013403) DBX|Q7PFU3 BLOC|complement(20012440..20012496,20012889..20013065,20013221..20013403) } EVD { PRG|augustus DB|dummy CLA|augustus DT|20050713 BLOC|complement(20008271..20008546,20008614..20009536,20009920..20010096, |20011952..20012033,20012886..20013067,20013154..20013399,20015342..20015372) } EVD { PRG|genie_masked DB|dummy CLA|genie_masked DT|20041008 BLOC|complement(20008271..20008546,20008614..20009536,20009920..20010096, |20011952..20012079,20012395..20012456,20012886..20013067,20013154..20013361, |20016015..20016362,20016430..20017352,20017731..20017907,20019816..20019897, |20020750..20020931,20021026..20021233,20023796..20025069,20025448..20025624, |20027515..20027642,20027958..20028019,20028449..20028630,20028713..20028920, |20031574..20031921,20031989..20032911,20033290..20033466,20035375..20035456, |20036309..20036490,20036573..20036702) } EVD { PRG|tblastxwrap_masked DB|na_baylorf1_scfchunk.dpse CLA|so DT|20041008 DBX|Contig2105_Contig7229-3 BLOC|complement(20012880..20013068) DBX|Contig1193_Contig1472-5 BLOC|complement(20012880..20013071) DBX|Contig2105_Contig7229-3 BLOC|complement(20013152..20013406) } EVD { PRG|blastx_masked DB|aa_SPTR.dmel CLA|protein DT|20041008 DBX|P22464 BLOC|complement(20012895..20013065) DBX|P22465 BLOC|complement(20012874..20013065,20013221..20013406) DBX|Q9VXG3 BLOC|complement(20012895..20013062) DBX|Q9VXG4 BLOC|complement(20012895..20013062) DBX|Q8IRZ3 BLOC|complement(20008274..20008450,20008447..20008494,20008496..20008540, |20008548..20009537,20009921..20010097,20011998..20012087,20012594..20012767, |20012886..20013065) } EVD { PRG|tblastx_masked DB|na_dbEST.insect CLA|EST DBX|BX559312 BLOC|complement(20012368..20012493,20012880..20013065,20013155..20013349) DBX|BX550006 BLOC|complement(20012437..20012490,20012889..20013065,20013155..20013376) DBX|BX553370 BLOC|complement(20012368..20012493,20012889..20013065,20013155..20013277) } EVD { PRG|blastx_masked DB|aa_SPTR.plant CLA|protein DT|20041008 DBX|Q84Q48 BLOC|complement(20012868..20013062,20013227..20013376) DBX|Q9ZR53 BLOC|complement(20012865..20013065,20013221..20013394) } EVD { PRG|blastx_masked DB|aa_SPTR.worm CLA|protein DT|20041008 DBX|Q27864 BLOC|complement(20012841..20013041,20013221..20013406) } EVD { PRG|tblastxwrap_masked DB|na_scf_chunk_agambiae.fa CLA|DNA DT|20041008 DBX|AAAB01005119 BLOC|complement(20012883..20013080) DBX|AAAB01005119 BLOC|complement(20013137..20013313) DBX|AAAB01008844.1p1 BLOC|complement(20013137..20013376) DBX|AAAB01001998 BLOC|complement(20013155..20013376) DBX|AAAB01008844.1p1 BLOC|complement(20013137..20013406) DBX|AAAB01008844.1p10 BLOC|complement(20012883..20013071) DBX|AAAB01000648 BLOC|complement(20012883..20013071) DBX|AAAB01008844.1p1 BLOC|complement(20012880..20013080) DBX|AAAB01008844.1p1 BLOC|complement(20012880..20013080) DBX|AAAB01005119 BLOC|complement(20012880..20013080) DBX|AAAB01008844.1p1 BLOC|complement(20012883..20013080) } VERS|4.3 } # EOR GADR { RETE|ID 1 FBan0009580 GID 1 FBgn0067861 GSYM 1 Sdic:CG9580 CGSYM 1 CG9580 ARM 1 X CLOC 1 19C1-19C1 SCAF 1 AE002611 TRREC 1 AALEN 1 517 ID|FBan0009580 SYM|CG9580 GENSR { GSYM|Sdic:CG9580 ID|FBgn0067861 } ARM|X SCAF|AE002611 BLOC|complement(20007894..20012333) CLOCC|19C1-19C1 SQLEN|4440 ID2|FBan0009580 |FBgn0031095 |FBgn0025801 SYN|unnamed EST|AT20333 |AT06310 |AT22538 |AT08363 |AT26489 |AT06160 |AT17034 |AT22512 |AT27879 |AT07563 |AT28886 |AT29980 |bs67d10 |AT09851 |AT01927 |AT18086 |AT28968 |AT03643 |EK166908 |AT06118 |AT03036 |AT09304 |AT05054 |AT11629 |AT28940 |AT03059 |AT13950 |AT22777 |LD35918 |GH09508 |LP19964 |AT03212 |AT21420 |AT09105 |AT13515 |bs40c01 |AT13552 |AT18782 |AT14321 |AT14163 |AT28150 |LP02253 |GH16657 |LP16352 |LP03010 |LP10063 |GH28015 |GH22471 AFFY|144095_at |143720_at DT|20040816 TRREC { NAM|Sdic:CG9580-RA SYN|FlyBase:FBtr0089604 |FlyBase:FBpp0088559 |GB_protein:AAF45366.2 |FlyBase:FBgn0081875 |FlyBase Annotation IDs:GA21890 |Dpse\GA21890 AANAM|Sdic:CG9580-PA SQLEN|2067 (-) AALEN|517 BLOC|complement(20007894..20008546,20008614..20009536,20009920..20010096, |20011952..20012079,20012148..20012333) CDS|complement(20008274..20008546,20008614..20009536,20009920..20010096, |20011952..20012079,20012148..20012197) CMT|protein_id=AAF45366 DT|20031111 } EVD { PRG|blastx_masked DB|aa_SPTR.othinv CLA|protein DT|20041008 DBX|Q7S2K7 BLOC|complement(20008557..20009540) DBX|Q7QF61 BLOC|complement(20008277..20008450,20008496..20008648,20008614..20009537, |20009924..20010100) DBX|P54703 BLOC|complement(20008298..20008441,20008447..20008494,20008496..20008591, |20008614..20009537,20010175..20010390) } EVD { PRG|sim4 DB|na_gadfly.dros.RELEASE2 CLA|mRNA DT|20041008 DBX|CT17580.2 BLOC|complement(20007894..20008546,20008614..20009088) } EVD { PRG|genie_masked DB|dummy CLA|genie_masked DT|20041008 BLOC|complement(20008271..20008546,20008614..20009536,20009920..20010096, |20011952..20012079,20012395..20012456,20012886..20013067,20013154..20013361, |20016015..20016362,20016430..20017352,20017731..20017907,20019816..20019897, |20020750..20020931,20021026..20021233,20023796..20025069,20025448..20025624, |20027515..20027642,20027958..20028019,20028449..20028630,20028713..20028920, |20031574..20031921,20031989..20032911,20033290..20033466,20035375..20035456, |20036309..20036490,20036573..20036702) } EVD { PRG|dmel_r3_to_dmel_r4_migration DB|dmel_r3_affy_oligos CLA|oligonucleotide DT|20050125 DBX|144095_at_772 BLOC|complement(20008238..20008262) DBX|144095_at_745 BLOC|complement(20008265..20008289) DBX|144095_at_648 BLOC|complement(20008362..20008386) DBX|144095_at_619 BLOC|complement(20008391..20008415) DBX|144095_at_618 BLOC|complement(20008392..20008416) DBX|144095_at_562 BLOC|complement(20008448..20008472) DBX|144095_at_544 BLOC|complement(20008466..20008490) DBX|144095_at_517 BLOC|complement(20008493..20008517) DBX|143720_at_684 BLOC|complement(20010048..20010072) DBX|143720_at_675 BLOC|complement(20010057..20010081) DBX|143720_at_666 BLOC|complement(20010066..20010090) DBX|143720_at_560 BLOC|complement(20011507..20011531) DBX|143720_at_559 BLOC|complement(20011508..20011532) DBX|143720_at_549 BLOC|complement(20011518..20011542) DBX|143720_at_540 BLOC|complement(20011527..20011551) DBX|143720_at_491 BLOC|complement(20011964..20011988) DBX|143720_at_420 BLOC|complement(20012035..20012059) DBX|144095_at_1069 BLOC|complement(20007941..20007965) DBX|144095_at_1015 BLOC|complement(20007995..20008019) DBX|144095_at_1008 BLOC|complement(20008002..20008026) DBX|144095_at_931 BLOC|complement(20008079..20008103) DBX|144095_at_833 BLOC|complement(20008177..20008201) DBX|144095_at_805 BLOC|complement(20008205..20008229) } EVD { PRG|tblastx_masked DB|na_dbEST.insect CLA|EST DBX|BM617837 BLOC|complement(20008614..20009108) DBX|BI514249 BLOC|complement(20008854..20009405) DBX|AU004279 BLOC|complement(20008905..20009531) } EVD { PRG|tblastxwrap_masked DB|na_scf_chunk_agambiae.fa CLA|DNA DT|20041008 DBX|AAAB01008846.1p57 BLOC|complement(20009007..20009381) DBX|AAAB01008846.1p57 BLOC|complement(20009385..20009537) DBX|AAAB01008846.1p57 BLOC|complement(20009939..20010085) DBX|AAAB01008846.1p57 BLOC|complement(20011499..20011582) DBX|AAAB01008846.1p57 BLOC|complement(20011950..20012090) DBX|AAAB01008846.1p57 BLOC|complement(20008277..20008402) DBX|AAAB01008846.1p57 BLOC|complement(20008614..20009003) DBX|AAAB01008846.1p57 BLOC|complement(20008820..20009029) } EVD { PRG|sim4 DB|na_dbEST.same.dmel CLA|EST DBX|LD35918.5prime BLOC|complement(20008619..20009149) DBX|GH09508.5prime BLOC|complement(20009319..20009536,20009920..20010096,20011952..20012079, |20012148..20012273) DBX|LP19964.5prime BLOC|complement(20009272..20009536,20009920..20010096,20011952..20012079, |20012148..20012283) DBX|LP02253.5prime BLOC|complement(20009361..20009536,20009920..20010096,20011952..20012079, |20012148..20012283) DBX|GH16657.5prime BLOC|complement(20009386..20009536,20009920..20010096,20011952..20012079, |20012148..20012283) DBX|LP16352.5prime BLOC|complement(20009294..20009536,20009920..20010096,20011952..20012079, |20012148..20012285) DBX|LP03010.5prime BLOC|complement(20009359..20009536,20009920..20010096,20011952..20012079, |20012148..20012289) DBX|LP10063.5prime BLOC|complement(20009465..20009536,20009920..20010096,20011952..20012079, |20012148..20012289) DBX|GH28015.5prime BLOC|complement(20009316..20009536,20009920..20010096,20011952..20012079, |20012148..20012290) DBX|GH22471.5prime BLOC|complement(20009318..20009536,20009920..20010096,20011952..20012079, |20012148..20012298) } EVD { PRG|sim4 DB|na_transcript.dmel.RELEASE32 CLA|mRNA DT|20041008 DBX|CG9580-RA.32 BLOC|complement(20007894..20008546,20008614..20009536,20009920..20010096, |20011952..20012079,20012148..20012333) } EVD { PRG|sim4 DB|na_transcript.dmel.RELEASE31 CLA|mRNA DT|20041008 DBX|CG9580-RB.31 BLOC|complement(20007894..20008546,20008614..20009536,20009721..20009762) DBX|CG9580-RA.31 BLOC|complement(20007894..20008546,20008614..20009536,20009920..20010096, |20011952..20012079,20012148..20012286) } EVD { PRG|genscan_masked DB|dummy CLA|genscan_masked DT|20041008 BLOC|complement(20008271..20008546,20008614..20009536,20009920..20010096, |20011952..20012079,20012592..20012776,20012886..20013067,20013154..20013361, |20016015..20016362,20016430..20017352,20017731..20017907,20019816..20019943, |20020456..20020640,20020750..20020931,20021026..20021233,20023796..20025069, |20025448..20025624,20027515..20027642,20028155..20028339,20028449..20028630, |20028713..20028920,20031574..20031921,20031989..20032911,20033290..20033466, |20035375..20035502,20036015..20036199,20036309..20036490,20036573..20036780) } EVD { PRG|sim4tandem DB|na_gb.dmel CLA|so DT|20050823 DBX|AF070688 BLOC|complement(20007894..20008546,20008614..20009536,20009920..20010096, |20011952..20012079,20012148..20012286) } EVD { PRG|blastx_masked DB|aa_SPTR.insect CLA|protein DT|20041008 DBX|Q7PFZ8 BLOC|complement(20009307..20009537,20009924..20010097) } EVD { PRG|prosplign DB|aa_ncbi_dmel CLA|protein DT|20060123 DBX|AAV36986 BLOC|complement(20008274..20008546,20008614..20009536,20009920..20010096, |20011952..20012081,20012323..20012340) DBX|AAX33607 BLOC|complement(20008274..20008303,20008334..20009536,20009920..20010096, |20011952..20012079,20012148..20012197) } EVD { PRG|blastx_masked DB|aa_SPTR.rodent CLA|protein DT|20041008 DBX|O88487 BLOC|complement(20008280..20008450,20008447..20008521,20008614..20009540) DBX|Q62871 BLOC|complement(20008280..20008450,20008447..20008521,20008520..20008549, |20008614..20009540) DBX|BAC40097 BLOC|complement(20008280..20008450,20008447..20008521,20008614..20009540) } EVD { PRG|augustus DB|dummy CLA|augustus DT|20050713 BLOC|complement(20008271..20008546,20008614..20009536,20009920..20010096, |20011952..20012033,20012886..20013067,20013154..20013399,20015342..20015372) } EVD { PRG|blastx_masked DB|aa_SPTR.othvert CLA|protein DT|20041008 DBX|Q90WF8 BLOC|complement(20008620..20009492) DBX|Q98SV2 BLOC|complement(20008280..20008450,20008614..20009540) } EVD { PRG|tblastxwrap_masked DB|na_baylorf1_scfchunk.dpse CLA|so DT|20041008 DBX|Contig2105_Contig7229-3 BLOC|complement(20008274..20008408) DBX|Contig2105_Contig7229-3 BLOC|complement(20008611..20009555) DBX|Contig2105_Contig7229-3 BLOC|complement(20009915..20010100) DBX|Contig2105_Contig7229-3 BLOC|complement(20009989..20010159) DBX|Contig2105_Contig7229-3 BLOC|complement(20011430..20011579) DBX|Contig2105_Contig7229-3 BLOC|complement(20011944..20012084) } EVD { PRG|blastx_masked DB|aa_SPTR.dmel CLA|protein DT|20041008 DBX|Q8MSA9 BLOC|complement(20008274..20008450,20008447..20008494,20008496..20008648, |20008614..20009144) DBX|Q8IRZ4 BLOC|complement(20008274..20008648,20008614..20009507) DBX|Q24246 BLOC|complement(20008274..20008450,20008447..20008494,20008496..20008648, |20008614..20009537,20009921..20010073,20011502..20011564,20011998..20012081) DBX|Q9W5W4 BLOC|complement(20008274..20008648,20008614..20009537,20009921..20010097, |20011998..20012081,20012150..20012197) DBX|O96509 BLOC|complement(20008274..20008648,20008614..20009537,20009921..20010097, |20011998..20012081,20012150..20012197) DBX|Q8IRZ3 BLOC|complement(20008274..20008450,20008447..20008494,20008496..20008540, |20008548..20009537,20009921..20010097,20011998..20012087,20012594..20012767, |20012886..20013065) } EVD { PRG|sim4 DB|na_dbEST.diff.dmel CLA|EST DBX|AT20333.5prime BLOC|complement(20009269..20009536,20009920..20010096,20011952..20012079, |20012148..20012291) DBX|AT06310.5prime BLOC|complement(20009473..20009536,20009920..20010096,20011952..20012063, |20012148..20012291) DBX|AT22538.5prime BLOC|complement(20009462..20009536,20009920..20010096,20011952..20012079, |20012148..20012293) DBX|AT08363.5prime BLOC|complement(20009269..20009536,20009920..20010096,20011952..20012079, |20012148..20012294) DBX|AT26489.5prime BLOC|complement(20009375..20009536,20009920..20010096,20011952..20012079, |20012148..20012294) DBX|AT06160.5prime BLOC|complement(20009439..20009536,20009920..20010096,20011952..20012079, |20012148..20012294) DBX|AT17034.5prime BLOC|complement(20009915..20010096,20011952..20012079,20012148..20012294) DBX|AT22512.5prime BLOC|complement(20009920..20010096,20011952..20012079,20012148..20012294) DBX|AT27879.5prime BLOC|complement(20012021..20012079,20012148..20012294) DBX|AT07563.5prime BLOC|complement(20009269..20009536,20009920..20010096,20011952..20012079, |20012148..20012298) DBX|AT28886.3prime BLOC|complement(20008002..20008546,20008614..20008660) DBX|AT29980.3prime BLOC|complement(20008002..20008546,20008614..20008743) DBX|bs67d10.y1 BLOC|complement(20008706..20008890) DBX|AT09851.5prime BLOC|complement(20008735..20009368) DBX|AT01927.5prime BLOC|complement(20008958..20009538) DBX|AT18086.5prime BLOC|complement(20008994..20009536,20009721..20009762) DBX|AT28968.5prime BLOC|complement(20009019..20009536,20009721..20009762) DBX|AT03643.5prime BLOC|complement(20008947..20009536,20009920..20010038) DBX|EK166908.5prime BLOC|complement(20009504..20009536,20009920..20010302) DBX|AT06118.5prime BLOC|complement(20009258..20009536,20009920..20010096,20011952..20012079, |20012148..20012239) DBX|AT03036.5prime BLOC|complement(20009342..20009536,20009920..20010096,20011952..20012079, |20012148..20012256) DBX|AT09304.5prime BLOC|complement(20009363..20009536,20009920..20010096,20011952..20012079, |20012148..20012300) DBX|AT05054.5prime BLOC|complement(20009487..20009536,20009920..20010096,20011952..20012079, |20012148..20012300) DBX|AT11629.5prime BLOC|complement(20009349..20009536,20009920..20010096,20011952..20012079, |20012148..20012301) DBX|AT28940.5prime BLOC|complement(20009407..20009536,20009920..20010096,20011952..20012069, |20012148..20012313) DBX|AT03059.5prime BLOC|complement(20009945..20010096,20011952..20012079,20012148..20012313) DBX|AT13950.5prime BLOC|complement(20009195..20009536,20009920..20010096,20011952..20012079, |20012148..20012320) DBX|AT22777.5prime BLOC|complement(20009473..20009536,20009920..20010096,20011952..20012079, |20012148..20012333) DBX|AT03212.5prime BLOC|complement(20009437..20009536,20009920..20010096,20011952..20012063, |20012148..20012259) DBX|AT21420.5prime BLOC|complement(20009318..20009536,20009920..20010096,20011952..20012079, |20012148..20012271) DBX|AT09105.5prime BLOC|complement(20009268..20009536,20009920..20010096,20011952..20012079, |20012148..20012272) DBX|AT13515.5prime BLOC|complement(20009360..20009536,20009920..20010096,20011952..20012079, |20012148..20012277) DBX|bs40c01.y1 BLOC|complement(20009461..20009536,20009920..20010096,20011952..20012079, |20012148..20012277) DBX|AT13552.5prime BLOC|complement(20009434..20009536,20009920..20010096,20011952..20012079, |20012148..20012281) DBX|AT18782.5prime BLOC|complement(20009325..20009536,20009920..20010096,20011952..20012079, |20012148..20012284) DBX|AT14321.5prime BLOC|complement(20009360..20009536,20009920..20010096,20011952..20012069, |20012148..20012284) DBX|AT14163.5prime BLOC|complement(20009281..20009536,20009920..20010096,20011952..20012079, |20012148..20012290) DBX|AT28150.5prime BLOC|complement(20009441..20009536,20009920..20010096,20011952..20012079, |20012148..20012290) } EVD { PRG|blastx_masked DB|aa_SPTR.plant CLA|protein DT|20041008 DBX|P27766 BLOC|complement(20008590..20009492) } EVD { PRG|blastx_masked DB|aa_SPTR.worm CLA|protein DT|20041008 DBX|O45087 BLOC|complement(20008614..20009555) } EVD { PRG|blastx_masked DB|aa_SPTR.primate CLA|protein DT|20041008 DBX|CAD97654 BLOC|complement(20008280..20008450,20008447..20008521,20008614..20009540) DBX|AAP35794 BLOC|complement(20008280..20008450,20008447..20008521,20008614..20009540) DBX|Q7Z4X1 BLOC|complement(20008280..20008450,20008447..20008521,20008614..20009540) } VERS|4.3 } # EOR GADR { RETE|ID 1 FBan0009579 GID 1 FBgn0000084 GSYM 1 AnnX CGSYM 1 CG9579 ARM 1 X CLOC 1 19C1-19C1 SCAF 1 AE002611 TRREC 1 AALEN 1 320 ID|FBan0009579 SYM|CG9579 GENSR { GSYM|AnnX ID|FBgn0000084 } ARM|X SCAF|AE002611 BLOC|complement(20005127..20007201) CLOCC|19C1-19C1 SQLEN|2075 GO|exocytosis ; GO:0006887 |negative regulation of coagulation ; GO:0050819 |phospholipid binding ; GO:0005543 |defense response ; GO:0006952 |actin binding ; GO:0003779 ID2|FBan0009579 SYN|Annx |anxX EST|RH55454 |RH44382 |RH39030 |RH11095 |RH11367 |RH38414 |RH16056 |RH34351 |RH42802 |RH36766 |RH42123 |RH34160 |RH36282 |RH14708 |RH63338 |RH04096 |RH67629 |RH57858 |RH02910 |RH37889 |bs53f02 |SD22531 |AT05291 |RH26665 |RH28859 |RE24994 |RH03123 |RH51948 |RH54236 |RH19754 |RH29941 |RH32673 |RH48118 |EN04909 |SD16319 |GM01104 |GM04135 |GM04193 |SD21133 |SD14153 |SD21838 |GM02882 |SD22739 |RH53117 |RE53407 |RH13096 |RH62608 |RH70302 |RH68438 |RH44629 |RH13128 |RE20313 |RH43545 |SD23881 |AT27991 |SD26655 |RH66553 |GH24186 |LD25605 |GH25604 |GH01392 |GH21626 |GH20923 |RH34171 |RH34135 |RH34108 |RH42372 |RH39370 |RH25242 |RH63929 |RH32179 |RH27258 |RH38622 |RH16193 |RH28017 |RH47504 |RH36508 |RH13237 |RH02558 |RH29114 |RH18837 |RH21666 |RH12265 |LP02671 |GH01335 |GH13104 |GH07463 |GH14532 |GH17562 |GH06730 |RH01287 |RH52520 |RH34063 |RH56947 |RH52904 |RH02612 |RH02489 |RH01672 |RH02953 |RH35928 |RH42977 |RE21351 |RH56352 |RH69417 |RH35605 |RH45739 |RH64580 |RH59884 |RH34375 CDNA|LD25605 AFFY|154336_at DT|20040816 TRREC { NAM|AnnX-RA SYN|FlyBase:FBtr0070025 |FlyBase Annotation IDs:CG9579-RA |FlyBase:FBpp0070024 |GB_protein:AAF45380.1 |FlyBase Annotation IDs:CG9579-PA |FlyBase:FBgn0081874 |FlyBase Annotation IDs:GA21889 |Dpse\GA21889 AANAM|AnnX-PA SQLEN|1249 (-) AALEN|320 BLOC|complement(20005127..20005330,20005723..20005904,20005987..20006698, |20007051..20007201) CDS|complement(20005277..20005330,20005723..20005904,20005987..20006698, |20007051..20007062) CMT|evidence=experimental |comment=Range of putative ortholog from tblastn was extended |to cover the gene prediction DT|20020704 } EVD { PRG|blastx_masked DB|aa_SPTR.othinv CLA|protein DT|20041008 DBX|Q7QG24 BLOC|complement(20005675..20005902,20006054..20006698) DBX|Q7QN98 BLOC|complement(20006054..20006698) DBX|Q7QFX5 BLOC|complement(20005687..20005899,20006054..20006701) } EVD { PRG|sim4 DB|na_gadfly.dros.RELEASE2 CLA|mRNA DT|20041008 DBX|CT17636.2 BLOC|complement(20005252..20005330,20005723..20005904,20005987..20006698, |20007051..20007190) } EVD { PRG|sim4 DB|na_ARGsCDS.dros CLA|mRNA DT|20041008 DBX|CDS-AnnX-RA BLOC|complement(20005277..20005330,20005723..20005904,20005987..20006698) } EVD { PRG|genie_masked DB|dummy CLA|genie_masked DT|20041008 BLOC|complement(20005274..20005330,20005723..20005904,20005987..20006698, |20007051..20007062) } EVD { PRG|dmel_r3_to_dmel_r4_migration DB|dmel_r3_affy_oligos CLA|oligonucleotide DT|20050125 DBX|154336_at_1124 BLOC|complement(20005206..20005230) DBX|154336_at_1090 BLOC|complement(20005240..20005264) DBX|154336_at_1055 BLOC|complement(20005275..20005299) DBX|154336_at_1034 BLOC|complement(20005296..20005320) DBX|154336_at_1030 BLOC|complement(20005300..20005324) DBX|154336_at_991 BLOC|complement(20005731..20005755) DBX|154336_at_945 BLOC|complement(20005777..20005801) DBX|154336_at_887 BLOC|complement(20005835..20005859) DBX|154336_at_874 BLOC|complement(20005848..20005872) DBX|154336_at_808 BLOC|complement(20005996..20006020) DBX|154336_at_770 BLOC|complement(20006034..20006058) DBX|154336_at_730 BLOC|complement(20006074..20006098) DBX|154336_at_697 BLOC|complement(20006107..20006131) DBX|154336_at_620 BLOC|complement(20006184..20006208) } EVD { PRG|tblastx_masked DB|na_dbEST.insect CLA|EST DBX|BX627108 BLOC|complement(20005988..20006698) DBX|BM607091 BLOC|complement(20006069..20006698) DBX|BM644990 BLOC|complement(20006018..20006707) } EVD { PRG|tblastxwrap_masked DB|na_scf_chunk_agambiae.fa CLA|DNA DT|20041008 DBX|AAAB01008844.1p10 BLOC|complement(20005720..20005908) DBX|AAAB01000648 BLOC|complement(20005720..20005908) DBX|AAAB01008844.1p1 BLOC|complement(20005717..20005917) DBX|AAAB01008844.1p1 BLOC|complement(20005717..20005917) DBX|AAAB01005119 BLOC|complement(20005717..20005917) DBX|AAAB01008844.1p1 BLOC|complement(20005720..20005917) DBX|AAAB01005119 BLOC|complement(20005720..20005917) DBX|AAAB01005119 BLOC|complement(20005988..20006146) DBX|AAAB01008844.1p1 BLOC|complement(20005988..20006209) DBX|AAAB01001998 BLOC|complement(20005988..20006209) DBX|AAAB01008844.1p1 BLOC|complement(20006213..20006521) DBX|AAAB01001998 BLOC|complement(20006213..20006521) DBX|AAAB01008844.1p1 BLOC|complement(20005988..20006704) DBX|AAAB01008844.1p1 BLOC|complement(20006522..20006704) DBX|AAAB01001998 BLOC|complement(20006522..20006704) DBX|AAAB01008844.1p10 BLOC|complement(20006225..20006713) } EVD { PRG|sim4 DB|na_dbEST.same.dmel CLA|EST DBX|RH55454.5prime BLOC|complement(20006207..20006698,20007051..20007196) DBX|RH44382.5prime BLOC|complement(20006215..20006698,20007051..20007196) DBX|RH39030.5prime BLOC|complement(20006220..20006698,20007051..20007196) DBX|RH11095.5prime BLOC|complement(20006220..20006698,20007051..20007196) DBX|RH11367.5prime BLOC|complement(20006239..20006698,20007051..20007196) DBX|RH38414.5prime BLOC|complement(20006263..20006698,20007051..20007196) DBX|RH16056.5prime BLOC|complement(20006264..20006698,20007051..20007196) DBX|RH34351.5prime BLOC|complement(20006265..20006698,20007051..20007196) DBX|RH42802.5prime BLOC|complement(20006265..20006698,20007051..20007196) DBX|RH36766.5prime BLOC|complement(20006267..20006698,20007051..20007196) DBX|RH42123.5prime BLOC|complement(20006267..20006698,20007051..20007196) DBX|RH34160.5prime BLOC|complement(20006270..20006698,20007051..20007196) DBX|RH36282.5prime BLOC|complement(20006270..20006698,20007051..20007196) DBX|RH14708.5prime BLOC|complement(20006271..20006698,20007051..20007196) DBX|RH63338.5prime BLOC|complement(20006272..20006698,20007051..20007196) DBX|RH04096.5prime BLOC|complement(20006272..20006698,20007051..20007196) DBX|RH67629.5prime BLOC|complement(20006272..20006698,20007051..20007196) DBX|RH57858.5prime BLOC|complement(20006272..20006698,20007051..20007196) DBX|RH02910.5prime BLOC|complement(20006272..20006698,20007051..20007196) DBX|RH37889.5prime BLOC|complement(20006272..20006698,20007051..20007196) DBX|RH26665.5prime BLOC|complement(20006272..20006698,20007051..20007196) DBX|RH28859.5prime BLOC|complement(20006272..20006698,20007051..20007196) DBX|RE24994.5prime BLOC|complement(20006272..20006698,20007051..20007196) DBX|RH03123.5prime BLOC|complement(20006272..20006698,20007051..20007196) DBX|RH51948.5prime BLOC|complement(20006272..20006698,20007051..20007196) DBX|RH54236.5prime BLOC|complement(20006272..20006698,20007051..20007196) DBX|RH19754.5prime BLOC|complement(20006273..20006698,20007051..20007196) DBX|RH29941.5prime BLOC|complement(20006274..20006698,20007051..20007196) DBX|RH32673.5prime BLOC|complement(20006275..20006698,20007051..20007196) DBX|RH48118.5prime BLOC|complement(20006278..20006698,20007051..20007196) DBX|RH53117.5prime BLOC|complement(20006279..20006698,20007051..20007196) DBX|RE53407.5prime BLOC|complement(20006279..20006698,20007051..20007196) DBX|RH13096.5prime BLOC|complement(20006281..20006698,20007051..20007196) DBX|RH62608.5prime BLOC|complement(20006285..20006698,20007051..20007196) DBX|RH70302.5prime BLOC|complement(20006293..20006698,20007051..20007196) DBX|RH68438.5prime BLOC|complement(20006296..20006698,20007051..20007196) DBX|RH44629.5prime BLOC|complement(20006306..20006698,20007051..20007196) DBX|RH13128.5prime BLOC|complement(20006309..20006698,20007051..20007196) DBX|RE20313.5prime BLOC|complement(20006317..20006698,20007051..20007196) DBX|RH43545.5prime BLOC|complement(20006325..20006698,20007051..20007196) DBX|RH66553.5prime BLOC|complement(20005201..20005330,20005723..20005904,20005987..20006233) DBX|GH24186.5prime BLOC|complement(20005252..20005330,20005723..20005904,20005987..20006280) DBX|LD25605:contig1 BLOC|complement(20005127..20005330,20005723..20005904,20005987..20006698, |20007051..20007169) DBX|GH25604.5prime BLOC|complement(20006268..20006698,20007051..20007170) DBX|GH01392.5prime BLOC|complement(20006265..20006698,20007051..20007172) DBX|GH21626.5prime BLOC|complement(20006265..20006698,20007051..20007172) DBX|GH20923.5prime BLOC|complement(20006287..20006698,20007051..20007172) DBX|RH34171.5prime BLOC|complement(20006325..20006698,20007051..20007196) DBX|RH34135.5prime BLOC|complement(20006325..20006698,20007051..20007196) DBX|RH34108.5prime BLOC|complement(20006325..20006698,20007051..20007196) DBX|RH42372.5prime BLOC|complement(20006328..20006698,20007051..20007196) DBX|RH39370.5prime BLOC|complement(20006335..20006698,20007051..20007196) DBX|RH25242.5prime BLOC|complement(20006335..20006698,20007051..20007196) DBX|RH63929.5prime BLOC|complement(20006335..20006698,20007051..20007196) DBX|RH32179.5prime BLOC|complement(20006336..20006698,20007051..20007196) DBX|RH27258.5prime BLOC|complement(20006363..20006698,20007051..20007196) DBX|RH38622.5prime BLOC|complement(20006366..20006698,20007051..20007196) DBX|RH16193.5prime BLOC|complement(20006372..20006698,20007051..20007196) DBX|RH28017.5prime BLOC|complement(20006388..20006698,20007051..20007196) DBX|RH47504.5prime BLOC|complement(20006404..20006698,20007051..20007196) DBX|RH36508.5prime BLOC|complement(20006486..20006698,20007051..20007196) DBX|RH13237.5prime BLOC|complement(20006489..20006698,20007051..20007196) DBX|RH02558.5prime BLOC|complement(20006546..20006698,20007051..20007196) DBX|RH29114.5prime BLOC|complement(20006552..20006698,20007051..20007196) DBX|RH18837.5prime BLOC|complement(20006573..20006698,20007051..20007196) DBX|RH21666.5prime BLOC|complement(20006599..20006698,20007051..20007196) DBX|RH12265.5prime BLOC|complement(20006612..20006698,20007051..20007196) DBX|LP02671.5prime BLOC|complement(20006264..20006698,20007051..20007174) DBX|GH01335.5prime BLOC|complement(20006265..20006698,20007051..20007174) DBX|GH13104.5prime BLOC|complement(20006265..20006698,20007051..20007174) DBX|GH07463.5prime BLOC|complement(20006279..20006698,20007051..20007177) DBX|GH14532.5prime BLOC|complement(20006266..20006698,20007051..20007179) DBX|GH17562.5prime BLOC|complement(20006304..20006698,20007051..20007180) DBX|GH06730.5prime BLOC|complement(20006194..20006698,20007051..20007190) DBX|RH01287:contig1 BLOC|complement(20006198..20006698,20007051..20007196) DBX|RH01287:contig2 BLOC|complement(20005127..20005330,20005719..20005904,20005987..20006151) DBX|RH52520.5prime BLOC|complement(20006296..20006698,20007051..20007197) DBX|RH34063.5prime BLOC|complement(20006169..20006698,20007051..20007196) DBX|RH56947.5prime BLOC|complement(20006307..20006698,20007051..20007197) DBX|RH52904.5prime BLOC|complement(20006182..20006698,20007051..20007196) DBX|RH02612.5prime BLOC|complement(20006185..20006698,20007051..20007201) DBX|RH02489.5prime BLOC|complement(20006221..20006698,20007051..20007201) DBX|RH01672.5prime BLOC|complement(20006336..20006698,20007051..20007201) DBX|RH02953.5prime BLOC|complement(20006494..20006698,20007051..20007201) DBX|RH35928.5prime BLOC|complement(20006182..20006698,20007051..20007196) DBX|RH42977.5prime BLOC|complement(20006185..20006698,20007051..20007196) DBX|RE21351.5prime BLOC|complement(20006189..20006698,20007051..20007196) DBX|RH56352.5prime BLOC|complement(20006193..20006698,20007051..20007196) DBX|RH69417.5prime BLOC|complement(20006195..20006698,20007051..20007196) DBX|RH35605.5prime BLOC|complement(20006197..20006698,20007051..20007196) DBX|RH45739.5prime BLOC|complement(20006198..20006698,20007051..20007196) DBX|RH64580.5prime BLOC|complement(20006198..20006698,20007051..20007196) DBX|RH59884.5prime BLOC|complement(20006201..20006698,20007051..20007196) DBX|RH34375.5prime BLOC|complement(20006201..20006698,20007051..20007196) } EVD { PRG|prosplign DB|aa_ncbi_other CLA|protein DT|20060123 DBX|CAI06088 BLOC|complement(20005289..20005330,20005723..20005904,20005987..20006710) DBX|CAI06089 BLOC|complement(20005336..20005377,20005723..20005904,20005987..20006710) DBX|NP_001002857 BLOC|complement(20005283..20005330,20005723..20005904,20005987..20006698, |20006769..20006837) DBX|NP_001003954 BLOC|complement(20005286..20005330,20005723..20005904,20005987..20006698, |20007047..20007157) } EVD { PRG|sim4 DB|na_transcript.dmel.RELEASE32 CLA|mRNA DT|20041008 DBX|CG9579-RA.32 BLOC|complement(20005127..20005330,20005723..20005904,20005987..20006698, |20007051..20007201) } EVD { PRG|sim4 DB|na_transcript.dmel.RELEASE31 CLA|mRNA DT|20041008 DBX|CG9579-RA.31 BLOC|complement(20005127..20005330,20005723..20005904,20005987..20006698, |20007051..20007201) } EVD { PRG|sim4tandem DB|na_gb.dmel CLA|cDNA DT|20050823 DBX|X78323 BLOC|complement(20004512..20006755,20006777..20007155) DBX|M34069 BLOC|complement(20005136..20005330,20005719..20005904,20005987..20006698, |20007051..20007155) DBX|LD25605 BLOC|complement(20005129..20005330,20005723..20005904,20005987..20006698, |20007051..20007169) } EVD { PRG|genscan_masked DB|dummy CLA|genscan_masked DT|20041008 BLOC|complement(20005410..20005613,20005723..20005904,20005987..20006698, |20007051..20007062) } EVD { PRG|blastx_masked DB|aa_SPTR.insect CLA|protein DT|20041008 DBX|Q7PFU3 BLOC|complement(20005726..20005902,20006054..20006698) DBX|Q7PS96 BLOC|complement(20005726..20005902,20006054..20006698) DBX|Q8WPG9 BLOC|complement(20005732..20005896,20006054..20006701) } EVD { PRG|blastx_masked DB|aa_SPTR.rodent CLA|protein DT|20041008 DBX|Q922A2 BLOC|complement(20005705..20005902,20006069..20006689) DBX|Q8VIN2 BLOC|complement(20005705..20005902,20006069..20006689) DBX|Q8CCV9 BLOC|complement(20006069..20006689) } EVD { PRG|augustus DB|dummy CLA|augustus DT|20050713 BLOC|complement(20005274..20005330,20005723..20005904,20005987..20006698, |20007051..20007062) } EVD { PRG|blastx_masked DB|aa_SPTR.othvert CLA|protein DT|20041008 DBX|Q92125 BLOC|complement(20005726..20005902,20006057..20006689) DBX|O93445 BLOC|complement(20005726..20005902,20006054..20006689) DBX|O93447 BLOC|complement(20005726..20005902,20006054..20006689) } EVD { PRG|tblastxwrap_masked DB|na_baylorf1_scfchunk.dpse CLA|so DT|20041008 DBX|Contig2105_Contig7229-3 BLOC|complement(20005717..20005905) DBX|Contig1193_Contig1472-5 BLOC|complement(20005717..20005908) DBX|Contig1867_Contig2136-1 BLOC|complement(20006225..20006425) DBX|Contig1193_Contig1472-5 BLOC|complement(20006225..20006692) DBX|Contig1867_Contig2136-1 BLOC|complement(20006324..20006701) DBX|Contig2105_Contig7229-3 BLOC|complement(20005985..20006704) } EVD { PRG|sim4 DB|na_dbEST.diff.dmel CLA|EST DBX|bs53f02.y1 BLOC|complement(20005128..20005330,20005723..20005904,20005987..20006069) DBX|SD22531.5prime BLOC|complement(20006070..20006688) DBX|AT05291.5prime BLOC|complement(20006010..20006690) DBX|EN04909.5prime BLOC|complement(20006381..20006698,20007051..20007157) DBX|SD16319.5prime BLOC|complement(20006097..20006698,20007051..20007160) DBX|GM01104.5prime BLOC|complement(20006359..20006698,20007051..20007164) DBX|GM04135.5prime BLOC|complement(20006208..20006698,20007051..20007171) DBX|GM04193.5prime BLOC|complement(20006275..20006698,20007051..20007171) DBX|SD21133.5prime BLOC|complement(20006197..20006698,20007051..20007172) DBX|SD14153.5prime BLOC|complement(20006209..20006698,20007051..20007172) DBX|SD21838.5prime BLOC|complement(20006278..20006698,20007051..20007172) DBX|GM02882.5prime BLOC|complement(20006411..20006698,20007051..20007172) DBX|SD22739.5prime BLOC|complement(20006126..20006698,20007051..20007174) DBX|SD23881.5prime BLOC|complement(20006148..20006698,20007051..20007174) DBX|AT27991.5prime BLOC|complement(20006157..20006698,20007051..20007174) DBX|SD26655.3prime BLOC|complement(20006256..20006698,20007051..20007192) } EVD { PRG|blastx_masked DB|aa_SPTR.dmel CLA|protein DT|20041008 DBX|Q8IRZ3 BLOC|complement(20005723..20005902) DBX|Q9VXG3 BLOC|complement(20005283..20005333,20005732..20005899,20006054..20006692) DBX|Q9VXG4 BLOC|complement(20005283..20005333,20005732..20005899,20006054..20006692) DBX|P22464 BLOC|complement(20005732..20005902,20006054..20006692) DBX|P22465 BLOC|complement(20005711..20005902,20006054..20006701) } EVD { PRG|blastx_masked DB|aa_SPTR.worm CLA|protein DT|20041008 DBX|Q27864 BLOC|complement(20005678..20005878,20006054..20006698) DBX|Q27512 BLOC|complement(20006057..20006701) DBX|CAE45742 BLOC|complement(20006057..20006701) } EVD { PRG|blastx_masked DB|aa_SPTR.plant CLA|protein DT|20041008 DBX|Q9SYT0 BLOC|complement(20005283..20005327,20005726..20005902,20006066..20006686) DBX|Q96527 BLOC|complement(20005283..20005327,20005726..20005902,20006066..20006686) DBX|Q39001 BLOC|complement(20006066..20006686) } EVD { PRG|blastx_masked DB|aa_SPTR.primate CLA|protein DT|20041008 DBX|AAP35851 BLOC|complement(20005693..20005902,20006069..20006689) DBX|P20073 BLOC|complement(20005693..20005902,20006069..20006689) DBX|BAB93492 BLOC|complement(20005693..20005902,20006069..20006689) } EVD { PRG|sim4 DB|na_ARGs.dros CLA|mRNA DT|20041008 DBX|AnnX-RA BLOC|complement(20005127..20005330,20005723..20005904,20005987..20006698, |20007051..20007169) } VERS|4.3 } # EOR GADR { RETE|ID 1 FBan0017947 GID 1 FBgn0010215 GSYM 1 alpha-Cat CGSYM 1 CG17947 ARM 1 3L CLOC 1 80F1-80F2 SCAF 1 AE002656 TRREC 1 AALEN 1 917 ID|FBan0017947 SYM|CG17947 GENSR { GSYM|alpha-Cat ID|FBgn0010215 } ARM|3L SCAF|AE002656 BLOC|complement(23252515..23271946) CLOCC|80F1-80F2 SQLEN|19432 GO|establishment and/or maintenance of cell polarity ; GO:0007163 |cell-matrix junction ; GO:0030055 |actin cytoskeleton ; GO:0015629 |phosphoenolpyruvate-protein phosphotransferase activity ; GO:0008965 |phosphoenolpyruvate-dependent sugar phosphotransferase system ; GO:0009401 |oocyte localization during oogenesis ; GO:0030720 |cadherin binding ; GO:0045296 |actin binding ; GO:0003779 |structural constituent of cytoskeleton ; GO:0005200 |cytoskeletal anchoring ; GO:0007016 |sugar porter activity ; GO:0005351 |cell motility ; GO:0006928 |zonula adherens ; GO:0005915 |catenin complex ; GO:0016342 |cell adhesion ; GO:0007155 |adherens junction ; GO:0005912 |spot adherens junction ; GO:0005914 |cytoplasm ; GO:0005737 |cytoskeletal protein binding ; GO:0008092 ID2|FBan0017947 SYN|alpha-Catenin |catenin |D&agr;C |D-&agr;-catenin |&agr;cat |alpha-catenin |D&agr;-catenin |Dmcatp |D&agr;-cadherin |D&agr;Catenin |&agr;-CAT |&agr;-ctn |CT39986 |D&agr;-Catenin EST|RE63810 |RE69542 |RE73726 |RE09202 |LD30423 |RE68455 |RE70623 |RE26443 |RE52570 |RE45029 |RE54850 |RE02278 |RE41422 |RE21283 |RE18795 |RE65230 |RE35081 |RE44938 |RE29593 |RE15315 |EK156323 |EK104459 |SD25088 |SD20749 |EK261937 |RE75160 |RE73036 |RE24160 |RE43792 |RE24962 |RE72522 |RE11447 |RE65270 |RE24492 |RE38955 |EN06009 |EK255710 |EK279356 |EK263160 |EK159003 |EK210046 |EN16342 |EK148719 |EK226034 |EK147135 |RE04336 |RE51783 |RE50681 |RE48781 |RE08048 |RE44478 |EK104520 |EK150052 |EK053206 |EK184434 |SD06388 |GM02796 |LP02592 |GH22876 |LD18254 |LD19561 |LD07464 |LD18130 |RE01171 |LD27559 |LD33292 |LD14569 |LP08869 |LD20701 |RE11157 |LD20893 |LD07667 |LD15926 |RE34591 |LD14106 |RE39228 |LD05188 |LD04577 |RE66536 |RE11106 |RE15988 CDNA|LD30423 DT|20040809 TRREC { NAM|alpha-Cat-RA SYN|FlyBase:FBtr0070038 |FlyBase Annotation IDs:CG17947-RA |FlyBase:FBpp0070037 |FlyBase Annotation IDs:CG17947-PA |GB_protein:AAF45466.1 AANAM|alpha-Cat-PA SQLEN|2977 (-) AALEN|917 BLOC|complement(23252515..23252843,23252902..23253018,23253075..23253315, |23259483..23259664,23259730..23259797,23260529..23260601,23261335..23261486, |23262555..23263239,23263727..23263930,23264539..23264856,23268205..23268581, |23271716..23271946) CDS|complement(23252682..23252843,23252902..23253018,23253075..23253315, |23259483..23259664,23259730..23259797,23260529..23260601,23261335..23261486, |23262555..23263239,23263727..23263930,23264539..23264856,23268205..23268581, |23271716..23271887) CMT|comment=Transposon inserted in intron |protein_id=AAF45466 |validation_flag=transposon in gene DT|20040625 } EVD { PRG|sim4 DB|na_transcript.dmel.RELEASE31 CLA|mRNA DT|20041008 DBX|CG17947-RA.31 BLOC|complement(23252515..23252843,23252902..23253018,23253075..23253315, |23259483..23259664,23259730..23259797,23260529..23260601,23261335..23261486, |23262555..23263239,23263727..23263930,23264539..23264856,23268205..23268581, |23271716..23271946) } EVD { PRG|blastx_masked DB|aa_SPTR.othinv CLA|protein DT|20041008 DBX|Q25430 BLOC|complement(23252700..23252843,23252923..23253018,23253072..23253317, |23259482..23259658,23260485..23260604,23261335..23261487,23262538..23263230, |23263730..23263936,23264539..23264856,23268205..23268582,23271741..23271848) DBX|Q7QDI9 BLOC|complement(23252682..23252843,23252881..23253018,23253072..23253317, |23259482..23259667,23261260..23261487,23262523..23263239,23263724..23263930, |23264539..23264856,23268205..23268582,23271741..23271878) } EVD { PRG|genscan_masked DB|dummy CLA|genscan_masked DT|20041008 BLOC|complement(23249298..23249747,23252902..23253018,23253075..23253315, |23259483..23259664,23259730..23259797,23260529..23260601,23261335..23261486, |23262555..23263239,23263727..23263930,23264539..23264856,23268205..23268581, |23271716..23271869) } EVD { PRG|sim4tandem DB|na_gb.dmel CLA|cDNA DT|20050823 DBX|D13964 BLOC|complement(23252515..23252843,23252902..23253018,23253075..23253315, |23259483..23259664,23259730..23259797,23260529..23260601,23261335..23261486, |23262555..23263239,23263727..23263930,23264539..23264856,23268205..23268581, |23271716..23271904) DBX|LD30423 BLOC|complement(23252484..23252843,23252902..23253018,23253075..23253315, |23259483..23259664,23259730..23259797,23260529..23260601,23261335..23261486, |23262555..23263239,23263727..23263930,23264539..23264856,23268205..23268581, |23271716..23271921) } EVD { PRG|sim4 DB|na_gadfly.dros.RELEASE2 CLA|mRNA DT|20041008 DBX|CT39986.2 BLOC|complement(23252515..23252843,23252902..23253018,23253075..23253315, |23259483..23259664,23259730..23259797,23260529..23260601,23261335..23261486, |23262555..23263239,23263727..23263930,23264539..23264856,23268205..23268581, |23271716..23271908,23273396..23273410) } EVD { PRG|blastx_masked DB|aa_SPTR.insect CLA|protein DT|20041008 DBX|O46217 BLOC|complement(23262934..23263239,23263724..23263915) } EVD { PRG|blastx_masked DB|aa_SPTR.rodent CLA|protein DT|20041008 DBX|BAB23418 BLOC|complement(23252697..23252840,23252893..23253018,23253048..23253317, |23259482..23259658,23261335..23261487,23262550..23263233,23263727..23263951, |23264539..23264820,23268220..23268582,23271741..23271863) DBX|P26231 BLOC|complement(23252697..23252840,23252893..23253018,23253048..23253317, |23259482..23259658,23261335..23261487,23262550..23263233,23263727..23263951, |23264539..23264820,23268220..23268582,23271741..23271863) DBX|AAH48163 BLOC|complement(23252697..23252840,23252893..23253018,23253048..23253317, |23259482..23259658,23261335..23261487,23262550..23263233,23263727..23263951, |23264539..23264820,23268220..23268582,23271741..23271863) } EVD { PRG|repeatmasker DB|dummy CLA|RepeatMasker:dummy DT|20041008 DBX|U66884 BLOC|complement(23254452..23254580) DBX|U66884 BLOC|complement(23258458..23258549) DBX|U66884 BLOC|complement(23258913..23258980) DBX|U66884 BLOC|complement(23259945..23260083) DBX|U66884 BLOC|complement(23260175..23260244) DBX|U66884 BLOC|complement(23263261..23263367) DBX|U66884 BLOC|complement(23263401..23263560) DBX|U66884 BLOC|complement(23263618..23263668) DBX|U66884 BLOC|complement(23265344..23265469) DBX|nnnnnnnn BLOC|complement(23265505..23266289) DBX|nnnnnnnn BLOC|complement(23266828..23267658) DBX|U66884 BLOC|complement(23267681..23267961) DBX|U66884 BLOC|complement(23267962..23268003) DBX|Z29098 BLOC|complement(23268797..23268874) DBX|U66884 BLOC|complement(23269367..23269441) DBX|U66884 BLOC|complement(23269480..23269675) DBX|AC005453 BLOC|complement(23269699..23269941) DBX|AC005453 BLOC|complement(23270137..23270351) DBX|U66884 BLOC|complement(23270561..23270662) DBX|U66884 BLOC|complement(23271077..23271199) DBX|U66884 BLOC|complement(23271236..23271349) } EVD { PRG|tblastxwrap_masked DB|na_baylorf1_scfchunk.dpse CLA|so DT|20041008 DBX|Contig3286_Contig7811B.fa-1 BLOC|complement(23252682..23252843) DBX|Contig3286_Contig7811B.fa-1 BLOC|complement(23252893..23253018) DBX|Contig3286_Contig7811B.fa-1 BLOC|complement(23253072..23253323) DBX|Contig3286_Contig7811B.fa-1 BLOC|complement(23259482..23259718) DBX|Contig3286_Contig7811B.fa-1 BLOC|complement(23259724..23259807) DBX|Contig3286_Contig7811B.fa-1 BLOC|complement(23260524..23260601) DBX|Contig3286_Contig7811B.fa-1 BLOC|complement(23268208..23268582) DBX|Contig3286_Contig7811B.fa-1 BLOC|complement(23271711..23271872) } EVD { PRG|blastx_masked DB|aa_SPTR.othvert CLA|protein DT|20041008 DBX|P30997 BLOC|complement(23252697..23252843,23252896..23253018,23253072..23253317, |23259482..23259658,23261335..23261487,23262550..23263233,23263727..23263924, |23264539..23264901,23268205..23268582,23271741..23271842) DBX|Q91682 BLOC|complement(23252697..23252840,23252893..23253018,23253048..23253317, |23259482..23259658,23261335..23261487,23262550..23263233,23263727..23263924, |23264539..23264817,23268220..23268582,23271741..23271848) DBX|Q9PVF8 BLOC|complement(23252697..23252840,23252917..23253018,23253048..23253317, |23259482..23259658,23261335..23261487,23262550..23263233,23263727..23263951, |23264539..23264835,23268220..23268582,23271741..23271863) } EVD { PRG|sim4 DB|na_dbEST.diff.dmel CLA|EST DBX|EK156323.5prime BLOC|complement(23252532..23252843) DBX|EK104459.5prime BLOC|complement(23252917..23253018,23253075..23253251) DBX|SD25088.5prime BLOC|complement(23253657..23254198) DBX|SD20749.5prime BLOC|complement(23253693..23254198) DBX|EK261937.5prime BLOC|complement(23255928..23256290) DBX|EN06009.5prime BLOC|complement(23252973..23253018,23253075..23253315,23259483..23259654) DBX|EK255710.5prime BLOC|complement(23260546..23260601,23261335..23261486,23262555..23262792) DBX|EK279356.5prime BLOC|complement(23263329..23263726) DBX|EK263160.5prime BLOC|complement(23262866..23263239,23263727..23263771) DBX|EK159003.5prime BLOC|complement(23262798..23263239,23263727..23263794) DBX|EK210046.5prime BLOC|complement(23262913..23263239,23263727..23263794) DBX|EN16342.5prime BLOC|complement(23262877..23263239,23263727..23263930,23264539..23264554) DBX|EK148719.5prime BLOC|complement(23263875..23263930,23264539..23264690) DBX|EK226034.5prime BLOC|complement(23263722..23263930,23264539..23264814) DBX|EK147135.5prime BLOC|complement(23264592..23264827) DBX|EK104520.5prime BLOC|complement(23263754..23263930,23264539..23264861) DBX|EK150052.5prime BLOC|complement(23263804..23263930,23264539..23264861) DBX|EK053206.5prime BLOC|complement(23263823..23263930,23264539..23264861) DBX|EK184434.5prime BLOC|complement(23268283..23268581,23271716..23271853) DBX|SD06388.5prime BLOC|complement(23264839..23264856,23268205..23268581,23271716..23271884) DBX|GM02796.5prime BLOC|complement(23264835..23264856,23268205..23268581,23271716..23271890) } EVD { PRG|blastx_masked DB|aa_SPTR.dmel CLA|protein DT|20041008 DBX|O46037 BLOC|complement(23262565..23263224) DBX|Q8MLQ4 BLOC|complement(23252923..23253000,23253123..23253317) DBX|P35220 BLOC|complement(23252682..23252843,23252881..23253018,23253072..23253317, |23259482..23259667,23261260..23261487,23262541..23263239,23263721..23263930, |23264539..23264856,23268205..23268582,23271741..23271887) DBX|Q24584 BLOC|complement(23262565..23263224) DBX|Q7PLR4 BLOC|complement(23254101..23254271) DBX|Q9U523 BLOC|complement(23253165..23253317) DBX|Q9W1F1 BLOC|complement(23252923..23253000,23253123..23253317) } EVD { PRG|tblastx_masked DB|na_dbEST.insect CLA|EST DBX|BM592204 BLOC|complement(23252679..23252843,23252881..23253018,23253072..23253317) DBX|BX467162 BLOC|complement(23252694..23252837,23252902..23253018,23253072..23253323, |23259482..23259667) DBX|BX768200 BLOC|complement(23259503..23259667,23259730..23259798,23260530..23260604, |23261335..23261487,23262523..23262843) DBX|CK550850 BLOC|complement(23262760..23263233) DBX|AJ280676 BLOC|complement(23262943..23263239,23263724..23263834) DBX|AJ280709 BLOC|complement(23268205..23268582) } EVD { PRG|blastx_masked DB|aa_SPTR.worm CLA|protein DT|20041008 DBX|P90947 BLOC|complement(23252703..23252834,23252893..23253018,23253045..23253317, |23259482..23259667,23261335..23261454,23262556..23263233,23263736..23263939, |23264533..23264835,23268214..23268609) } EVD { PRG|tblastxwrap_masked DB|na_scf_chunk_agambiae.fa CLA|DNA DT|20041008 DBX|AAAB01008851.1p11 BLOC|complement(23252682..23252843) DBX|AAAB01008851.1p11 BLOC|complement(23252890..23253018) DBX|AAAB01008851.1p11 BLOC|complement(23253060..23253314) DBX|AAAB01008851.1p11 BLOC|complement(23259482..23259664) DBX|AAAB01008851.1p11 BLOC|complement(23260524..23260604) DBX|AAAB01008851.1p11 BLOC|complement(23261323..23261487) DBX|AAAB01008851.1p11 BLOC|complement(23262550..23263239) DBX|AAAB01008851.1p11 BLOC|complement(23263721..23263930) DBX|AAAB01008851.1p11 BLOC|complement(23264539..23264856) DBX|AAAB01008851.1p11 BLOC|complement(23268205..23268582) DBX|AAAB01008851.1p11 BLOC|complement(23271711..23271878) } EVD { PRG|blastx_masked DB|aa_SPTR.primate CLA|protein DT|20041008 DBX|P35221 BLOC|complement(23252697..23252840,23252893..23253018,23253048..23253317, |23259482..23259658,23261335..23261487,23262550..23263233,23263727..23263951, |23264539..23264820,23268220..23268582,23271741..23271863) DBX|P26232 BLOC|complement(23252697..23252843,23252896..23253018,23253066..23253317, |23259482..23259658,23261335..23261487,23262550..23263233,23263727..23263924, |23264539..23264901,23268205..23268582,23271741..23271842) DBX|Q7Z3Y0 BLOC|complement(23252697..23252843,23252896..23253018,23253072..23253317, |23259482..23259658,23261335..23261487,23262550..23263233,23263727..23263924, |23264539..23264901,23268205..23268582,23271741..23271842) } EVD { PRG|promoter DB|dummy CLA|promoter DT|20041008 BLOC|complement(23269944..23269945) BLOC|complement(23262011..23262012) } EVD { PRG|sim4 DB|na_dbEST.same.dmel CLA|EST DBX|RE63810.5prime BLOC|complement(23264840..23264856,23268205..23268581,23271716..23271918) DBX|RE69542.5prime BLOC|complement(23264840..23264856,23268205..23268581,23271716..23271918) DBX|RE73726.5prime BLOC|complement(23268198..23268581,23271716..23271918) DBX|RE09202.5prime BLOC|complement(23268218..23268581,23271716..23271918) DBX|LD30423:contig1 BLOC|complement(23268205..23268581,23271716..23271921) DBX|LD30423:contig2 BLOC|complement(23252487..23252843,23252902..23253018,23253075..23253178) DBX|RE68455.5prime BLOC|complement(23264747..23264856,23268205..23268581,23271716..23271921) DBX|RE70623.5prime BLOC|complement(23264750..23264856,23268205..23268581,23271716..23271921) DBX|RE26443.5prime BLOC|complement(23264763..23264856,23268205..23268581,23271716..23271921) DBX|RE52570.5prime BLOC|complement(23264784..23264856,23268205..23268581,23271716..23271921) DBX|RE45029.5prime BLOC|complement(23264792..23264856,23268205..23268581,23271716..23271921) DBX|RE54850.5prime BLOC|complement(23264798..23264856,23268205..23268581,23271716..23271921) DBX|RE02278.5prime BLOC|complement(23264817..23264856,23268205..23268581,23271716..23271921) DBX|RE41422.5prime BLOC|complement(23264837..23264856,23268205..23268581,23271716..23271921) DBX|RE21283.5prime BLOC|complement(23264778..23264856,23268205..23268581,23271716..23271923) DBX|RE18795.5prime BLOC|complement(23264803..23264856,23268205..23268581,23271716..23271923) DBX|RE65230.5prime BLOC|complement(23268352..23268581,23271716..23271923) DBX|RE35081.5prime BLOC|complement(23264838..23264856,23268205..23268581,23271716..23271932) DBX|RE44938.5prime BLOC|complement(23264777..23264856,23268205..23268581,23271716..23271933) DBX|RE29593.5prime BLOC|complement(23264798..23264856,23268205..23268581,23271716..23271933) DBX|RE15315.5prime BLOC|complement(23264801..23264856,23268205..23268581,23271716..23271933) DBX|RE75160.5prime BLOC|complement(23264840..23264856,23268205..23268581,23271716..23271933) DBX|RE73036.5prime BLOC|complement(23268204..23268581,23271716..23271933) DBX|RE24160.5prime BLOC|complement(23268205..23268581,23271716..23271933) DBX|RE43792.5prime BLOC|complement(23268208..23268581,23271716..23271933) DBX|RE24962.5prime BLOC|complement(23268347..23268581,23271716..23271933) DBX|RE72522.5prime BLOC|complement(23268465..23268581,23271716..23271933) DBX|RE11447.5prime BLOC|complement(23271742..23271933) DBX|RE65270.5prime BLOC|complement(23268250..23268581,23271716..23271937) DBX|RE24492.5prime BLOC|complement(23268275..23268581,23271716..23271937) DBX|RE38955.5prime BLOC|complement(23268335..23268581,23271716..23271937) DBX|RE04336.5prime BLOC|complement(23268531..23268581,23271716..23271940) DBX|RE51783.5prime BLOC|complement(23264781..23264856,23268205..23268581,23271716..23271946) DBX|RE50681.5prime BLOC|complement(23264806..23264856,23268205..23268581,23271716..23271946) DBX|RE48781.5prime BLOC|complement(23268244..23268581,23271716..23271946) DBX|RE08048.5prime BLOC|complement(23268267..23268581,23271716..23271946) DBX|RE44478.5prime BLOC|complement(23268420..23268581,23271716..23271946) DBX|LP02592.3prime BLOC|complement(23252493..23252843,23252902..23253018,23253075..23253140) DBX|GH22876.5prime BLOC|complement(23261454..23261486,23262555..23263082) DBX|LD18254.5prime BLOC|complement(23264604..23264856,23268205..23268452) DBX|LD19561.5prime BLOC|complement(23268207..23268581,23271716..23271864) DBX|LD07464.5prime BLOC|complement(23268234..23268581,23271716..23271892) DBX|LD18130.5prime BLOC|complement(23268292..23268581,23271716..23271892) DBX|RE01171:contig2 BLOC|complement(23252505..23252843,23252902..23253018,23253075..23253107) DBX|RE01171:contig1 BLOC|complement(23264782..23264856,23268205..23268581,23271716..23271896) DBX|LD27559.5prime BLOC|complement(23268206..23268581,23271716..23271899) DBX|LD33292.5prime BLOC|complement(23268205..23268581,23271716..23271902) DBX|LD14569.5prime BLOC|complement(23268205..23268581,23271716..23271902) DBX|LP08869.5prime BLOC|complement(23268205..23268581,23271716..23271902) DBX|LD20701.5prime BLOC|complement(23268250..23268581,23271716..23271902) DBX|RE11157.5prime BLOC|complement(23264715..23264856,23268205..23268581,23271716..23271903) DBX|LD20893.5prime BLOC|complement(23268207..23268581,23271716..23271907) DBX|LD07667.5prime BLOC|complement(23264653..23264856,23268205..23268581,23271716..23271913) DBX|LD15926.5prime BLOC|complement(23264697..23264856,23268205..23268581,23271716..23271914) DBX|RE34591.5prime BLOC|complement(23264744..23264856,23268205..23268581,23271716..23271914) DBX|LD14106.5prime BLOC|complement(23264832..23264856,23268205..23268581,23271716..23271914) DBX|RE39228.5prime BLOC|complement(23268205..23268581,23271716..23271914) DBX|LD05188.5prime BLOC|complement(23268361..23268581,23271716..23271914) DBX|LD04577.5prime BLOC|complement(23268361..23268581,23271716..23271914) DBX|RE66536.5prime BLOC|complement(23264703..23264856,23268205..23268581,23271716..23271915) DBX|RE11106.5prime BLOC|complement(23264791..23264856,23268205..23268581,23271716..23271918) DBX|RE15988.5prime BLOC|complement(23264839..23264856,23268205..23268581,23271716..23271918) } EVD { PRG|sim4 DB|na_transcript.dmel.RELEASE32 CLA|mRNA DT|20041008 DBX|CG17947-Cat-RA.32 BLOC|complement(23252515..23252843,23252902..23253018,23253075..23253315, |23259483..23259664,23259730..23259797,23260529..23260601,23261335..23261486, |23262555..23263239,23263727..23263930,23264539..23264856,23268205..23268581, |23271716..23271946) } VERS|4.3 } # EOR GADR { RETE|ID 1 FBan0032230 GID 1 FBgn0052230 GSYM 1 CG32230 CGSYM 1 CG32230 ARM 1 3L CLOC 1 80F2-80F2 SCAF 1 AE002656 TRREC 2 AALEN 2 83 ID|FBan0032230 SYM|CG32230 GENSR { GSYM|CG32230 ID|FBgn0052230 } ARM|3L SCAF|AE002656 BLOC|23273167..23275447 CLOCC|80F2-80F2 SQLEN|2281 GO|respiratory chain complex I (sensu Eukaryota) ; GO:0005747 |mitochondrial electron transport, NADH to ubiquinone ; GO:0006120 |NADH dehydrogenase activity ; GO:0003954 ID2|FBan0032230 |FBgn0043838 |FBgn0047088 SYN|BEST:GH04411 |BcDNA:RE56733 EST|EK231743 |EP03156 |EK267728 |RE56733 |EK221502 |RH64169 |EK294420 |RH73031 |GM01687 |RH14311 |EC31564 |RH53743 |EK181246 |EK181313 |EC01943 CDNA|RE56733 DT|20040809 TRREC { NAM|CG32230-RA SYN|FlyBase:FBtr0070040 |FlyBase:FBpp0070039 |GB_protein:AAN11411.1 AANAM|CG32230-PA SQLEN|448 AALEN|83 BLOC|join(23273167..23273317,23273375..23273521,23275298..23275447) CDS|join(23273276..23273317,23273375..23273521,23275298..23275357) CMT|status=not done DT|20040625 } TRREC { NAM|CG32230-RB SYN|FlyBase:FBtr0070041 |FlyBase:FBpp0070040 |GB_protein:AAN11412.1 |FlyBase:FBgn0076785 |FlyBase Annotation IDs:GA16771 |Dpse\GA16771 AANAM|CG32230-PB SQLEN|388 AALEN|83 BLOC|join(23273167..23273210,23273271..23273317,23273375..23273521, |23275298..23275447) CDS|join(23273276..23273317,23273375..23273521,23275298..23275357) CMT|comment=Range of putative ortholog from tblastn was extended |to cover the gene prediction DT|20040625 } EVD { PRG|blastx_masked DB|aa_SPTR.othinv CLA|protein DT|20041008 DBX|Q7PD20 BLOC|join(23273273..23273320,23273375..23273551) } EVD { PRG|repeatmasker DB|dummy CLA|RepeatMasker:dummy DT|20041008 DBX|U66884 BLOC|23273757..23274056 DBX|U66884 BLOC|23274070..23274162 } EVD { PRG|tblastx_masked DB|na_dbEST.insect CLA|EST DBX|BM620422 BLOC|join(23273273..23273320,23273375..23273551) DBX|BM657668 BLOC|join(23273273..23273320,23273375..23273551) DBX|CK536934 BLOC|23273360..23273551 } EVD { PRG|tblastxwrap_masked DB|na_scf_chunk_agambiae.fa CLA|DNA DT|20041008 DBX|AAAB01008904.1p7 BLOC|23273366..23273524 DBX|AAAB01008982.1p11 BLOC|23273366..23273524 } EVD { PRG|sim4 DB|na_dbEST.same.dmel CLA|EST DBX|RE56733.5prime BLOC|join(23273168..23273317,23273375..23273521,23275298..23275441) DBX|RH64169.5prime BLOC|join(23273271..23273317,23273375..23273521,23275298..23275445) DBX|RH73031.5prime BLOC|join(23273271..23273317,23273375..23273521,23275298..23275445) DBX|RH14311.5prime BLOC|join(23273271..23273317,23273375..23273521,23275298..23275446) DBX|RH53743.5prime BLOC|join(23273271..23273317,23273375..23273521,23275298..23275446) } EVD { PRG|prosplign DB|aa_ncbi_other CLA|protein DT|20060123 DBX|AAY63985 BLOC|join(23273276..23273317,23273375..23273521) } EVD { PRG|sim4 DB|na_transcript.dmel.RELEASE32 CLA|mRNA DT|20041008 DBX|CG32230-RA.32 BLOC|join(23273166..23273317,23273375..23273521,23275298..23275441) DBX|CG32230-RB.32 BLOC|join(23273171..23273210,23273271..23273317,23273375..23273521, |23275298..23275447) } EVD { PRG|sim4 DB|na_transcript.dmel.RELEASE31 CLA|mRNA DT|20041008 DBX|CG32230-RB.31 BLOC|join(23273171..23273210,23273271..23273317,23273375..23273521, |23275298..23275447) DBX|CG32230-RA.31 BLOC|join(23273166..23273317,23273375..23273521,23275298..23275441) } EVD { PRG|sim4tandem DB|na_gb.dmel CLA|cDNA DT|20050823 DBX|RE56733 BLOC|join(23273168..23273317,23273375..23273521,23275298..23275441) } EVD { PRG|blastx_masked DB|aa_SPTR.rodent CLA|protein DT|20041008 DBX|Q62425 BLOC|23273360..23273521 DBX|BAC36137 BLOC|23273360..23273521 } EVD { PRG|repeat_runner_seg DB|dummy CLA|repeat_runner_seg DT|20041008 BLOC|23273716..23274172 } EVD { PRG|blastx_masked DB|aa_SPTR.othvert CLA|protein DT|20041008 DBX|Q01321 BLOC|23273375..23273521 } EVD { PRG|tblastxwrap_masked DB|na_baylorf1_scfchunk.dpse CLA|so DT|20041008 DBX|Contig4971_Contig7717B.fa-1 BLOC|23273375..23273524 } EVD { PRG|sim4 DB|na_dbEST.diff.dmel CLA|EST DBX|EK231743.5prime BLOC|23273522..23273994 DBX|EP03156.3prime BLOC|23273795..23274237 DBX|EK267728.5prime BLOC|join(23273126..23273210,23273271..23273317,23273375..23273521, |23275298..23275342) DBX|EK221502.5prime BLOC|join(23273167..23273210,23273271..23273317,23273375..23273469) DBX|EK294420.5prime BLOC|join(23273168..23273210,23273271..23273317,23273375..23273521, |23275298..23275533) DBX|GM01687:contig1 BLOC|join(23273171..23273210,23273271..23273317,23273375..23273521, |23275298..23275445) DBX|EC31564.5prime BLOC|join(23273261..23273317,23273375..23273521,23275298..23275443) DBX|EK181246.5prime BLOC|join(23273271..23273317,23273375..23273521,23275298..23275443) DBX|EK181313.5prime BLOC|join(23273271..23273317,23273375..23273521,23275298..23275443) DBX|EC01943.5prime BLOC|join(23273431..23273521,23275298..23275447,23325141..23325182) } EVD { PRG|blastx_masked DB|aa_SPTR.dmel CLA|protein DT|20041008 DBX|Q8SYJ2 BLOC|join(23273276..23273320,23273375..23273551) } EVD { PRG|blastx_masked DB|aa_SPTR.primate CLA|protein DT|20041008 DBX|O00483 BLOC|23273360..23273521 } EVD { PRG|promoter DB|dummy CLA|promoter DT|20041008 BLOC|23275350..23275351 } VERS|4.3 } # EOR GADR { RETE|ID 1 FBan0032231 GID 1 FBgn0052231 GSYM 1 CG32231 CGSYM 1 CG32231 ARM 1 3L CLOC 1 80E3-80E3 SCAF 1 AE002656 TRREC 1 AALEN 1 217 ID|FBan0032231 SYM|CG32231 GENSR { GSYM|CG32231 ID|FBgn0052231 } ARM|3L SCAF|AE002656 BLOC|complement(23234819..23235472) CLOCC|80E3-80E3 SQLEN|654 GO|biological process unknown ; GO:0000004 |cellular component unknown ; GO:0008372 |molecular function unknown ; GO:0005554 ID2|FBan0032231 DT|20040816 TRREC { NAM|CG32231-RA SYN|FlyBase:FBtr0070039 |FlyBase:FBpp0070038 |GB_protein:AAN11413.1 AANAM|CG32231-PA SQLEN|654 (-) AALEN|217 BLOC|complement(23234819..23235472) CDS|complement(23234822..23235472) CMT|status=not done DT|20040625 } EVD { PRG|sim4 DB|na_transcript.dmel.RELEASE31 CLA|mRNA DT|20041008 DBX|CG32231-RA.31 BLOC|complement(23234819..23235472) } EVD { PRG|repeatmasker DB|dummy CLA|RepeatMasker:dummy DT|20041008 DBX|AE003788 BLOC|complement(23234909..23235666) } EVD { PRG|sim4 DB|na_transcript.dmel.RELEASE32 CLA|mRNA DT|20041008 DBX|CG32231-RA.32 BLOC|complement(23234819..23235472) } VERS|4.3 } # EOR GADR { RETE|ID 1 FBan0012414 GID 1 FBgn0037212 GSYM 1 nAcRalpha-80B CGSYM 1 CG12414 ARM 1 3L CLOC 1 80E2-80E3 SCAF 1 AE002656 TRREC 1 AALEN 1 261 ID|FBan0012414 SYM|CG12414 GENSR { GSYM|nAcRalpha-80B ID|FBgn0037212 } ARM|3L SCAF|AE002656 BLOC|23182870..23218383 CLOCC|80E2-80E3 SQLEN|35514 GO|acetylcholine receptor activity ; GO:0015464 |muscle contraction ; GO:0006936 |nicotinic acetylcholine-gated receptor-channel complex ; GO:0005892 |neuromuscular synaptic transmission ; GO:0007274 |nerve-nerve synaptic transmission ; GO:0007270 |cation transport ; GO:0006812 |postsynaptic membrane ; GO:0045211 |nicotinic acetylcholine-activated cation-selective channel activity ; GO:0004889 ID2|FBan0012414 |FBgn0037211 SYN|CG17552 |D&agr;4 |Dalpha4 |nAcRaplha-80B |nAChR EST|EK131616 |EK147626 |EK192239 |EK131613 |EK147629 |EK097040 |EK161023 |EP01944 |EP07342 |EK179412 |EK230502 |EK092935 |EK147643 |EK147608 |EK147611 |EK147631 |EK147634 |EK147646 |EK131631 |EK131634 |EK292908 |CK01743 |EK075929 |EK216630 |EK150013 |LD20458 |EK143553 |EK088014 |EP00123 |CK02469 |EN01940 |EK239741 |EK142220 |EK142223 |EK008746 |EK142234 |EK142231 |EK131610 |EK131607 |EK147638 |EK147623 |EK044530 |EK147632 |EK147620 |EK147635 |EK147644 |EK147647 |EK131619 |EK131622 |EK147614 |EK147617 |EK147641 CDNA|LD20458 DT|20040809 TRREC { NAM|nAcRalpha-80B-RA SYN|FlyBase:FBtr0089255 |FlyBase Annotation IDs:CG12414-RA |FlyBase:FBpp0088315 |GB_protein:AAF45409.2 |FlyBase Annotation IDs:CG12414-PA |FlyBase:FBgn0071670 |FlyBase Annotation IDs:GA11619 |Dpse\GA11619 AANAM|nAcRalpha-80B-PA SQLEN|1844 AALEN|261 BLOC|join(23182870..23182966,23196549..23196664,23197640..23197808, |23197875..23198011,23198062..23198205,23203245..23203368,23212057..23212303, |23217574..23218383) CDS|join(23182943..23182966,23196549..23196664,23197640..23197808, |23197875..23198011,23198062..23198205,23203245..23203368,23212057..23212125) CMT|validation_flag=transposon in gene |protein_id=AAF45409 DT|20040625 } EVD { PRG|blastx_masked DB|aa_SPTR.othinv CLA|protein DT|20041008 DBX|Q7QET3 BLOC|join(23180837..23181040,23196534..23196665,23197638..23197811, |23197902..23197994,23198060..23198191,23203246..23203359,23212055..23212306, |23217571..23217768) DBX|Q7QF72 BLOC|join(23180837..23181040,23196534..23196665,23197638..23197811, |23197962..23197994,23198057..23198191,23212220..23212306,23217571..23217747) } EVD { PRG|sim4 DB|na_gadfly.dros.RELEASE2 CLA|mRNA DT|20041008 DBX|CT38583.2 BLOC|join(23137808..23138062,23144911..23145032,23161279..23161388, |23172678..23172862,23180820..23181028,23196549..23196664,23197640..23197808, |23197875..23198011,23198062..23198205,23212129..23212303,23217574..23218383) } EVD { PRG|repeatmasker DB|dummy CLA|RepeatMasker:dummy DT|20041008 DBX|nnnnnnnn BLOC|23185399..23185482 DBX|AF368900 BLOC|23185972..23186066 DBX|U66884 BLOC|23186497..23186814 DBX|nnnnnnnn BLOC|23190191..23190324 DBX|nnnnnnnn BLOC|23201111..23201372 DBX|nnnnnnnn BLOC|23205602..23207255 DBX|nnnnnnnn BLOC|23207260..23210657 DBX|U66884 BLOC|23211697..23211797 DBX|nnnnnnnn BLOC|23213309..23213396 DBX|AE003788 BLOC|23213454..23213805 DBX|nnnnnnnn BLOC|23214616..23215899 DBX|nnnnnnnn BLOC|23215951..23216169 DBX|nnnnnnnn BLOC|23216764..23217101 DBX|nnnnnnnn BLOC|23217109..23217341 } EVD { PRG|tblastx_masked DB|na_dbEST.insect CLA|EST DBX|BI503385 BLOC|join(23198060..23198194,23212255..23212290,23217571..23217717) DBX|BM624946 BLOC|join(23197668..23197955,23197872..23197994) DBX|BX618235 BLOC|join(23196534..23196665,23197638..23197955,23197872..23197994) DBX|BI510180 BLOC|23198006..23198203 } EVD { PRG|tblastxwrap_masked DB|na_scf_chunk_agambiae.fa CLA|DNA DT|20041008 DBX|AAAB01008859.1p11 BLOC|23217574..23217708 DBX|AAAB01008846.1p56 BLOC|23217574..23217708 DBX|AAAB01008846.1p93 BLOC|23217574..23217708 DBX|AAAB01008859.1p13 BLOC|23217574..23217717 DBX|AAAB01008811.1p13 BLOC|23217577..23217693 DBX|AAAB01008859.1p13 BLOC|23217580..23217708 DBX|AAAB01008846.1p93 BLOC|23196546..23196665 DBX|AAAB01008859.1p11 BLOC|23196549..23196665 DBX|AAAB01008846.1p56 BLOC|23196549..23196665 DBX|AAAB01008859.1p13 BLOC|23196579..23196665 DBX|AAAB01008846.1p93 BLOC|23197611..23197811 DBX|AAAB01008859.1p11 BLOC|23197623..23197811 DBX|AAAB01008799.1p26 BLOC|23197638..23197811 DBX|AAAB01008811.1p12 BLOC|23197638..23197811 DBX|AAAB01008944.1p13 BLOC|23197638..23197811 DBX|AAAB01008846.1p56 BLOC|23197638..23197811 DBX|AAAB01008811.1p13 BLOC|23197680..23197811 DBX|AAAB01008859.1p13 BLOC|23197680..23197811 DBX|AAAB01008859.1p13 BLOC|23197680..23197811 DBX|AAAB01008859.1p11 BLOC|23197872..23198009 DBX|AAAB01008811.1p13 BLOC|23197872..23198009 DBX|AAAB01008859.1p13 BLOC|23197872..23198009 DBX|AAAB01008846.1p56 BLOC|23197872..23198012 DBX|AAAB01008846.1p93 BLOC|23197872..23198012 DBX|AAAB01008859.1p13 BLOC|23197875..23198009 DBX|AAAB01008846.1p93 BLOC|23198063..23198149 DBX|AAAB01008859.1p13 BLOC|23198063..23198185 DBX|AAAB01008846.1p56 BLOC|23198063..23198191 DBX|AAAB01008846.1p93 BLOC|23212169..23212309 } EVD { PRG|sim4 DB|na_dbEST.same.dmel CLA|EST DBX|LD20458:contig2 BLOC|join(23212175..23212303,23217574..23218052) DBX|LD20458:contig1 BLOC|join(23182870..23182966,23196549..23196664,23197640..23197808, |23197875..23198011,23198062..23198178) } EVD { PRG|prosplign DB|aa_ncbi_other CLA|protein DT|20060123 DBX|AAU12503 BLOC|join(23144834..23145001,23149904..23149948,23161279..23161388, |23172678..23172858,23196549..23196664,23197640..23197808,23197875..23198011, |23198062..23198205,23198793..23198825,23199111..23199203,23201882..23201893, |23204235..23204255,23206576..23206610,23212083..23212303,23217574..23217708, |23218074..23218106) DBX|AAU12504 BLOC|join(23144786..23145001,23149904..23149948,23161279..23161388, |23180848..23181028,23196549..23196664,23197640..23197808,23197875..23198011, |23198062..23198187,23199454..23199482,23200162..23200222,23206254..23206389, |23206984..23207053,23210098..23210164,23212246..23212303,23217574..23217706, |23217756..23217817) DBX|AAU12505 BLOC|join(23144870..23145001,23149904..23149948,23161279..23161388, |23172678..23172858,23196549..23196664,23197640..23197808,23197875..23198011, |23198062..23198187,23201232..23201333,23202183..23202228,23205647..23205763, |23206070..23206237,23206908..23207028,23207449..23207517,23209792..23209861, |23210639..23210704,23212186..23212303,23217574..23217792) DBX|AAU12506 BLOC|join(23144804..23145001,23149904..23149948,23161279..23161388, |23172678..23172858,23196549..23196664,23197640..23197808,23197875..23198011, |23198062..23198205,23203245..23203358,23207168..23207176,23212057..23212303, |23217574..23217768) DBX|AAU12507 BLOC|join(23144804..23145001,23149904..23149948,23161279..23161388, |23180848..23181028,23196549..23196664,23197640..23197808,23197875..23198011, |23198062..23198205,23203245..23203358,23207168..23207176,23212057..23212303, |23217574..23217768) DBX|AAU12509 BLOC|join(23160812..23160862,23160953..23160988,23161279..23161388, |23172678..23172851,23196584..23196664,23197640..23197808,23197875..23198011, |23198062..23198250,23198482..23198592) DBX|AAU12510 BLOC|join(23160812..23160862,23161282..23161388,23172678..23172851, |23196584..23196664,23197640..23197808,23197875..23198011,23198062..23198250, |23198482..23198592) DBX|AAU12511 BLOC|join(23161057..23161131,23161282..23161388,23172678..23172858, |23196549..23196664,23197640..23197808,23197875..23198011,23198062..23198185) DBX|AAU12512 BLOC|join(23144822..23145001,23149904..23149948,23161279..23161388, |23172678..23172858,23196549..23196664,23197640..23197808,23197875..23198011, |23198062..23198205,23206113..23206234,23212206..23212303,23217574..23217703, |23217753..23217826) DBX|AAY28924 BLOC|join(23144762..23145001,23149904..23149948,23161279..23161388, |23172678..23172858,23196549..23196664,23197640..23197808,23197875..23198011, |23198062..23198205,23206239..23206389,23206984..23207025,23209884..23209920, |23212254..23212303,23217574..23217717) DBX|AAY28925 BLOC|join(23144762..23145001,23149904..23149948,23161279..23161388, |23172678..23172858,23196549..23196664,23197640..23197808,23197875..23198011, |23198062..23198205,23202253..23202270,23205272..23205312,23207476..23207499, |23209111..23209170,23209343..23209363,23212176..23212303,23217574..23217717) DBX|CAI54098 BLOC|join(23144822..23145001,23149904..23149948,23161279..23161388, |23172678..23172858,23196549..23196664,23197640..23197808,23197875..23198011, |23198062..23198187,23206840..23206871,23207001..23207028,23210087..23210164, |23212015..23212303,23217574..23217762) DBX|CAI54099 BLOC|join(23144762..23145001,23149904..23149948,23161279..23161388, |23172678..23172858,23196549..23196664,23197640..23197808,23197875..23198011, |23198062..23198205,23206239..23206354,23206848..23206871,23208655..23208681, |23209921..23209935,23212107..23212154,23212254..23212303,23217574..23217717) DBX|CAI54101 BLOC|join(23144837..23145001,23149904..23149948,23161279..23161388, |23172678..23172858,23196549..23196664,23197640..23197808,23197875..23198011, |23198062..23198205,23202343..23202373,23202699..23202721,23206497..23206517, |23210514..23210580,23211309..23211322,23212057..23212303,23217574..23217741) DBX|ABB42999 BLOC|join(23180407..23180527,23180724..23181028,23196549..23196664, |23197640..23197730) DBX|ABB43000 BLOC|join(23180437..23180527,23180724..23181028,23196549..23196664, |23197640..23197727) DBX|ABB43001 BLOC|join(23180437..23180527,23180724..23181028,23196549..23196664, |23197640..23197808,23197875..23197994) DBX|ABB43002 BLOC|join(23160840..23160956,23161279..23161388,23172678..23172858, |23196549..23196664,23197640..23197808,23197875..23198011,23198062..23198187, |23198458..23198503) DBX|ABB43003 BLOC|join(23180437..23180527,23180724..23181028,23196549..23196664, |23197640..23197754) DBX|NP_001023847 BLOC|join(23144819..23145001,23149904..23149948,23161279..23161388, |23172678..23172862,23178266..23178292,23178834..23178853,23181470..23181480, |23184337..23184363,23197640..23197808,23197875..23198011,23198062..23198196, |23198250..23198451,23198509..23198622) DBX|NP_509745 BLOC|join(23160842..23160988,23161279..23161388,23180848..23181042, |23187879..23187906,23194633..23194655,23196584..23196664,23197640..23197808, |23197875..23198011,23198062..23198205,23198972..23198999,23199571..23199609, |23199968..23200009,23205738..23205763,23207519..23207552,23208165..23208209, |23217574..23217711,23217984..23218049) } EVD { PRG|sim4 DB|na_transcript.dmel.RELEASE32 CLA|mRNA DT|20041008 DBX|CG12414-80B-RA.32 BLOC|join(23182870..23182966,23196549..23196664,23197640..23197808, |23197875..23198011,23198062..23198205,23203245..23203368,23212057..23212303, |23217574..23218383) } EVD { PRG|sim4 DB|na_transcript.dmel.RELEASE31 CLA|mRNA DT|20041008 DBX|CG12414-RA.31 BLOC|join(23182870..23182966,23196549..23196664,23197640..23197808, |23197875..23198011,23198062..23198205,23203245..23203368,23212057..23212303, |23217574..23218383) } EVD { PRG|sim4tandem DB|na_gb.dmel CLA|so DT|20050823 DBX|LD20458 BLOC|join(23182870..23182966,23196549..23196664,23197640..23197808, |23197875..23198011,23198062..23198205,23203245..23203368,23212057..23212303, |23217574..23218063) DBX|AJ272159 BLOC|join(23144758..23145001,23149904..23149948,23161279..23161388, |23172678..23172858,23196549..23196664,23197640..23197808,23197875..23198011, |23198062..23198205,23203245..23203368,23212057..23212303,23217574..23218051) } EVD { PRG|blastx_masked DB|aa_SPTR.insect CLA|protein DT|20041008 DBX|P91766 BLOC|join(23180837..23181040,23196534..23196665,23197638..23197811, |23197962..23197994,23198057..23198200,23212103..23212306,23217571..23217765) DBX|O46128 BLOC|join(23180837..23181040,23196534..23196665,23197638..23197811, |23197962..23197994,23198057..23198200,23212073..23212306,23217571..23217768) DBX|O46132 BLOC|join(23180846..23181040,23196534..23196665,23197638..23197811, |23197902..23197994,23198060..23198206,23203267..23203287,23212100..23212306, |23217571..23217768) } EVD { PRG|blastx_masked DB|aa_SPTR.rodent CLA|protein DT|20041008 DBX|Q9CYK8 BLOC|join(23180837..23181073,23196603..23196665,23197638..23197811, |23197962..23197994,23198060..23198197) DBX|Q8BMN3 BLOC|join(23180837..23181073,23196603..23196665,23197638..23197811, |23197962..23197994,23198060..23198197) DBX|AAH58193 BLOC|join(23180837..23181073,23196603..23196665,23197638..23197811, |23197962..23197994,23198060..23198197) } EVD { PRG|repeat_runner_seg DB|dummy CLA|repeat_runner_seg DT|20041008 BLOC|23216754..23217433 BLOC|23214606..23216256 BLOC|23214208..23214582 BLOC|23213170..23213815 BLOC|23212932..23213057 BLOC|23211687..23211807 BLOC|23205592..23210667 BLOC|23202982..23203214 BLOC|23201894..23202748 BLOC|23201402..23201688 BLOC|23199764..23201382 BLOC|23198911..23199054 BLOC|23197195..23197546 BLOC|23195409..23195674 BLOC|23195215..23195338 BLOC|23194665..23194963 BLOC|23194578..23194656 BLOC|23194116..23194449 BLOC|23193827..23193991 BLOC|23193417..23193685 BLOC|23192948..23193292 BLOC|23192507..23192909 BLOC|23192112..23192485 BLOC|23190605..23190728 BLOC|23190181..23190334 BLOC|23188198..23188463 BLOC|23186454..23186824 BLOC|23185962..23186076 BLOC|23185389..23185492 BLOC|23184308..23184373 BLOC|23182870..23183039 } EVD { PRG|tblastxwrap_masked DB|na_baylorf1_scfchunk.dpse CLA|so DT|20041008 DBX|Contig7635_Contig6082-1 BLOC|23196531..23196665 DBX|Contig7446_Contig2444-4 BLOC|23196543..23196665 DBX|Contig3286_Contig7811A.fa-3 BLOC|23196546..23196665 DBX|Contig3286_Contig7811A.fa-3 BLOC|23197623..23197811 DBX|Contig7446_Contig2444-4 BLOC|23197635..23197811 DBX|Contig7635_Contig6082-1 BLOC|23197638..23197811 DBX|Contig7471_Contig6056-5 BLOC|23197638..23197811 DBX|Contig2212_Contig7437-1 BLOC|23197638..23197811 DBX|Contig3286_Contig7811A.fa-3 BLOC|23197680..23197811 DBX|Contig2341_Contig3968-2 BLOC|23197680..23197811 DBX|Contig7446_Contig2444-4 BLOC|23197869..23198012 DBX|Contig3286_Contig7811A.fa-3 BLOC|23197872..23198009 DBX|Contig3286_Contig7811A.fa-3 BLOC|23197872..23198009 DBX|Contig3286_Contig7811A.fa-3 BLOC|23197872..23198009 DBX|Contig2341_Contig3968-2 BLOC|23197872..23198009 DBX|Contig7635_Contig6082-1 BLOC|23197875..23198012 DBX|Contig3286_Contig7811A.fa-3 BLOC|23198063..23198185 DBX|Contig7446_Contig2444-4 BLOC|23198063..23198191 DBX|Contig7635_Contig6082-1 BLOC|23198063..23198206 DBX|Contig7635_Contig6082-1 BLOC|23203240..23203374 DBX|Contig7635_Contig6082-1 BLOC|23212052..23212306 DBX|Contig7446_Contig2444-4 BLOC|23217574..23217708 DBX|Contig3286_Contig7811A.fa-3 BLOC|23217574..23217708 DBX|Contig7635_Contig6082-1 BLOC|23217574..23217768 DBX|Contig2341_Contig3968-2 BLOC|23217577..23217693 DBX|Contig3286_Contig7811A.fa-3 BLOC|23217580..23217696 } EVD { PRG|blastx_masked DB|aa_SPTR.othvert CLA|protein DT|20041008 DBX|P18257 BLOC|join(23180837..23181043,23196603..23196665,23197671..23197814) DBX|P09480 BLOC|join(23180837..23181040,23197641..23197811,23197962..23197994, |23198060..23198185) DBX|P13908 BLOC|join(23180837..23181043,23196603..23196665,23197671..23197811) } EVD { PRG|sim4 DB|na_dbEST.diff.dmel CLA|EST DBX|EK131616.5prime BLOC|join(23212055..23212303,23217574..23217858) DBX|EK147626.5prime BLOC|join(23212065..23212303,23217574..23217858) DBX|EK192239.5prime BLOC|join(23212067..23212303,23217574..23217680) DBX|EK131613.5prime BLOC|join(23212095..23212303,23217574..23217858) DBX|EK147629.5prime BLOC|join(23212125..23212303,23217574..23217858) DBX|EK097040.5prime BLOC|23213136..23213528 DBX|EK161023.5prime BLOC|23213147..23213613 DBX|EP01944.3prime BLOC|23213567..23214069 DBX|EP07342.3prime BLOC|23214983..23215433 DBX|EK179412.5prime BLOC|23216468..23217082 DBX|EK230502.5prime BLOC|23216537..23216826 DBX|EK092935.5prime BLOC|23217662..23218046 DBX|EK147643.5prime BLOC|23217662..23218174 DBX|EK147608.5prime BLOC|23217662..23218189 DBX|EK147611.5prime BLOC|23217662..23218189 DBX|EK147631.5prime BLOC|23217662..23218189 DBX|EK147634.5prime BLOC|23217662..23218189 DBX|EK147646.5prime BLOC|23217662..23218189 DBX|EK131631.5prime BLOC|23217662..23218189 DBX|EK131634.5prime BLOC|23217662..23218189 DBX|EK292908.5prime BLOC|23217682..23218158 DBX|CK01743.contig BLOC|23217729..23218383 DBX|EK075929.5prime BLOC|23217754..23218156 DBX|EK216630.5prime BLOC|23217754..23218174 DBX|EK150013.5prime BLOC|23218321..23218776 DBX|EK143553.5prime BLOC|23203362..23203942 DBX|EK088014.5prime BLOC|23204228..23204714 DBX|EP00123.3prime BLOC|join(23204396..23204482,23212057..23212154) DBX|CK02469:contig2 BLOC|join(23207169..23207255,23207265..23207798) DBX|CK02469:contig1 BLOC|23206575..23207144 DBX|EN01940.5prime BLOC|23208419..23208572 DBX|EK239741.5prime BLOC|23211962..23212301 DBX|EK142220.5prime BLOC|23211962..23212394 DBX|EK142223.5prime BLOC|23211962..23212394 DBX|EK008746.5prime BLOC|23212036..23212295 DBX|EK142234.5prime BLOC|join(23212036..23212303,23217574..23217806) DBX|EK142231.5prime BLOC|join(23212036..23212303,23217574..23217883) DBX|EK131610.5prime BLOC|join(23212036..23212303,23217574..23217888) DBX|EK131607.5prime BLOC|join(23212036..23212303,23217574..23217957) DBX|EK147638.5prime BLOC|join(23212050..23212303,23217574..23217858) DBX|EK147623.5prime BLOC|join(23212053..23212303,23217574..23217709) DBX|EK044530.5prime BLOC|join(23212053..23212303,23217574..23217716) DBX|EK147632.5prime BLOC|join(23212053..23212303,23217574..23217833) DBX|EK147620.5prime BLOC|join(23212053..23212303,23217574..23217857) DBX|EK147635.5prime BLOC|join(23212053..23212303,23217574..23217857) DBX|EK147644.5prime BLOC|join(23212053..23212303,23217574..23217857) DBX|EK147647.5prime BLOC|join(23212053..23212303,23217574..23217857) DBX|EK131619.5prime BLOC|join(23212053..23212303,23217574..23217857) DBX|EK131622.5prime BLOC|join(23212053..23212303,23217574..23217857) DBX|EK147614.5prime BLOC|join(23212055..23212303,23217574..23217858) DBX|EK147617.5prime BLOC|join(23212055..23212303,23217574..23217858) DBX|EK147641.5prime BLOC|join(23212055..23212303,23217574..23217858) } EVD { PRG|blastx_masked DB|aa_SPTR.dmel CLA|protein DT|20041008 DBX|Q8T7R9 BLOC|23197638..23197811 DBX|P09478 BLOC|join(23180837..23181040,23196534..23196665,23197623..23197811, |23197962..23197994,23198060..23198185,23217565..23217708) DBX|O44202 BLOC|join(23180837..23181040,23196534..23196665,23197638..23197811, |23197962..23197994,23198057..23198191,23212229..23212306,23217571..23217747) DBX|Q9W3G6 BLOC|join(23180837..23181040,23196534..23196665,23197638..23197811, |23198060..23198191,23212229..23212306,23217571..23217747) DBX|Q9NFR5 BLOC|join(23180837..23181040,23196534..23196665,23197638..23197811, |23197902..23197994,23198060..23198203,23203234..23203362,23212055..23212306, |23217571..23217768) DBX|O18394 BLOC|join(23180837..23181040,23196534..23196665,23197638..23197811, |23197962..23197994,23198057..23198191,23212229..23212306,23217571..23217747) DBX|AAR82815 BLOC|23197638..23197811 DBX|Q8T7S0 BLOC|23217583..23217681 DBX|Q8T7S3 BLOC|23197638..23197811 DBX|Q8T7S2 BLOC|23197638..23197811 DBX|AAR82815 BLOC|23191519..23191608 DBX|Q9VWI9 BLOC|23197638..23197811 DBX|Q8T7V5 BLOC|23197638..23197811 DBX|Q86MN8 BLOC|23197638..23197811 DBX|Q8T7S2 BLOC|23191519..23191608 DBX|Q8T7S1 BLOC|23217583..23217681 DBX|Q86MN7 BLOC|23197638..23197811 DBX|Q8T7S0 BLOC|23197638..23197811 DBX|Q86MN8 BLOC|23191519..23191608 DBX|Q9VJT9 BLOC|join(23180837..23181031,23197638..23197811,23198018..23198140) DBX|Q9NKD1 BLOC|23197638..23197811 DBX|P04755 BLOC|join(23197680..23197811,23198003..23198185,23212166..23212291, |23217571..23217714) DBX|Q8T7S1 BLOC|23197638..23197811 DBX|Q9W5V6 BLOC|join(23196549..23196665,23197638..23197811,23197902..23197994, |23198060..23198203,23203234..23203368,23212057..23212125) DBX|Q9VWI9 BLOC|23196534..23196785 DBX|Q8T7S0 BLOC|23191519..23191608 DBX|Q95RL8 BLOC|join(23196549..23196665,23197638..23197811,23197902..23197994, |23198060..23198203,23203234..23203362,23212055..23212306,23217571..23217768) DBX|Q86MN7 BLOC|23196534..23196785 DBX|Q8T7S1 BLOC|23191519..23191608 DBX|P17644 BLOC|join(23180837..23181040,23196546..23196665,23197638..23197811, |23197962..23197994,23198060..23198185,23217565..23217696) DBX|Q9NKD1 BLOC|23196600..23196785 DBX|P25162 BLOC|join(23180852..23181040,23196534..23196665,23197638..23197811, |23197962..23197994,23198060..23198191,23217571..23217717) } EVD { PRG|blastx_masked DB|aa_SPTR.worm CLA|protein DT|20041008 DBX|Q27218 BLOC|join(23180837..23181067,23198012..23198185) DBX|Q9N587 BLOC|join(23180837..23181040,23197638..23197811,23197962..23197994, |23198060..23198185,23212184..23212306,23217568..23217696) DBX|Q23355 BLOC|join(23180837..23181025,23197623..23197814,23197962..23197994, |23198060..23198179,23217571..23217708) } EVD { PRG|blastx_masked DB|aa_SPTR.primate CLA|protein DT|20041008 DBX|P43681 BLOC|join(23180837..23181073,23197641..23197811,23197962..23197994, |23198060..23198188,23217574..23217672) DBX|Q05901 BLOC|join(23180837..23181073,23196603..23196665,23197674..23197811) DBX|P30926 BLOC|join(23180837..23181067,23197665..23197811,23197962..23197994, |23198051..23198185,23217568..23217690) } EVD { PRG|promoter DB|dummy CLA|promoter DT|20041008 BLOC|23217622..23217623 BLOC|23214553..23214554 BLOC|23213295..23213296 BLOC|23211146..23211147 BLOC|23205676..23205677 BLOC|23205017..23205018 BLOC|23197888..23197889 BLOC|23196553..23196554 BLOC|23189692..23189693 BLOC|23186694..23186695 BLOC|23183641..23183642 } VERS|4.3 } # EOR GADR { RETE|ID 1 FBan0032350 GID 1 FBgn0052350 GSYM 1 CG32350 CGSYM 1 CG32350 ARM 1 3L CLOC 1 80D3-80D3 SCAF 1 AE002656 TRREC 1 AALEN 1 830 ID|FBan0032350 SYM|CG32350 GENSR { GSYM|CG32350 ID|FBgn0052350 } ARM|3L SCAF|AE002656 BLOC|complement(23081494..23084330) CLOCC|80D3-80D3 SQLEN|2837 GO|zinc ion binding ; GO:0008270 |protein ubiquitination ; GO:0016567 |ubiquitin ligase complex ; GO:0000151 |ubiquitin-protein ligase activity ; GO:0004842 |protein transport ; GO:0015031 ID2|FBan0032350 |FBgn0062459 SYN|BcDNA:LD20292 EST|EK188409 |GM02156 |EK146627 |EK200257 |EK216325 |EK116513 |EK190449 |EK132330 |LD11708 |RE09246 |LD08723 |RE64514 |RE65912 |LD04466 |RE73063 |RE61202 |RE67749 |LD04522 |LD11503 |LD14317 |EP20764 |EK104508 |EK010618 |EK207220 |LD03874 |EK184860 |RE28746 |EK259138 |RE42384 |EK047518 |RE30212 |EK144523 |RE28062 |EK192962 |RE19777 |EK250806 |LD20292 |RE43713 |RE30578 |RE72158 |EK221629 |EK148747 |EK119340 |EK119734 |RE08190 |EK118751 |RE08192 |EK251556 |RE17533 |EP18331 |RE45546 |GM10157 |RE44848 |EK270279 |RE71761 |EK246725 |RE48277 |RE50021 CDNA|LD20292 CMT|problem=true DT|20031201 TRREC { NAM|CG32350-RA SYN|FlyBase:FBtr0070046 |FlyBase:FBpp0070045 |GB_protein:AAN11410.1 AANAM|CG32350-PA SQLEN|2837 (-) AALEN|830 BLOC|complement(23081494..23084330) CDS|complement(23081739..23084228) CMT|protein_id=AAN11410 DT|20020528 } EVD { PRG|blastx_masked DB|aa_SPTR.othinv CLA|protein DT|20041008 DBX|Q9P5N6 BLOC|complement(23082786..23084039) DBX|Q7QCK0 BLOC|complement(23083116..23084111) DBX|Q7QCK0 BLOC|complement(23081892..23082104,23082816..23083646) } EVD { PRG|tblastxwrap_masked DB|na_scf_chunk_agambiae.fa CLA|DNA DT|20041008 DBX|AAAB01008859.1p64 BLOC|complement(23082852..23083064) DBX|AAAB01008859.1p64 BLOC|complement(23083320..23083496) } EVD { PRG|sim4 DB|na_dbEST.same.dmel CLA|EST DBX|LD11708.5prime BLOC|complement(23083189..23083778) DBX|RE09246.5prime BLOC|complement(23083880..23084139) DBX|LD08723.5prime BLOC|complement(23083664..23084252) DBX|RE64514.5prime BLOC|complement(23083609..23084264) DBX|RE65912.5prime BLOC|complement(23083781..23084264) DBX|LD04466.5prime BLOC|complement(23083752..23084273) DBX|RE73063.5prime BLOC|complement(23083623..23084291) DBX|RE61202.5prime BLOC|complement(23083671..23084291) DBX|RE67749.5prime BLOC|complement(23083708..23084291) DBX|LD04522.5prime BLOC|complement(23083928..23084304) DBX|LD11503.5prime BLOC|complement(23083644..23084307) DBX|LD14317.5prime BLOC|complement(23083897..23084307) DBX|LD03874.5prime BLOC|complement(23083744..23084312) DBX|RE28746.5prime BLOC|complement(23083643..23084325) DBX|RE42384.5prime BLOC|complement(23083661..23084325) DBX|RE30212.5prime BLOC|complement(23083699..23084325) DBX|RE28062.5prime BLOC|complement(23083707..23084325) DBX|RE19777.5prime BLOC|complement(23083775..23084325) DBX|LD20292:contig2 BLOC|complement(23081497..23082067) DBX|LD20292:contig1 BLOC|complement(23083662..23084330) DBX|RE43713.5prime BLOC|complement(23083616..23084335) DBX|RE30578.5prime BLOC|complement(23083659..23084335) DBX|RE72158.5prime BLOC|complement(23083737..23084335) DBX|RE08190.5prime BLOC|complement(23083785..23084335) DBX|RE08192.5prime BLOC|complement(23083788..23084335) DBX|RE17533.5prime BLOC|complement(23083894..23084335) DBX|RE45546.5prime BLOC|complement(23083707..23084336) DBX|RE44848.5prime BLOC|complement(23083766..23084336) DBX|RE71761.5prime BLOC|complement(23083738..23084337) DBX|RE48277.5prime BLOC|complement(23083782..23084338) DBX|RE50021.5prime BLOC|complement(23083803..23084338) } EVD { PRG|sim4 DB|na_transcript.dmel.RELEASE32 CLA|mRNA DT|20041008 DBX|CG32350-RA.32 BLOC|complement(23081494..23084330) } EVD { PRG|sim4 DB|na_transcript.dmel.RELEASE31 CLA|mRNA DT|20041008 DBX|CG32350-RA.31 BLOC|complement(23081494..23084330) } EVD { PRG|sim4tandem DB|na_gb.dmel CLA|cDNA DT|20050823 DBX|LD20292 BLOC|complement(23081496..23084330) } EVD { PRG|genscan_masked DB|dummy CLA|genscan_masked DT|20041008 BLOC|complement(23081736..23084228) } EVD { PRG|prosplign DB|aa_ncbi_dmel CLA|protein DT|20060123 DBX|AAS93769 BLOC|complement(23081739..23082671,23082729..23082995) } EVD { PRG|blastx_masked DB|aa_SPTR.rodent CLA|protein DT|20041008 DBX|Q91W86 BLOC|complement(23082789..23084159) DBX|Q8C027 BLOC|complement(23082789..23084159) DBX|AAH29004 BLOC|complement(23082789..23084159) } EVD { PRG|tblastxwrap_masked DB|na_baylorf1_scfchunk.dpse CLA|so DT|20041008 DBX|Contig3286_Contig7811B.fa-1 BLOC|complement(23081883..23082620) DBX|Contig3286_Contig7811B.fa-1 BLOC|complement(23082867..23083229) DBX|Contig3286_Contig7811B.fa-1 BLOC|complement(23083209..23083331) DBX|Contig3286_Contig7811B.fa-1 BLOC|complement(23083356..23083646) DBX|Contig3286_Contig7811B.fa-1 BLOC|complement(23083650..23083889) DBX|Contig3286_Contig7811B.fa-1 BLOC|complement(23083809..23084231) } EVD { PRG|sim4 DB|na_dbEST.diff.dmel CLA|EST DBX|EK188409.5prime BLOC|complement(23083155..23083454) DBX|GM02156.5prime BLOC|complement(23083385..23083876) DBX|EK146627.5prime BLOC|complement(23083551..23084068) DBX|EK200257.5prime BLOC|complement(23083668..23084109) DBX|EK216325.5prime BLOC|complement(23083717..23084215) DBX|EK116513.5prime BLOC|complement(23083821..23084289) DBX|EK190449.5prime BLOC|complement(23083851..23084330) DBX|EK132330.5prime BLOC|complement(23083669..23084336) DBX|EP20764.3prime BLOC|complement(23081496..23081871) DBX|EK104508.5prime BLOC|complement(23081466..23081982) DBX|EK010618.5prime BLOC|complement(23081499..23081996) DBX|EK207220.5prime BLOC|complement(23081507..23081996) DBX|EK184860.5prime BLOC|complement(23081520..23081996) DBX|EK259138.5prime BLOC|complement(23081548..23081996) DBX|EK047518.5prime BLOC|complement(23081735..23082117) DBX|EK144523.5prime BLOC|complement(23081735..23082117) DBX|EK192962.5prime BLOC|complement(23081735..23082117) DBX|EK250806.5prime BLOC|complement(23081779..23082226) DBX|EK221629.5prime BLOC|complement(23082351..23082753) DBX|EK148747.5prime BLOC|complement(23082328..23082803) DBX|EK119340.5prime BLOC|complement(23082335..23082806) DBX|EK119734.5prime BLOC|complement(23082335..23082806) DBX|EK118751.5prime BLOC|complement(23082477..23082806) DBX|EK251556.5prime BLOC|complement(23082420..23082872) DBX|EP18331.3prime BLOC|complement(23082351..23082941) DBX|GM10157.5prime BLOC|complement(23082261..23082673,23082729..23082997) DBX|EK270279.5prime BLOC|complement(23082737..23083100) DBX|EK246725.5prime BLOC|complement(23082692..23083113) } EVD { PRG|blastx_masked DB|aa_SPTR.dmel CLA|protein DT|20041008 DBX|Q7PL66 BLOC|complement(23081474..23081509) DBX|Q7PL66 BLOC|complement(23083665..23083718) DBX|Q8SX81 BLOC|complement(23081742..23084228) DBX|Q967T2 BLOC|complement(23082732..23082815) } EVD { PRG|blastx_masked DB|aa_SPTR.worm CLA|protein DT|20041008 DBX|Q09600 BLOC|complement(23081901..23082149,23082156..23082236,23082897..23083922) } EVD { PRG|blastx_masked DB|aa_SPTR.plant CLA|protein DT|20041008 DBX|Q7XVC4 BLOC|complement(23082819..23083988) DBX|Q9SJ40 BLOC|complement(23082840..23083508,23083140..23084021) } EVD { PRG|blastx_masked DB|aa_SPTR.primate CLA|protein DT|20041008 DBX|AAH65563 BLOC|complement(23082789..23084129) DBX|Q9H270 BLOC|complement(23082789..23084129) } EVD { PRG|promoter DB|dummy CLA|promoter DT|20041008 BLOC|complement(23081492..23081493) } EVD { PRG|blastx_masked DB|aa_SPTR.yeast CLA|protein DT|20041008 DBX|P12868 BLOC|complement(23082963..23084222) } VERS|4.3 } # EOR GADR { RETE|ID 1 FBan0034031 GID 1 FBgn0054031 GSYM 1 CG34031 CGSYM 1 CG34031 ARM 1 3L CLOC 1 80D4-80D4 TRREC 1 AALEN 1 202 ID|FBan0034031 SYM|CG34031 GENSR { GSYM|CG34031 ID|FBgn0054031 } ARM|3L BLOC|23118149..23119532 CLOCC|80D4-80D4 SQLEN|1384 SYN|BP1068 |HDC11617 DT|20050912 TRREC { NAM|CG34031-RA SYN|FlyBase:FBtr0100086 |FlyBase:FBex0073285 |FlyBase Annotation IDs:CG34031:3 |FlyBase:FBex0073286 |FlyBase Annotation IDs:CG34031:2 |FlyBase:FBex0073287 |FlyBase Annotation IDs:CG34031:1 |FlyBase:FBpp0099442 |GB_protein:ABC66117.1 AANAM|CG34031-PA SQLEN|609 AALEN|202 BLOC|join(23118149..23118272,23118978..23119172,23119243..23119532) CDS|join(23118149..23118272,23118978..23119172,23119243..23119529) CMT|date=Thu Aug 11 15:08:59 PDT 2005 |comment=Intron (r4:23119173..23119242) verified by RT-PCR product from amplicon (r4:23119111..23119359); | BP1068 in FBrf0183657 DT|20050912 } EVD { PRG|blastx_masked DB|aa_SPTR.othinv CLA|protein DT|20041008 DBX|Q7QFH4 BLOC|23119272..23119445 DBX|O46126 BLOC|23119269..23119460 DBX|Q25056 BLOC|23119254..23119427 } EVD { PRG|blastx_masked DB|aa_SPTR.insect CLA|protein DT|20041008 DBX|P15858 BLOC|23119272..23119445 DBX|Q7PFW5 BLOC|23119245..23119427 DBX|Q7PQE6 BLOC|23119236..23119475 } EVD { PRG|prosplign DB|aa_ncbi_dmel CLA|protein DT|20060123 DBX|AAV36982 BLOC|join(23118861..23118881,23119032..23119052,23119269..23119442) DBX|AAY51537 BLOC|23119311..23119442 } EVD { PRG|blastx_masked DB|aa_SPTR.rodent CLA|protein DT|20041008 DBX|O08713 BLOC|23119272..23119445 DBX|Q8BJ04 BLOC|23119272..23119481 DBX|Q7TNS3 BLOC|23119272..23119481 } EVD { PRG|repeat_runner_seg DB|dummy CLA|repeat_runner_seg DT|20041008 BLOC|23118068..23118269 } EVD { PRG|blastx_masked DB|aa_SPTR.othvert CLA|protein DT|20041008 DBX|Q9DFC4 BLOC|join(23119272..23119481,23119683..23119808) DBX|Q8JG20 BLOC|23119272..23119481 DBX|Q90XN8 BLOC|23119272..23119472 } EVD { PRG|tblastxwrap_masked DB|na_baylorf1_scfchunk.dpse CLA|so DT|20041008 DBX|Contig7487_Contig8004-1 BLOC|23119272..23119475 DBX|Contig4971_Contig7717B.fa-1 BLOC|23119245..23119484 DBX|Contig143_Contig447-2 BLOC|23119251..23119442 DBX|Contig1160_Contig3376-5 BLOC|23119272..23119439 DBX|Contig1160_Contig3376-4 BLOC|23119272..23119439 DBX|Contig4374_Contig4847-4 BLOC|23119272..23119442 DBX|Contig4374_Contig4847-3 BLOC|23119272..23119445 DBX|Contig4374_Contig4847-4 BLOC|23119272..23119445 DBX|Contig1988_Contig2463-1 BLOC|23119272..23119457 DBX|Contig446_Contig3289-6 BLOC|23119272..23119472 } EVD { PRG|blastx_masked DB|aa_SPTR.dmel CLA|protein DT|20041008 DBX|Q9VD99 BLOC|23119236..23119475 DBX|Q9V3K6 BLOC|23119272..23119457 DBX|P09090 BLOC|23119272..23119457 DBX|Q8T3Z5 BLOC|23119269..23119469 DBX|Q24255 BLOC|23119272..23119481 DBX|Q9VFK4 BLOC|23119272..23119445 DBX|O61640 BLOC|23119272..23119445 DBX|Q9VSC2 BLOC|23119272..23119475 DBX|Q9W0Z8 BLOC|23119272..23119448 DBX|P20009 BLOC|23119272..23119448 DBX|Q04787 BLOC|23119272..23119457 DBX|Q24256 BLOC|23119272..23119481 DBX|P05527 BLOC|23119269..23119469 DBX|Q9U984 BLOC|23119239..23119481 DBX|P22807 BLOC|23119272..23119445 DBX|Q9V943 BLOC|23119269..23119478 DBX|Q9VCY0 BLOC|23119239..23119481 DBX|Q9VEI8 BLOC|23119272..23119472 DBX|Q8MZ02 BLOC|23119269..23119478 DBX|P02836 BLOC|23119245..23119469 DBX|Q26381 BLOC|23119239..23119481 } EVD { PRG|tblastx_masked DB|na_dbEST.insect CLA|EST DBX|BX615786 BLOC|23119272..23119472 DBX|AV398537 BLOC|23119272..23119481 DBX|AJ280528 BLOC|23119245..23119475 } EVD { PRG|blastx_masked DB|aa_SPTR.worm CLA|protein DT|20041008 DBX|P26797 BLOC|23119245..23119463 DBX|Q09604 BLOC|23119251..23119442 DBX|AAQ23123 BLOC|23119245..23119463 } EVD { PRG|blastx_masked DB|aa_SPTR.primate CLA|protein DT|20041008 DBX|P35548 BLOC|23119251..23119463 DBX|O43763 BLOC|23119236..23119478 DBX|AAP88816 BLOC|23119251..23119463 } EVD { PRG|tblastxwrap_masked DB|na_scf_chunk_agambiae.fa CLA|DNA DT|20041008 DBX|AAAB01008846.1p94 BLOC|23119245..23119475 DBX|AAAB01008888.1p26 BLOC|23119251..23119463 DBX|AAAB01008850.1p2 BLOC|23119266..23119442 DBX|AAAB01008888.1p29 BLOC|23119272..23119439 DBX|AAAB01008961.1p5 BLOC|23119272..23119442 DBX|AAAB01008850.1p2 BLOC|23119272..23119445 DBX|AAAB01008961.1p4 BLOC|23119272..23119445 DBX|AAAB01008850.1p3 BLOC|23119272..23119445 DBX|AAAB01008850.1p7 BLOC|23119272..23119448 DBX|AAAB01008960.1p5 BLOC|23119272..23119478 } EVD { PRG|prosplign DB|aa_ncbi_other CLA|protein DT|20060123 DBX|NP_499575 BLOC|join(23119041..23119130,23119272..23119444,23119836..23119869) DBX|NP_505732 BLOC|join(23118879..23118929,23118987..23119139,23119185..23119253, |23119272..23119456,23119692..23119775) DBX|NP_505952 BLOC|join(23118983..23119048,23119266..23119445) DBX|AAQ98853 BLOC|join(23118862..23118954,23119266..23119448) DBX|AAQ98854 BLOC|join(23118796..23118849,23118862..23118957,23119266..23119448) DBX|AAS17755 BLOC|join(23119314..23119456,23119665..23119806) DBX|AAT44524 BLOC|23119305..23119444 DBX|AAT44526 BLOC|23119281..23119448 DBX|AAT92561 BLOC|join(23119305..23119511,23119762..23119833) DBX|AAT94171 BLOC|join(23119323..23119456,23119836..23119905) DBX|AAW21975 BLOC|join(23118821..23118931,23119251..23119444,23119683..23119827) DBX|AAW47716 BLOC|23119272..23119442 DBX|AAX86466 BLOC|join(23119052..23119172,23119243..23119433) DBX|AAX86470 BLOC|join(23118984..23119097,23119266..23119448) DBX|BAD51739 BLOC|join(23119257..23119501,23119927..23119957) DBX|BAD90996 BLOC|23119359..23119481 DBX|BAD90997 BLOC|23119359..23119454 DBX|BAD90999 BLOC|23119329..23119466 DBX|NP_005510 BLOC|join(23119013..23119072,23119073..23119172,23119243..23119506, |23119823..23119944) DBX|BAE44510 BLOC|join(23119272..23119571,23119686..23119778) DBX|NP_001021166 BLOC|join(23119079..23119172,23119274..23119460,23119834..23119887) DBX|NP_001021167 BLOC|join(23119079..23119172,23119274..23119460,23119834..23119887) DBX|NP_001021797 BLOC|join(23118848..23119074,23119274..23119520) DBX|NP_001022941 BLOC|join(23119041..23119130,23119272..23119457) DBX|NP_001023141 BLOC|23119245..23119562 DBX|NP_001023142 BLOC|join(23118812..23119070,23119243..23119562) DBX|NP_498697 BLOC|join(23119058..23119108,23119133..23119189,23119266..23119460, |23119834..23119887) } VERS|4.3 } # EOR GADR { RETE|ID 1 FBan0033217 GID 1 FBgn0053217 GSYM 1 CG33217 CGSYM 1 CG33217 ARM 1 3L CLOC 1 80D2-80D2 SCAF 1 AE002786 TRREC 1 AALEN 1 699 ID|FBan0033217 SYM|CG33217 GENSR { GSYM|CG33217 ID|FBgn0053217 } ARM|3L SCAF|AE002786 BLOC|23059872..23066052 CLOCC|80D2-80D2 SQLEN|6181 GO|molecular function unknown ; GO:0005554 |cellular component unknown ; GO:0008372 |biological process unknown ; GO:0000004 ID2|FBgn0063058 SYN|BcDNA:RE15216 EST|EC39257 |EK054006 |EK289429 |EK267234 |EK171142 |EP02849 |EK175548 |LD40161 |EK186416 |RE15216 |EK307813 |LD20441 |EK288321 |RE22482 |EK189962 |EK135562 |RE37430 |EK184815 |EK121604 |EK155914 CDNA|RE15216 DT|20031201 TRREC { NAM|CG33217-RA SYN|FlyBase:FBtr0070045 |FlyBase:FBex0070021 |FlyBase Annotation IDs:CG33217:1 |FlyBase:FBex0070020 |FlyBase Annotation IDs:CG33217:2 |FlyBase:FBex0070019 |FlyBase Annotation IDs:CG33217:3 |FlyBase:FBex0070018 |FlyBase Annotation IDs:CG33217:4 |FlyBase:FBex0070017 |FlyBase Annotation IDs:CG33217:5 |FlyBase:FBex0070016 |FlyBase Annotation IDs:CG33217:6 |FlyBase:FBex0070015 |FlyBase Annotation IDs:CG33217:7 |FlyBase:FBex0070014 |FlyBase Annotation IDs:CG33217:8 |FlyBase:FBpp0070044 |GB_protein:AAS64918.1 AANAM|CG33217-PA SQLEN|2223 AALEN|699 BLOC|join(23059872..23059959,23060041..23060241,23060558..23061092, |23061154..23061330,23062101..23062211,23064351..23064495,23065030..23065191, |23065249..23066052) CDS|join(23060049..23060241,23060558..23061092,23061154..23061330, |23062101..23062211,23064351..23064495,23065030..23065191,23065249..23066022) CMT|non_canonical_splice_site=provisional |validation_flag=unusual splice |comment=Unconventional splice site postulated DT|20030618 } EVD { PRG|genscan_masked DB|dummy CLA|genscan_masked DT|20041008 BLOC|join(23060947..23061092,23065302..23066011,23067511..23067713) } EVD { PRG|sim4tandem DB|na_gb.dmel CLA|cDNA DT|20050823 DBX|RE15216 BLOC|join(23059872..23059959,23060041..23060241,23060558..23061092, |23061154..23061330,23062101..23062211,23064351..23064495,23065030..23065195, |23065249..23066052) } EVD { PRG|repeat_runner_seg DB|dummy CLA|repeat_runner_seg DT|20041008 BLOC|23063933..23064254 BLOC|23062240..23063578 } EVD { PRG|repeatmasker DB|dummy CLA|RepeatMasker:dummy DT|20041008 DBX|X01748 BLOC|23063293..23063424 DBX|U66884 BLOC|23063428..23063568 DBX|AC005453 BLOC|23063943..23064206 DBX|U66884 BLOC|23064212..23064244 DBX|X01748 BLOC|23062692..23063278 } EVD { PRG|tblastxwrap_masked DB|na_baylorf1_scfchunk.dpse CLA|so DT|20041008 DBX|Contig4971_Contig7717B.fa-1 BLOC|23060746..23061093 DBX|Contig4971_Contig7717B.fa-1 BLOC|23064292..23064474 DBX|Contig4971_Contig7717B.fa-1 BLOC|23065246..23065494 } EVD { PRG|blastx_masked DB|aa_SPTR.dmel CLA|protein DT|20041008 DBX|Q8MS38 BLOC|join(23064253..23064501,23065030..23065191,23065240..23066022) DBX|Q8MS38 BLOC|join(23060049..23060261,23060545..23061090,23061152..23061331, |23062090..23062212) } EVD { PRG|sim4 DB|na_dbEST.diff.dmel CLA|EST DBX|EC39257.5prime BLOC|23065678..23066052 DBX|EK054006.5prime BLOC|join(23060035..23060241,23060558..23060682) DBX|EK289429.5prime BLOC|23065415..23066008 DBX|EK267234.5prime BLOC|join(23059941..23059959,23060041..23060241,23060558..23060658) DBX|EK171142.5prime BLOC|23064445..23064918 DBX|EP02849.3prime BLOC|23062180..23062622 DBX|EK175548.5prime BLOC|join(23061050..23061092,23061154..23061330,23062101..23062326) DBX|EK186416.5prime BLOC|23060666..23061092 DBX|EK307813.5prime BLOC|23060629..23061096 DBX|EK288321.5prime BLOC|23060629..23060973 DBX|EK189962.5prime BLOC|join(23060097..23060241,23060558..23060575) DBX|EK135562.5prime BLOC|join(23059876..23059959,23060041..23060132) DBX|EK184815.5prime BLOC|join(23060097..23060241,23060558..23060628) DBX|EK121604.5prime BLOC|join(23060912..23061092,23061154..23061330,23062101..23062211, |23064351..23064377) DBX|EK155914.5prime BLOC|join(23060094..23060241,23060558..23060833) } EVD { PRG|promoter DB|dummy CLA|promoter DT|20041008 BLOC|23065120..23065121 BLOC|23063880..23063881 } EVD { PRG|sim4 DB|na_dbEST.same.dmel CLA|EST DBX|LD40161.5prime BLOC|join(23059941..23059959,23060041..23060241,23060558..23060959) DBX|RE15216:contig2 BLOC|23065513..23066049 DBX|RE15216:contig1 BLOC|join(23059872..23059959,23060041..23060241,23060558..23060819) DBX|LD20441.5prime BLOC|join(23059915..23059959,23060041..23060241,23060558..23060947) DBX|RE22482.5prime BLOC|join(23059877..23059959,23060041..23060241,23060558..23060921) DBX|RE37430.5prime BLOC|join(23059872..23059959,23060041..23060174) } EVD { PRG|sim4 DB|na_transcript.dmel.RELEASE32 CLA|mRNA DT|20041008 DBX|CG33217-RA.32 BLOC|join(23059872..23059959,23060041..23060241,23060558..23061092, |23061154..23061330,23062101..23062211,23064351..23064495,23065030..23065195, |23065249..23066052) } VERS|4.3 } # EOR GADR { RETE|ID 1 FBan0017520 GID 1 FBgn0000258 GSYM 1 CkIIalpha CGSYM 1 CG17520 ARM 1 3L CLOC 1 80D1-80D1 SCAF 1 AE002786 TRREC 3 AALEN 3 336 ID|FBan0017520 SYM|CG17520 GENSR { GSYM|CkIIalpha ID|FBgn0000258 } ARM|3L SCAF|AE002786 BLOC|23033421..23037303 CLOCC|80D1-80D1 SQLEN|3883 GO|frizzled signaling pathway ; GO:0007222 |protein amino acid phosphorylation ; GO:0006468 |locomotor rhythm ; GO:0045475 |casein kinase activity ; GO:0004680 |cell proliferation ; GO:0008283 |protein kinase CK2 activity ; GO:0004682 |eye development (sensu Endopterygota) ; GO:0007456 |ATP binding ; GO:0005524 |nucleus ; GO:0005634 |protein kinase activity ; GO:0004672 |circadian rhythm ; GO:0007623 |protein kinase CK2 complex ; GO:0005956 |intracellular signaling cascade ; GO:0007242 |cytosol ; GO:0005829 |receptor signaling protein serine/threonine kinase activity ; GO:0004702 ID2|FBan0017520 |FBgn0062248 SYN|CKIIa |Tik |CK2 |CK2alpha |CK2&agr; |CKIIalpha |CK II |CKII&agr; |dCKII |CK2 alpha |CK-II |casein kinase 2 |DmCKII&agr; |Cask-II-a |CK-2 |CKIIalfa |CKII-&agr; |Casein kinase II |CK-II &agr; EST|RH19214 |RE29742 |RE21670 |RE33349 |RE04120 |LP05067 |RE04052 |LD11113 |LP02330 |LD27706 |RH18365 |EK150156 |EK246046 |EK253747 |EK251421 |EK240707 |EK246945 |EC26020 |SD15912 |EK197306 |EN03502 |GM04859 |EK250410 |EK294247 |GM06353 |BQ103631 |BQ103128 |BQ103410 |BQ102770 |AT15417 |AT08183 |LD01014 |RE11341 |RE46590 CDNA|LD27706 CMT|map=80D2-80D2 |description=D.melanogaster FlyBase-curated sequence: CkIIalpha.v002 |comment=EST data support existence of multiple transcripts due |to variable use of 5' exons DT|20031201 TRREC { NAM|CkIIalpha-RA SYN|FlyBase:FBtr0070042 |FlyBase Annotation IDs:CG17520-RA |FlyBase:FBpp0070041 |GB_protein:AAN11415.1 |FlyBase Annotation IDs:CG17520-PA AANAM|CkIIalpha-PA SQLEN|1598 AALEN|336 BLOC|join(23033421..23033564,23034086..23034198,23035963..23037303) CDS|23036093..23037100 CMT|evidence=experimental |protein_id=AAN11415 DT|20020528 } TRREC { NAM|CkIIalpha-RC SYN|FlyBase:FBtr0070044 |FlyBase Annotation IDs:CG17520-RC |FlyBase:FBpp0070043 |FlyBase Annotation IDs:CG17520-PC |GB_protein:AAN11416.1 AANAM|CkIIalpha-PC SQLEN|1485 AALEN|336 BLOC|join(23033421..23033564,23035963..23037303) CDS|23036093..23037100 CMT|evidence=experimental |protein_id=AAN11416 DT|20020528 } TRREC { NAM|CkIIalpha-RB SYN|FlyBase:FBtr0070043 |FlyBase Annotation IDs:CG17520-RB |FlyBase:FBpp0070042 |FlyBase Annotation IDs:CG17520-PB |GB_protein:AAF45439.1 AANAM|CkIIalpha-PB SQLEN|1621 AALEN|336 BLOC|join(23033421..23033564,23034061..23034198,23035963..23037301) CDS|23036093..23037100 CMT|protein_id=AAF45439 |evidence=experimental DT|20020528 } CLNSR { CLA|point_mutation NAM|CkII&agr;[Tik]-2 BLOC|23036587..23036587 CMT|comment=One of two amino acid substitutions observed in mutant. Site of nucleotide substitution in mutant inferred by FlyBase based on reported amino acid change. |evidence=experimental |reported_pr_change=E165D |pr_change=E165D|CkIIalpha-PB, |E165D|CkIIalpha-PA,E165D|Ck IIalpha-PC |na_change=A23036587Y DT|20060120 } CLNSR { CLA|sequence_variant NAM|CkII&agr;[TikR] BLOC|23036792..23036818 CMT|comment=27bp deletion coupled to a 6bp in-frame insertion, resulting in a deletion of 7 amino acids (234-240) and an amino acid replacement (R242E). @CkII&agr; |[TikR]@ also contains same two amino acid replacements as in @CkII&agr;[Tik]@. |evidence=experimental DT|20060120 } CLNSR { CLA|point_mutation NAM|CkII&agr;[Tik]-1 BLOC|23036574..23036574 CMT|pr_change=M161K|CkIIalpha-PB,M161K|CkIIalpha-PA,M161K|Ck IIalpha-PC |na_change=T23036574A |reported_pr_change=M161K |comment=One of two amino acid substitutions observed in mutant. |Site of nucleotide substitution in mutant inferred by FlyBase |based on reported amino acid change. |evidence=experimental DT|20060120 } EVD { PRG|blastx_masked DB|aa_SPTR.othinv CLA|protein DT|20041008 DBX|Q9NL95 BLOC|23036093..23037079 DBX|Q8T3S5 BLOC|23036093..23037079 DBX|Q7Q707 BLOC|23036090..23037088 } EVD { PRG|sim4 DB|na_gadfly.dros.RELEASE2 CLA|mRNA DT|20041008 DBX|CT38735.2 BLOC|join(23033532..23033564,23034061..23034198,23035963..23037301) } EVD { PRG|tblastx_masked DB|na_dbEST.insect CLA|EST DBX|AV401503 BLOC|join(23036234..23036980,23036981..23037043) DBX|BM608540 BLOC|23036090..23036671 DBX|AU002947 BLOC|join(23036093..23036683,23036681..23036743) } EVD { PRG|tblastxwrap_masked DB|na_scf_chunk_agambiae.fa CLA|DNA DT|20041008 DBX|AAAB01008960.1p34 BLOC|23036090..23037088 } EVD { PRG|sim4 DB|na_dbEST.same.dmel CLA|EST DBX|RH19214.5prime BLOC|join(23033453..23033564,23034086..23034198,23035963..23036181) DBX|RE29742.5prime BLOC|join(23033516..23033564,23034086..23034198,23035963..23036349) DBX|RE21670.5prime BLOC|join(23033507..23033564,23035963..23036564) DBX|RE33349.5prime BLOC|join(23033484..23033564,23034086..23034198,23035963..23036312) DBX|RE04120.5prime BLOC|join(23033509..23033564,23034086..23034198,23035963..23036302) DBX|LP05067.5prime BLOC|join(23033521..23033564,23034061..23034198,23035963..23036381) DBX|RE04052.5prime BLOC|join(23034086..23034198,23035963..23036311) DBX|LD11113.5prime BLOC|join(23034086..23034198,23035963..23036251) DBX|LP02330.5prime BLOC|join(23033521..23033564,23034061..23034198,23035963..23036398) DBX|LD27706:contig2 BLOC|23036623..23037263 DBX|LD27706:contig1 BLOC|join(23034086..23034198,23035963..23036472) DBX|RH18365.5prime BLOC|join(23033453..23033564,23034086..23034198,23035963..23036221) DBX|LD01014.3prime BLOC|23036696..23037177 DBX|RE11341.5prime BLOC|join(23033507..23033564,23035963..23036390) DBX|RE46590.5prime BLOC|23033503..23034007 } EVD { PRG|prosplign DB|aa_ncbi_other CLA|protein DT|20060123 DBX|BAD91393 BLOC|23036093..23037082 } EVD { PRG|sim4 DB|na_transcript.dmel.RELEASE32 CLA|mRNA DT|20041008 DBX|CG17520-RA.32 BLOC|join(23033421..23033564,23034086..23034198,23035963..23037303) DBX|CG17520-RB.32 BLOC|join(23033421..23033564,23034061..23034198,23035963..23037301) DBX|CG17520-RC.32 BLOC|join(23033421..23033564,23035963..23037303) } EVD { PRG|sim4 DB|na_transcript.dmel.RELEASE31 CLA|mRNA DT|20041008 DBX|CG17520-RC.31 BLOC|join(23033421..23033564,23035963..23037303) DBX|CG17520-RB.31 BLOC|join(23033421..23033564,23034061..23034198,23035963..23037301) DBX|CG17520-RA.31 BLOC|join(23033421..23033564,23034086..23034198,23035963..23037303) } EVD { PRG|sim4tandem DB|na_gb.dmel CLA|cDNA DT|20050823 DBX|M16534 BLOC|join(23034086..23034198,23035963..23037301) DBX|LD27706 BLOC|join(23034086..23034198,23035963..23037302) } EVD { PRG|genscan_masked DB|dummy CLA|genscan_masked DT|20041008 BLOC|23036093..23037103 } EVD { PRG|blastx_masked DB|aa_SPTR.insect CLA|protein DT|20041008 DBX|Q8WQT1 BLOC|23036357..23037094 DBX|Q8WP82 BLOC|23036357..23037094 DBX|O76484 BLOC|23036093..23037094 } EVD { PRG|blastx_masked DB|aa_SPTR.rodent CLA|protein DT|20041008 DBX|AAH60742 BLOC|23036099..23037079 DBX|Q61177 BLOC|23036099..23037079 DBX|Q8R0X4 BLOC|23036099..23037079 } EVD { PRG|repeat_runner_seg DB|dummy CLA|repeat_runner_seg DT|20041008 BLOC|23036410..23036852 } EVD { PRG|tblastxwrap_masked DB|na_baylorf1_scfchunk.dpse CLA|so DT|20041008 DBX|Contig3286_Contig7811B.fa-1 BLOC|23036084..23037100 DBX|Contig1006_Contig943-12 BLOC|23036414..23036626 DBX|Contig2138_Contig8242-1 BLOC|23036414..23036638 DBX|Contig1421_Contig5350-2 BLOC|23036483..23036848 DBX|Contig1421_Contig5350-1 BLOC|23036483..23036848 DBX|Contig6780_Contig1402-1 BLOC|23036594..23036764 } EVD { PRG|blastx_masked DB|aa_SPTR.othvert CLA|protein DT|20041008 DBX|P33674 BLOC|23036099..23037079 DBX|P28020 BLOC|23036099..23037079 DBX|P21868 BLOC|23036099..23037079 } EVD { PRG|sim4 DB|na_dbEST.diff.dmel CLA|EST DBX|EK150156.5prime BLOC|23037044..23037429 DBX|EK246046.5prime BLOC|23037036..23037450 DBX|EK253747.5prime BLOC|23036977..23037415 DBX|EK251421.5prime BLOC|23036856..23037331 DBX|EK240707.5prime BLOC|23036856..23037054 DBX|EK246945.5prime BLOC|23036531..23036940 DBX|EC26020.5prime BLOC|23036347..23036927 DBX|SD15912.5prime BLOC|23036326..23037015 DBX|EK197306.5prime BLOC|23036303..23036721 DBX|EN03502.5prime BLOC|23036089..23036592 DBX|GM04859.5prime BLOC|23035963..23036433 DBX|EK250410.5prime BLOC|23034761..23035388 DBX|EK294247.5prime BLOC|23034536..23035102 DBX|GM06353.5prime BLOC|join(23034086..23034198,23035963..23036358) DBX|BQ103631 BLOC|join(23034084..23034198,23035963..23036226) DBX|BQ103128 BLOC|join(23034084..23034198,23035963..23036329) DBX|BQ103410 BLOC|join(23033518..23033564,23034086..23034198,23035963..23036318) DBX|BQ102770 BLOC|join(23033509..23033564,23034061..23034198,23035963..23036203) DBX|AT15417.5prime BLOC|join(23033477..23033564,23035963..23036413) DBX|AT08183.5prime BLOC|join(23033421..23033564,23035963..23036336) } EVD { PRG|blastx_masked DB|aa_SPTR.dmel CLA|protein DT|20041008 DBX|Q9W354 BLOC|23036210..23037055 DBX|Q9VD82 BLOC|23036201..23037067 DBX|Q86FT6 BLOC|23036195..23037058 DBX|Q94888 BLOC|23036183..23037058 DBX|Q86FT7 BLOC|23036195..23037058 DBX|P23572 BLOC|23036195..23037058 DBX|Q86FT5 BLOC|23036195..23037058 DBX|Q8IRC9 BLOC|23036183..23037058 DBX|Q9XTK9 BLOC|23036183..23037058 DBX|Q86FT9 BLOC|23036195..23037058 DBX|Q94877 BLOC|23036186..23037058 DBX|Q9VZN8 BLOC|23036183..23037058 DBX|O61443 BLOC|23036180..23037055 DBX|AAL49292 BLOC|23036180..23037055 DBX|P48609 BLOC|23036201..23037058 DBX|P23573 BLOC|23036195..23037058 DBX|Q9V7R5 BLOC|23036186..23037058 DBX|Q8MZ44 BLOC|23036183..23037058 DBX|O62618 BLOC|23036180..23037055 DBX|Q8T473 BLOC|23036162..23036782 DBX|P08181 BLOC|23036096..23037100 DBX|AAL39698 BLOC|23036093..23037100 DBX|P92208 BLOC|23036417..23037055 DBX|P18431 BLOC|23036417..23037058 DBX|Q9VP22 BLOC|23036417..23037097 DBX|Q9VPC0 BLOC|23036195..23037088 DBX|Q8T9E1 BLOC|23036417..23037097 DBX|Q9VGP9 BLOC|23036162..23036791 DBX|O17432 BLOC|23036480..23037058 DBX|Q9VL64 BLOC|23036363..23037058 DBX|Q23993 BLOC|23036462..23037055 DBX|Q23994 BLOC|23036462..23037055 DBX|Q8IQ91 BLOC|23036462..23037055 DBX|Q8T030 BLOC|23036462..23037055 DBX|P83101 BLOC|23036462..23037058 DBX|Q7PL59 BLOC|23036363..23036839 DBX|O17049 BLOC|23036201..23036782 DBX|Q8MQR7 BLOC|23036195..23037088 DBX|Q9VGQ0 BLOC|23036162..23036782 DBX|P49657 BLOC|join(23036159..23036254,23036420..23036866) DBX|Q95SE1 BLOC|23036417..23037097 DBX|Q24216 BLOC|23036363..23037058 DBX|Q9V3D5 BLOC|23036201..23037064 DBX|Q9VMN3 BLOC|23036195..23037058 DBX|P83100 BLOC|23036183..23037070 DBX|Q86FT8 BLOC|23036195..23037058 DBX|AAL48618 BLOC|23036363..23037055 DBX|P40417 BLOC|23036363..23037055 DBX|Q9VK37 BLOC|23036219..23036890 DBX|Q9VT57 BLOC|23036216..23037058 } EVD { PRG|blastx_masked DB|aa_SPTR.worm CLA|protein DT|20041008 DBX|P34556 BLOC|23036195..23037058 DBX|P18334 BLOC|23036099..23037100 DBX|P46551 BLOC|23036189..23037088 } EVD { PRG|blastx_masked DB|aa_SPTR.plant CLA|protein DT|20041008 DBX|Q8H386 BLOC|23036105..23037067 DBX|Q9AR27 BLOC|23036105..23037067 DBX|Q9ZR52 BLOC|23036105..23037067 } EVD { PRG|blastx_masked DB|aa_SPTR.primate CLA|protein DT|20041008 DBX|Q00526 BLOC|23036195..23037058 DBX|Q8NEV1 BLOC|23036099..23037079 DBX|P19784 BLOC|23036105..23037088 } EVD { PRG|promoter DB|dummy CLA|promoter DT|20041008 BLOC|23034566..23034567 } EVD { PRG|blastx_masked DB|aa_SPTR.yeast CLA|protein DT|20041008 DBX|P00546 BLOC|23036186..23037058 DBX|P19454 BLOC|23036105..23037058 DBX|P15790 BLOC|join(23036105..23036263,23036354..23037067) } VERS|4.3 } # EOR GADR { RETE|ID 1 FBan0017521 GID 1 FBgn0024733 GSYM 1 Qm CGSYM 1 CG17521 ARM 1 3L CLOC 1 80D1-80D1 SCAF 1 AE002786 TRREC 2 AALEN 2 218 ID|FBan0017521 SYM|CG17521 GENSR { GSYM|Qm ID|FBgn0024733 } ARM|3L SCAF|AE002786 BLOC|complement(23027471..23029315) CLOCC|80D1-80D1 SQLEN|1845 GO|structural constituent of ribosome ; GO:0003735 |cytosolic large ribosomal subunit (sensu Eukaryota) ; GO:0005842 |ribosome ; GO:0005840 |nucleic acid binding ; GO:0003676 |protein biosynthesis ; GO:0006412 ID2|FBan0017521 |FBgn0026279 |FBgn0064923 SYN|anon-EST:Posey179 |BcDNA:LD24589 |RpL10 |Ribosome RL10 |DQM EST|LD08893 |GH22431 |LP03226 |LP05913 |SD24396 |EN04726 |EN02356 |GM21651 |GM20138 |GM17619 |SD13002 |EC28109 |EC34935 |EC22953 |LD32238 |LD16656 |SD19669 |LD14759 |SD24921 |LP19557 |EC01546 |LP16843 |EC28062 |LP15270 |SD18126 |LD40660 |BQ103251 |LD46531 |EN13435 |LD36922 |EK165207 |GH24748 |EK122146 |EC33630 |UT01726 |GM32043 |GM31237 |GM30438 |GM25764 |SD14377 |GM04627 |EK186029 |GM27775 |GM21119 |GH24340 |GH23111 |EK278150 |GH22756 |EC39663 |GH22739 |EC33457 |GH22274 |BQ103670 |GH22209 |ESG014a |GH21967 |EC35553 |GH21429 |EK063248 |LP11927 |EP19103 |LP10929 |EK141826 |EC33461 |SD11179 |SD17543 |EN15055 |GM08960 |AT16527 |SD14788 |SD12304 |GM17390 |GM19648 |GM24257 |LP10885 |LP08280 |EC37319 |LP07567 |EC26319 |LP06757 |GM28635 |LP02325 |EK245501 |LP05510 |EC28053 |GH12775 |EK203818 |GH11788 |SD12842 |RE50246 |SD20359 |RE13849 |ESG014d |EN05362 |GM32306 |SD27453 |SD28185 |SD16713 |SD23180 |SD22436 |SD23910 |SD09663 |EN02937 |EN03320 |RE41894 |RE20819 |GH18426 |RE01133 |GH15096 |LD18303 |LP17357 |GH04719 |LD28356 |LD31419 |LD29386 |RE57794 |LD28684 |RE32601 |LP12815 |LD24589 |LP12714 |GH02638 |LP23576 |LP06950 |EN04214 |EC14422 |EC26169 |EC30766 |EC32286 |EC43876 |EN10063 |EN11760 |EN11951 |EN12516 |RE54885 |RH36227 |LP04384 |GH02487 |LD45265 |GH07778 |GH15628 |LP04110 |GH22731 |LP21658 |LD06530 |GH10847 |GH04073 |GH13509 |RH56575 |RH21733 |RH69305 |RH30661 |RH66165 |RH53802 |RH05162 |RH04570 |RH04512 |RE73760 |RE72747 |RE70853 |RH02792 |RH01944 |RH01385 |RE70694 |GM01094 |SD15631 |GM27196 |GM28247 |SD17564 |SD20057 |BQ103393 |ESG011b |RE68647 |UT01965 |RE67235 |GM01741 |RE65710 |RE60824 |RE56966 |RE55803 |RE51336 |RE51321 |RE47446 |RE35274 |EN04359 |EC37517 |EC26517 |GM02378 |SD27195 |BQ103505 |EK091334 |EN13230 |GM07854 |EC28471 |EC38864 |RE34942 |GM30929 |RE32703 |SD01338 |RE30554 |RE29979 |RE02750 |RE01176 CDNA|LD24589 |RE02339 DT|20031201 TRREC { NAM|Qm-RB SYN|FlyBase:FBtr0070048 |FlyBase Annotation IDs:CG17521-RB |FlyBase:FBpp0070047 |FlyBase Annotation IDs:CG17521-PB |GB_protein:AAG22453.2 AANAM|Qm-PB SQLEN|798 (-) AALEN|218 BLOC|complement(23027471..23027719,23028525..23028687,23028747..23029052, |23029116..23029146,23029267..23029315) CDS|complement(23027558..23027719,23028525..23028687,23028747..23029052, |23029116..23029138) CMT|non_canonical_splice_site=provisional |validation_flag=unusual splice |protein_id=AAG22453 DT|20021004 } TRREC { NAM|Qm-RA SYN|FlyBase:FBtr0070047 |FlyBase Annotation IDs:CG17521-RA |FlyBase:FBpp0070046 |FlyBase Annotation IDs:CG17521-PA |GB_protein:AAF45440.1 |FlyBase:FBgn0074566 |FlyBase Annotation IDs:GA14538 |Dpse\GA14538 AANAM|Qm-PA SQLEN|787 (-) AALEN|218 BLOC|complement(23027471..23027719,23028525..23028687,23028747..23029052, |23029116..23029146,23029278..23029315) CDS|complement(23027558..23027719,23028525..23028687,23028747..23029052, |23029116..23029138) CMT|comment=GC splice donor site postulated |non_canonical_splice_site=provisional |validation_flag=unusual splice |protein_id=AAF45440 |comment=Range of putative ortholog from tblastn was extended |to cover the gene prediction DT|20021004 } EVD { PRG|blastx_masked DB|aa_SPTR.othinv CLA|protein DT|20041008 DBX|Q86LY1 BLOC|complement(23028513..23028689,23028746..23029042) DBX|Q86E46 BLOC|complement(23028513..23028689,23028746..23029051) DBX|Q86QS5 BLOC|complement(23027579..23027719,23028513..23028689,23028746..23029051) } EVD { PRG|sim4 DB|na_gadfly.dros.RELEASE2 CLA|mRNA DT|20041008 DBX|CT38737.2 BLOC|complement(23027476..23027719,23028525..23028687,23028747..23029052, |23029116..23029146,23029267..23029310) DBX|CT43439.2 BLOC|complement(23027476..23027719,23028525..23028687,23028747..23028773, |23028855..23029052,23029116..23029148) DBX|CT43437.2 BLOC|complement(23027476..23027719,23028525..23028687,23028747..23028806) } EVD { PRG|tblastx_masked DB|na_dbEST.insect CLA|EST DBX|BM632267 BLOC|complement(23027567..23027719,23027679..23027720,23028513..23028689, |23028746..23029129) DBX|BX606991 BLOC|complement(23027567..23027719,23027679..23027720,23028513..23028689, |23028746..23029051) DBX|BP121978 BLOC|complement(23028513..23028689,23028746..23029063) } EVD { PRG|tblastxwrap_masked DB|na_scf_chunk_agambiae.fa CLA|DNA DT|20041008 DBX|AAAB01008811.1p11 BLOC|complement(23027567..23027719) DBX|AAAB01008859.1p107 BLOC|complement(23027567..23027719) DBX|AAAB01008859.1p107 BLOC|complement(23028513..23028689) DBX|AAAB01008811.1p11 BLOC|complement(23028513..23028689) DBX|AAAB01008859.1p107 BLOC|complement(23028746..23029051) DBX|AAAB01008811.1p11 BLOC|complement(23028746..23029054) } EVD { PRG|sim4 DB|na_dbEST.same.dmel CLA|EST DBX|LD08893.5prime BLOC|complement(23027584..23027719,23028525..23028687,23028747..23029052, |23029116..23029147) DBX|GH22431.5prime BLOC|complement(23027543..23027719,23028525..23028687,23028747..23029052, |23029116..23029147) DBX|LP03226.5prime BLOC|complement(23027556..23027719,23028525..23028687,23028747..23029052, |23029116..23029147) DBX|LP05913.5prime BLOC|complement(23027577..23027719,23028525..23028687,23028747..23029052, |23029116..23029147) DBX|LD32238.5prime BLOC|complement(23027477..23027719,23028525..23028687,23028747..23029052, |23029116..23029147) DBX|LD16656.5prime BLOC|complement(23027534..23027719,23028525..23028687,23028747..23029052, |23029116..23029148) DBX|LD14759.5prime BLOC|complement(23027534..23027719,23028525..23028687,23028747..23029052, |23029116..23029148) DBX|LP19557.5prime BLOC|complement(23027526..23027719,23028525..23028687,23028747..23029052, |23029116..23029148) DBX|LP16843.5prime BLOC|complement(23027610..23027719,23028525..23028687,23028747..23029052, |23029116..23029148) DBX|LP15270.5prime BLOC|complement(23027531..23027719,23028525..23028687,23028747..23029052, |23029116..23029148) DBX|LD40660.5prime BLOC|complement(23027615..23027719,23028525..23028687,23028747..23029052, |23029116..23029148) DBX|LD46531.5prime BLOC|complement(23027612..23027719,23028525..23028687,23028747..23029052, |23029116..23029148) DBX|LD36922.5prime BLOC|complement(23027616..23027719,23028525..23028687,23028747..23029052, |23029116..23029148) DBX|GH24748.5prime BLOC|complement(23027614..23027719,23028525..23028687,23028747..23029052, |23029116..23029148) DBX|GH24340.5prime BLOC|complement(23027614..23027719,23028525..23028687,23028747..23029052, |23029116..23029148) DBX|GH23111.5prime BLOC|complement(23027616..23027719,23028525..23028687,23028747..23029052, |23029116..23029148) DBX|GH22756.5prime BLOC|complement(23027527..23027719,23028525..23028687,23028747..23029052, |23029116..23029148) DBX|GH22739.5prime BLOC|complement(23027614..23027719,23028525..23028687,23028747..23029052, |23029116..23029148) DBX|GH22274.5prime BLOC|complement(23027612..23027719,23028525..23028687,23028747..23029052, |23029116..23029148) DBX|GH22209.5prime BLOC|complement(23027596..23027719,23028525..23028687,23028747..23029052, |23029116..23029148) DBX|GH21967.5prime BLOC|complement(23027598..23027719,23028525..23028687,23028747..23029052, |23029116..23029148) DBX|GH21429.5prime BLOC|complement(23027603..23027719,23028525..23028687,23028747..23029052, |23029116..23029148) DBX|LP11927.5prime BLOC|complement(23027596..23027719,23028525..23028687,23028747..23029052, |23029116..23029148) DBX|LP10929.5prime BLOC|complement(23027614..23027719,23028525..23028687,23028747..23029052, |23029116..23029148) DBX|LP10885.5prime BLOC|complement(23027614..23027719,23028525..23028687,23028747..23029052, |23029116..23029148) DBX|LP08280.5prime BLOC|complement(23027565..23027719,23028525..23028687,23028747..23029052, |23029116..23029148) DBX|LP07567.5prime BLOC|complement(23027543..23027719,23028525..23028687,23028747..23029052, |23029116..23029148) DBX|LP06757.5prime BLOC|complement(23027516..23027719,23028525..23028687,23028747..23029052, |23029116..23029148) DBX|LP02325.5prime BLOC|complement(23027613..23027719,23028525..23028687,23028747..23029052, |23029116..23029148) DBX|LP05510.5prime BLOC|complement(23027594..23027719,23028525..23028687,23028747..23029052, |23029116..23029148) DBX|GH12775.5prime BLOC|complement(23027602..23027719,23028525..23028687,23028747..23029052, |23029116..23029148) DBX|GH11788.5prime BLOC|complement(23027594..23027719,23028525..23028687,23028747..23029052, |23029116..23029148) DBX|RE50246.5prime BLOC|complement(23027586..23027719,23028525..23028687,23028747..23029052, |23029116..23029146,23029278..23029305) DBX|RE13849.5prime BLOC|complement(23027612..23027719,23028525..23028687,23028747..23029052, |23029116..23029146,23029278..23029305) DBX|RE41894.5prime BLOC|complement(23027613..23027719,23028525..23028687,23028747..23029052, |23029116..23029146,23029278..23029306) DBX|RE20819.5prime BLOC|complement(23027584..23027719,23028525..23028687,23028747..23029052, |23029116..23029146,23029278..23029306) DBX|GH18426.3prime BLOC|complement(23027505..23027719,23028525..23028687,23028747..23028965) DBX|RE01133:contig1 BLOC|complement(23028539..23028687,23028747..23029052,23029116..23029146, |23029278..23029310) DBX|RE01133:contig2 BLOC|complement(23027479..23027715) DBX|GH15096.5prime BLOC|complement(23027487..23027719,23028525..23028687,23028747..23028987) DBX|LD18303.3prime BLOC|complement(23027505..23027701) DBX|LP17357.3prime BLOC|complement(23027512..23027719,23028525..23028687,23028747..23029032) DBX|GH04719.5prime BLOC|complement(23027548..23027719,23028525..23028687,23028747..23029052, |23029116..23029148) DBX|LD28356.5prime BLOC|complement(23027476..23027719,23028525..23028687,23028747..23029052, |23029116..23029133) DBX|LD31419.5prime BLOC|complement(23027475..23027719,23028525..23028687,23028747..23029052, |23029116..23029148) DBX|LD29386.5prime BLOC|complement(23027507..23027719,23028525..23028687,23028747..23029052, |23029116..23029134) DBX|RE57794.5prime BLOC|complement(23027586..23027719,23028525..23028687,23028747..23029052, |23029116..23029148) DBX|LD28684.5prime BLOC|complement(23027476..23027719,23028525..23028687,23028747..23029052, |23029116..23029134) DBX|RE32601.5prime BLOC|complement(23027614..23027719,23028525..23028687,23028747..23029052, |23029116..23029148) DBX|LP12815.5prime BLOC|complement(23027530..23027719,23028525..23028687,23028747..23029052, |23029116..23029139) DBX|LD24589.5prime BLOC|complement(23027524..23027719,23028525..23028687,23028747..23028773, |23028855..23029052,23029116..23029148) DBX|LP12714.5prime BLOC|complement(23027500..23027719,23028525..23028687,23028747..23029052, |23029116..23029139) DBX|GH02638.5prime BLOC|complement(23027598..23027719,23028525..23028687,23028747..23029052, |23029116..23029146,23029267..23029286) DBX|LP23576.5prime BLOC|complement(23027586..23027719,23028525..23028687,23028747..23029052, |23029116..23029140) DBX|LP06950.5prime BLOC|complement(23027581..23027719,23028525..23028687,23028747..23029052, |23029116..23029142) DBX|RE54885.5prime BLOC|complement(23027541..23027719,23028525..23028687,23028747..23029052, |23029116..23029146,23029278..23029299) DBX|RH36227.5prime BLOC|complement(23027619..23027719,23028525..23028687,23028747..23029052, |23029116..23029146,23029278..23029305) DBX|LP04384.5prime BLOC|complement(23027582..23027719,23028525..23028687,23028747..23029052, |23029116..23029142) DBX|GH02487.5prime BLOC|complement(23027529..23027719,23028525..23028687,23028747..23029052, |23029116..23029148) DBX|LD45265.5prime BLOC|complement(23027594..23027719,23028525..23028687,23028747..23029052, |23029116..23029143) DBX|GH07778.5prime BLOC|complement(23027619..23027719,23028525..23028687,23028747..23029052, |23029116..23029148) DBX|GH15628.5prime BLOC|complement(23027624..23027719,23028525..23028687,23028747..23029052, |23029116..23029143) DBX|LP04110.5prime BLOC|complement(23027516..23027719,23028525..23028687,23028747..23028961) DBX|GH22731.5prime BLOC|complement(23027577..23027719,23028525..23028687,23028747..23029052, |23029116..23029145) DBX|LP21658.3prime BLOC|complement(23027477..23027719,23028525..23028687,23028747..23028935) DBX|LD06530.5prime BLOC|complement(23027496..23027719,23028525..23028687,23028747..23029052, |23029116..23029146) DBX|GH10847.3prime BLOC|complement(23027501..23027719,23028525..23028687,23028747..23028918) DBX|GH04073.5prime BLOC|complement(23027604..23027719,23028525..23028687,23028747..23029052, |23029116..23029146) DBX|GH13509.3prime BLOC|complement(23027501..23027719,23028525..23028687,23028747..23028833) DBX|RH56575.5prime BLOC|complement(23027606..23027719,23028525..23028687,23028747..23029052, |23029116..23029146) DBX|RH21733.5prime BLOC|complement(23027472..23027719,23028525..23028581) DBX|RH69305.5prime BLOC|complement(23027613..23027719,23028525..23028687,23028747..23029052, |23029116..23029146) DBX|RH30661.5prime BLOC|complement(23027470..23027719,23028525..23028581) DBX|RH66165.5prime BLOC|complement(23027577..23027719,23028525..23028687,23028747..23029052, |23029116..23029146) DBX|RH53802.5prime BLOC|complement(23027623..23027719,23028525..23028687,23028747..23029052, |23029116..23029146) DBX|RH05162.5prime BLOC|complement(23027477..23027719,23028525..23028565,23028664..23028687, |23028747..23029052,23029116..23029146) DBX|RH04570.5prime BLOC|complement(23027514..23027719,23028525..23028565,23028664..23028687, |23028747..23029052,23029116..23029146) DBX|RH04512.5prime BLOC|complement(23027514..23027719,23028525..23028565,23028664..23028687, |23028747..23029052,23029116..23029146) DBX|RE73760.5prime BLOC|complement(23027574..23027719,23028525..23028687,23028747..23029052, |23029116..23029146) DBX|RE72747.5prime BLOC|complement(23027612..23027719,23028525..23028687,23028747..23029052, |23029116..23029146) DBX|RE70853.5prime BLOC|complement(23027596..23027719,23028525..23028687,23028747..23029052, |23029116..23029146) DBX|RH02792.5prime BLOC|complement(23027624..23027719,23028525..23028687,23028747..23029052, |23029116..23029146) DBX|RH01944.5prime BLOC|complement(23027582..23027719,23028525..23028687,23028747..23029052, |23029116..23029146) DBX|RH01385:contig1 BLOC|complement(23027479..23027719,23028525..23028687,23028747..23029052, |23029116..23029146) DBX|RE70694.5prime BLOC|complement(23027541..23027719,23028525..23028687,23028747..23029052, |23029116..23029146) DBX|RE68647.5prime BLOC|complement(23027617..23027719,23028525..23028687,23028747..23029052, |23029116..23029146) DBX|RE67235.5prime BLOC|complement(23027581..23027719,23028525..23028687,23028747..23029052, |23029116..23029146) DBX|RE65710.5prime BLOC|complement(23027588..23027719,23028525..23028687,23028747..23029052, |23029116..23029146) DBX|RE60824.5prime BLOC|complement(23027548..23027719,23028525..23028687,23028747..23029052, |23029116..23029146) DBX|RE56966.5prime BLOC|complement(23027584..23027719,23028525..23028687,23028747..23029052, |23029116..23029146) DBX|RE55803.5prime BLOC|complement(23027615..23027719,23028525..23028687,23028747..23029052, |23029116..23029146) DBX|RE51336.5prime BLOC|complement(23027616..23027719,23028525..23028687,23028747..23029052, |23029116..23029146) DBX|RE51321.5prime BLOC|complement(23027593..23027719,23028525..23028687,23028747..23029052, |23029116..23029146) DBX|RE47446.5prime BLOC|complement(23027613..23027719,23028525..23028687,23028747..23029052, |23029116..23029146) DBX|RE35274.5prime BLOC|complement(23027594..23027719,23028525..23028687,23028747..23029052, |23029116..23029146) DBX|RE34942.5prime BLOC|complement(23027578..23027719,23028525..23028687,23028747..23029052, |23029116..23029146) DBX|RE32703.5prime BLOC|complement(23027584..23027719,23028525..23028687,23028747..23029052, |23029116..23029146) DBX|RE30554.5prime BLOC|complement(23027587..23027719,23028525..23028687,23028747..23029052, |23029116..23029146) DBX|RE29979.5prime BLOC|complement(23027596..23027719,23028525..23028687,23028747..23029052, |23029116..23029146) DBX|RE02750.5prime BLOC|complement(23027584..23027719,23028525..23028687,23028747..23029052, |23029116..23029146) DBX|RE01176:contig1 BLOC|complement(23027471..23027719,23028525..23028687,23028747..23029052, |23029116..23029146) } EVD { PRG|prosplign DB|aa_ncbi_other CLA|protein DT|20060123 DBX|AAV34820 BLOC|complement(23027564..23027719,23028525..23028687,23028747..23029052, |23029116..23029138) DBX|AAX62400 BLOC|complement(23027558..23027719,23028525..23028687,23028747..23029052, |23029116..23029138) DBX|BAD26683 BLOC|complement(23027558..23027719,23028525..23028687,23028747..23029052, |23029116..23029138) DBX|CAJ17252 BLOC|complement(23027558..23027719,23028525..23028687,23028747..23029052, |23029116..23029138) DBX|CAJ17253 BLOC|complement(23027567..23027719,23028525..23028687,23028747..23029048) DBX|CAJ17254 BLOC|complement(23027558..23027719,23028525..23028677) DBX|CAJ17255 BLOC|complement(23027558..23027719,23028525..23028687,23028747..23029052, |23029116..23029138) } EVD { PRG|sim4 DB|na_transcript.dmel.RELEASE32 CLA|mRNA DT|20041008 DBX|CG17521-RA.32 BLOC|complement(23027471..23027719,23028525..23028687,23028747..23029052, |23029116..23029146,23029278..23029315) DBX|CG17521-RB.32 BLOC|complement(23027471..23027719,23028525..23028687,23028747..23029052, |23029116..23029146,23029267..23029315) } EVD { PRG|sim4 DB|na_transcript.dmel.RELEASE31 CLA|mRNA DT|20041008 DBX|CG17521-RB.31 BLOC|complement(23027471..23027719,23028525..23028687,23028747..23029052, |23029116..23029146,23029267..23029315) DBX|CG17521-RA.31 BLOC|complement(23027471..23027719,23028525..23028687,23028747..23029052, |23029116..23029146,23029278..23029315) } EVD { PRG|sim4tandem DB|na_gb.dmel CLA|cDNA DT|20050823 DBX|LD24589 BLOC|complement(23027467..23027719,23028525..23028687,23028747..23028773, |23028855..23029052,23029116..23029148) DBX|U49721 BLOC|complement(23027500..23027719,23028525..23028687,23028747..23029052, |23029116..23029146,23029278..23029302) DBX|RE02339 BLOC|complement(23027497..23027719,23028525..23028687,23028747..23029052, |23029116..23029146,23029278..23029310) } EVD { PRG|genscan_masked DB|dummy CLA|genscan_masked DT|20041008 BLOC|complement(23027555..23027719,23028576..23028687,23028747..23029052, |23029116..23029146,23029278..23029356) } EVD { PRG|blastx_masked DB|aa_SPTR.insect CLA|protein DT|20041008 DBX|Q7PQZ6 BLOC|complement(23027567..23027719,23028513..23028689,23028746..23029051) DBX|AAR09818 BLOC|complement(23027558..23027719,23028513..23028689,23028746..23029051) DBX|AAR10100 BLOC|complement(23028513..23028689,23028746..23029051) } EVD { PRG|blastx_masked DB|aa_SPTR.rodent CLA|protein DT|20041008 DBX|AAH24901 BLOC|complement(23028513..23028689,23028746..23029051) DBX|AAH48872 BLOC|complement(23028513..23028689,23028746..23029051) DBX|BAB27339 BLOC|complement(23028513..23028689,23028746..23029051) } EVD { PRG|tblastxwrap_masked DB|na_baylorf1_scfchunk.dpse CLA|so DT|20041008 DBX|Contig4971_Contig7717B.fa-1 BLOC|complement(23027561..23027719) DBX|Contig4971_Contig7717B.fa-1 BLOC|complement(23028525..23028701) DBX|Contig4971_Contig7717B.fa-1 BLOC|complement(23028746..23029069) } EVD { PRG|blastx_masked DB|aa_SPTR.othvert CLA|protein DT|20041008 DBX|Q7ZXK4 BLOC|complement(23028513..23028689,23028746..23029051) DBX|Q7ZV96 BLOC|complement(23028513..23028689,23028746..23029051) DBX|Q90YV9 BLOC|complement(23028513..23028689,23028746..23029051) } EVD { PRG|sim4 DB|na_dbEST.diff.dmel CLA|EST DBX|SD24396.5prime BLOC|complement(23027511..23027719,23028525..23028687,23028747..23029052, |23029116..23029140) DBX|EN04726.5prime BLOC|complement(23028621..23028687,23028747..23029052,23029116..23029138) DBX|EN02356.5prime BLOC|complement(23028569..23028687,23028747..23029052,23029116..23029143) DBX|GM21651.5prime BLOC|complement(23027604..23027719,23028525..23028687,23028747..23029052, |23029116..23029143) DBX|GM20138.5prime BLOC|complement(23027614..23027719,23028525..23028687,23028747..23029052, |23029116..23029143) DBX|GM17619.5prime BLOC|complement(23027632..23027719,23028525..23028687,23028747..23029052, |23029116..23029143) DBX|SD13002.5prime BLOC|complement(23028580..23028687,23028747..23029052,23029116..23029143) DBX|EC28109.5prime BLOC|complement(23028599..23028687,23028747..23029052,23029116..23029144) DBX|EC34935.5prime BLOC|complement(23028565..23028687,23028747..23029052,23029116..23029145) DBX|EC22953.5prime BLOC|complement(23028563..23028687,23028747..23029052,23029116..23029145) DBX|SD19669.5prime BLOC|complement(23027548..23027719,23028525..23028687,23028747..23029052, |23029116..23029143) DBX|SD24921.5prime BLOC|complement(23027632..23027719,23028525..23028687,23028747..23029052, |23029116..23029143) DBX|EC01546.5prime BLOC|complement(23027619..23027719,23028525..23028687,23028747..23029052, |23029116..23029143) DBX|EC28062.5prime BLOC|complement(23028652..23028687,23028747..23029052,23029116..23029142) DBX|SD18126.5prime BLOC|complement(23014425..23014632,23028525..23028687,23028747..23029052, |23029116..23029140) DBX|BQ103251 BLOC|complement(23028789..23029052,23029116..23029135) DBX|EN13435.5prime BLOC|complement(23028543..23028687,23028747..23029052,23029116..23029133) DBX|EK165207.5prime BLOC|complement(23028605..23028687,23028747..23029052,23029116..23029132) DBX|EK122146.5prime BLOC|complement(23027669..23027719,23028525..23028687,23028747..23029052, |23029116..23029131) DBX|EC33630.5prime BLOC|complement(23027614..23027719,23028525..23028687,23028747..23029041) DBX|UT01726:contig1 BLOC|complement(23027475..23027719,23028525..23028687,23028747..23029052, |23029116..23029148) DBX|GM32043.5prime BLOC|complement(23028771..23029052,23029116..23029148) DBX|GM31237.5prime BLOC|complement(23027613..23027719,23028525..23028687,23028747..23029052, |23029116..23029148) DBX|GM30438.5prime BLOC|complement(23027633..23027719,23028525..23028687,23028747..23029052, |23029116..23029148) DBX|GM25764.5prime BLOC|complement(23028561..23028687,23028747..23029052,23029116..23029148) DBX|SD14377.5prime BLOC|complement(23027649..23027719,23028525..23028687,23028747..23029052, |23029116..23029148) DBX|GM04627.5prime BLOC|complement(23027640..23027719,23028525..23028687,23028747..23029052, |23029116..23029148) DBX|EK186029.5prime BLOC|complement(23028607..23028687,23028747..23029052,23029116..23029146, |23029278..23029306) DBX|GM27775.5prime BLOC|complement(23027649..23027719,23028525..23028687,23028747..23029052, |23029116..23029146,23029267..23029291) DBX|GM21119.5prime BLOC|complement(23027575..23027719,23028525..23028687,23028747..23029052, |23029116..23029146,23029267..23029286) DBX|EK278150.5prime BLOC|complement(23027684..23027719,23028525..23028687,23028747..23029039) DBX|EC39663.5prime BLOC|complement(23028618..23028687,23028747..23029029) DBX|EC33457.5prime BLOC|complement(23027632..23027719,23028525..23028687,23028747..23029024) DBX|BQ103670 BLOC|complement(23028832..23028994) DBX|ESG014a.E21_C07.3prime BLOC|complement(23027474..23027719,23028525..23028687,23028747..23028985) DBX|EC35553.5prime BLOC|complement(23027707..23027719,23028525..23028687,23028747..23028961) DBX|EK063248.5prime BLOC|complement(23028061..23028487) DBX|EP19103.3prime BLOC|complement(23027978..23028491) DBX|EK141826.5prime BLOC|complement(23028035..23028524) DBX|EC33461.5prime BLOC|complement(23027700..23027719,23028525..23028687,23028747..23028783) DBX|SD11179.5prime BLOC|complement(23027616..23027719,23028525..23028687,23028747..23029052, |23029116..23029146,23029267..23029282) DBX|SD17543.5prime BLOC|complement(23028519..23028687,23028747..23029052,23029116..23029146, |23029267..23029282) DBX|EN15055.5prime BLOC|complement(23028561..23028687,23028747..23029052,23029116..23029146, |23029267..23029282) DBX|GM08960.5prime BLOC|complement(23027695..23027719,23028525..23028687,23028747..23029052, |23029116..23029148) DBX|AT16527.5prime BLOC|complement(23028876..23029052,23029116..23029148) DBX|SD14788.5prime BLOC|complement(23027581..23027719,23028525..23028687,23028747..23029052, |23029116..23029148) DBX|SD12304.5prime BLOC|complement(23027676..23027719,23028525..23028687,23028747..23029052, |23029116..23029148) DBX|GM17390.5prime BLOC|complement(23027631..23027719,23028525..23028687,23028747..23029052, |23029116..23029148) DBX|GM19648.5prime BLOC|complement(23028642..23028687,23028747..23029052,23029116..23029148) DBX|GM24257.5prime BLOC|complement(23028519..23028687,23028747..23029052,23029116..23029148) DBX|EC37319.5prime BLOC|complement(23027614..23027719,23028525..23028687,23028747..23028857) DBX|EC26319.5prime BLOC|complement(23028609..23028687,23028747..23028857) DBX|GM28635.5prime BLOC|complement(23028642..23028687,23028747..23028857) DBX|EK245501.5prime BLOC|complement(23028533..23028687,23028747..23028878) DBX|EC28053.5prime BLOC|complement(23027539..23027719,23028525..23028687,23028747..23028889) DBX|EK203818.5prime BLOC|complement(23027502..23027719,23028525..23028687,23028747..23028900) DBX|SD12842.5prime BLOC|complement(23027479..23027719,23028525..23028687,23028747..23028900) DBX|SD20359.5prime BLOC|complement(23027509..23027719,23028525..23028687,23028747..23028906) DBX|ESG014d.E21_F02.3prime BLOC|complement(23027473..23027719,23028525..23028687,23028747..23028929) DBX|EN05362.5prime BLOC|complement(23027610..23027719,23028525..23028687,23028747..23028954) DBX|GM32306.5prime BLOC|complement(23028798..23029052,23029116..23029148) DBX|SD27453.5prime BLOC|complement(23027612..23027719,23028525..23028687,23028747..23029052, |23029116..23029148) DBX|SD28185.5prime BLOC|complement(23027575..23027719,23028525..23028687,23028747..23029052, |23029116..23029148) DBX|SD16713.5prime BLOC|complement(23027602..23027719,23028525..23028687,23028747..23029052, |23029116..23029148) DBX|SD23180.5prime BLOC|complement(23027613..23027719,23028525..23028687,23028747..23029052, |23029116..23029148) DBX|SD22436.5prime BLOC|complement(23027484..23027719,23028525..23028687,23028747..23029052, |23029116..23029148) DBX|SD23910.5prime BLOC|complement(23027632..23027719,23028525..23028687,23028747..23029052, |23029116..23029148) DBX|SD09663.5prime BLOC|complement(23028632..23028687,23028747..23029052,23029116..23029148) DBX|EN02937.5prime BLOC|complement(23028586..23028687,23028747..23029052,23029116..23029148) DBX|EN03320.5prime BLOC|complement(23027669..23027719,23028525..23028687,23028747..23029052, |23029116..23029148) DBX|EN04214.5prime BLOC|complement(23028566..23028687,23028747..23029052,23029116..23029148) DBX|EC14422.5prime BLOC|complement(23028653..23028687,23028747..23029052,23029116..23029148) DBX|EC26169.5prime BLOC|complement(23027705..23027719,23028525..23028687,23028747..23029052, |23029116..23029148) DBX|EC30766.5prime BLOC|complement(23027697..23027719,23028525..23028687,23028747..23029052, |23029116..23029148) DBX|EC32286.5prime BLOC|complement(23028784..23029052,23029116..23029148) DBX|EC43876.5prime BLOC|complement(23028804..23029052,23029116..23029148) DBX|EN10063.5prime BLOC|complement(23028642..23028687,23028747..23029052,23029116..23029148) DBX|EN11760.5prime BLOC|complement(23028566..23028687,23028747..23029052,23029116..23029148) DBX|EN11951.5prime BLOC|complement(23028643..23028687,23028747..23029052,23029116..23029148) DBX|EN12516.5prime BLOC|complement(23028564..23028687,23028747..23029052,23029116..23029148) DBX|GM01094.5prime BLOC|complement(23027694..23027719,23028525..23028687,23028747..23029052, |23029116..23029148) DBX|SD15631.5prime BLOC|complement(23027519..23027719,23028525..23028687,23028747..23029052, |23029116..23029147) DBX|GM27196.5prime BLOC|complement(23027512..23027719,23028525..23028687,23028747..23029052, |23029116..23029147) DBX|GM28247.5prime BLOC|complement(23027496..23027719,23028525..23028687,23028747..23029052, |23029116..23029147) DBX|SD17564.5prime BLOC|complement(23027623..23027719,23028525..23028687,23028747..23029052, |23029116..23029147) DBX|SD20057.5prime BLOC|complement(23027616..23027719,23028525..23028687,23028747..23029052, |23029116..23029147) DBX|BQ103393 BLOC|complement(23028659..23028687,23028747..23029052,23029116..23029147) DBX|ESG011b.E7_A03.5prime BLOC|complement(23027614..23027719,23028525..23028687,23028747..23029052, |23029116..23029147) DBX|UT01965:contig1 BLOC|complement(23027505..23027719,23028525..23028687,23028747..23029052, |23029116..23029147) DBX|GM01741.5prime BLOC|complement(23027616..23027719,23028525..23028687,23028747..23029052, |23029116..23029146) DBX|EN04359.5prime BLOC|complement(23028620..23028687,23028747..23029052,23029116..23029133) DBX|EC37517.5prime BLOC|complement(23027705..23027719,23028525..23028687,23028747..23029052, |23029116..23029136) DBX|EC26517.5prime BLOC|complement(23027592..23027719,23028525..23028687,23028747..23029052, |23029116..23029136) DBX|GM02378.5prime BLOC|complement(23028566..23028687,23028747..23029052,23029116..23029146) DBX|SD27195.5prime BLOC|complement(23027649..23027719,23028525..23028687,23028747..23029052, |23029116..23029146) DBX|BQ103505 BLOC|complement(23028752..23029052,23029116..23029146) DBX|EK091334.5prime BLOC|complement(23028671..23028687,23028747..23029052,23029116..23029146) DBX|EN13230.5prime BLOC|complement(23028887..23029052,23029116..23029146) DBX|GM07854.5prime BLOC|complement(23028798..23029052,23029116..23029144) DBX|EC28471.5prime BLOC|complement(23028768..23029052,23029116..23029144) DBX|EC38864.5prime BLOC|complement(23028769..23029052,23029116..23029144) DBX|GM30929.5prime BLOC|complement(23027611..23027719,23028525..23028687,23028747..23029052, |23029116..23029143) DBX|SD01338.5prime BLOC|complement(23027514..23027719,23028525..23028687,23028747..23029052, |23029116..23029143) } EVD { PRG|blastx_masked DB|aa_SPTR.dmel CLA|protein DT|20041008 DBX|O61231 BLOC|complement(23027558..23027719,23028513..23028689,23028746..23029051) } EVD { PRG|blastx_masked DB|aa_SPTR.plant CLA|protein DT|20041008 DBX|Q9FUN3 BLOC|complement(23028513..23028689,23028746..23029051) DBX|O22431 BLOC|complement(23028525..23028689,23028746..23029051) DBX|Q9FVN3 BLOC|complement(23028525..23028689,23028746..23029051) } EVD { PRG|blastx_masked DB|aa_SPTR.worm CLA|protein DT|20041008 DBX|Q09533 BLOC|complement(23028528..23028689,23028746..23029051) } EVD { PRG|blastx_masked DB|aa_SPTR.primate CLA|protein DT|20041008 DBX|Q96L21 BLOC|complement(23028513..23028689,23028746..23029051) DBX|P27635 BLOC|complement(23028513..23028689,23028746..23029051) DBX|Q8TDA5 BLOC|complement(23028513..23028689,23028746..23029051) } EVD { PRG|promoter DB|dummy CLA|promoter DT|20041008 BLOC|complement(23029313..23029314) BLOC|complement(23028100..23028101) } EVD { PRG|blastx_masked DB|aa_SPTR.yeast CLA|protein DT|20041008 DBX|P41805 BLOC|complement(23028525..23028689,23028746..23029051) } VERS|4.3 } # EOR GADR { RETE|ID 1 FBan0032500 GID 1 FBgn0052500 GSYM 1 CG32500 CGSYM 1 CG32500 ARM 1 X CLOC 1 20A4-20A4 SCAF 1 AE003122 TRREC 2 AALEN 2 110 ID|FBan0032500 SYM|CG32500 GENSR { GSYM|CG32500 ID|FBgn0052500 } ARM|X SCAF|AE003122 BLOC|complement(21432216..21434380) CLOCC|20A4-20A4 SQLEN|2165 ID2|FBgn0042218 |FBgn0063180 SYN|CG18856 |BcDNA:GM32035 EST|EK115126 |EP17815 |EK041453 CDNA|RE53788 CMT|comment=DGC clone appears problematic (RE53788): unspliced intron |comment=Flag Cambridge: This was transiently CG32500; then mislabelled CG18856. |comment=Atypical cDNA: retained intron; associated with partial duplication. |comment=Probable pseudogene or gene remnant; exact duplication |of 5' end of CG17686. Probable product of small (~1kb) tandem |duplication. DT|20050909 TRREC { NAM|CG32500-RB SYN|FlyBase:FBtr0100357 |FlyBase:FBpp0099763 |GB_protein:AAN09004.2 AANAM|CG32500-PB SQLEN|2072 (-) AALEN|110 BLOC|complement(21432247..21434218,21434278..21434377) CDS|complement(21433957..21434218,21434278..21434345) CMT|status=not done |comment=Based on atypical cDNA: retained intron; designated CDS |uncertain. DT|20050909 } TRREC { NAM|CG32500-RA SYN|FlyBase:FBtr0077374 |GB_protein:AAN09005.2 |FlyBase:FBpp0077066 AANAM|CG32500-PA SQLEN|1039 (-) AALEN|283 BLOC|complement(21432216..21432894,21433962..21434218,21434278..21434380) CDS|complement(21432371..21432894,21433962..21434218,21434278..21434345) DT|20050909 } EVD { PRG|blastx_masked DB|aa_SPTR.othinv CLA|protein DT|20041008 DBX|Q9UUB8 BLOC|complement(21432437..21432895) DBX|Q8X030 BLOC|complement(21432455..21432901) DBX|Q7QFP2 BLOC|complement(21432437..21432895,21433957..21434103) } EVD { PRG|genie_masked DB|dummy CLA|genie_masked DT|20041008 BLOC|complement(21432368..21432894,21433962..21434218,21434278..21434345) } EVD { PRG|tblastx_masked DB|na_dbEST.insect CLA|EST DBX|BM631838 BLOC|complement(21432530..21432895,21433957..21434103) DBX|BM586928 BLOC|complement(21432389..21432859) DBX|BX627901 BLOC|complement(21432488..21432895,21433957..21434103) } EVD { PRG|tblastxwrap_masked DB|na_scf_chunk_agambiae.fa CLA|DNA DT|20041008 DBX|AAAB01008846.1p7 BLOC|complement(21432386..21432895) DBX|AAAB01008846.1p7 BLOC|complement(21433957..21434103) } EVD { PRG|prosplign DB|aa_ncbi_other CLA|protein DT|20060123 DBX|NP_001002755 BLOC|complement(21432461..21432894,21433962..21434095,21434254..21434263, |21434381..21434516) DBX|NP_001002756 BLOC|complement(21432461..21432772) DBX|NP_001002757 BLOC|complement(21432461..21432772) } EVD { PRG|sim4tandem DB|na_gb.dmel CLA|cDNA DT|20050823 DBX|RE53788 BLOC|complement(21432247..21434218,21434278..21434377) } EVD { PRG|genscan_masked DB|dummy CLA|genscan_masked DT|20041008 BLOC|complement(21432368..21432894,21433962..21434493,21436782..21436928, |21436989..21437566,21439037..21439430,21440650..21440712) } EVD { PRG|blastx_masked DB|aa_SPTR.rodent CLA|protein DT|20041008 DBX|Q9QZ23 BLOC|complement(21432437..21432895,21433963..21434088) DBX|Q8CF80 BLOC|complement(21432437..21432895,21433963..21434088) DBX|AAQ73785 BLOC|complement(21432437..21432895,21433963..21434127) } EVD { PRG|augustus DB|dummy CLA|augustus DT|20050713 BLOC|complement(21432368..21432894,21433962..21434218,21434278..21434345) } EVD { PRG|blastx_masked DB|aa_SPTR.othvert CLA|protein DT|20041008 DBX|AAH65889 BLOC|complement(21432449..21432895,21433963..21434094) DBX|AAQ97790 BLOC|complement(21432461..21432895,21433963..21434094) } EVD { PRG|tblastxwrap_masked DB|na_baylorf1_scfchunk.dpse CLA|so DT|20041008 DBX|Contig266_Contig3993-1 BLOC|complement(21432410..21432895) DBX|Contig266_Contig3993-1 BLOC|complement(21433957..21434097) } EVD { PRG|blastx_masked DB|aa_SPTR.dmel CLA|protein DT|20041008 DBX|Q8SY96 BLOC|complement(21432371..21432895,21433957..21434217) DBX|Q8MSE0 BLOC|complement(21432371..21432673) DBX|Q8SYM2 BLOC|complement(21432371..21432772) DBX|Q9U4F4 BLOC|complement(21432371..21432895,21433957..21434217) } EVD { PRG|sim4 DB|na_dbEST.diff.dmel CLA|EST DBX|EK115126.5prime BLOC|complement(21433433..21433961) DBX|EP17815.3prime BLOC|complement(21433342..21433779) DBX|EK041453.5prime BLOC|complement(21427208..21427428,21433537..21433726) } EVD { PRG|blastx_masked DB|aa_SPTR.worm CLA|protein DT|20041008 DBX|Q21915 BLOC|complement(21432437..21432901,21433963..21434106) } EVD { PRG|blastx_masked DB|aa_SPTR.plant CLA|protein DT|20041008 DBX|Q9LIG6 BLOC|complement(21432455..21432913) DBX|Q94GV5 BLOC|complement(21432464..21432895,21433957..21434097) DBX|Q9C8J2 BLOC|complement(21432464..21432895,21433957..21434097) } EVD { PRG|blastx_masked DB|aa_SPTR.primate CLA|protein DT|20041008 DBX|Q7Z5B2 BLOC|complement(21432455..21432895,21433963..21434094) DBX|Q7Z5B1 BLOC|complement(21432455..21432895,21433963..21434094) DBX|AAQ73784 BLOC|complement(21432455..21432895,21433963..21434094) } EVD { PRG|promoter DB|dummy CLA|promoter DT|20041008 BLOC|complement(21433407..21433408) } EVD { PRG|blastx_masked DB|aa_SPTR.yeast CLA|protein DT|20041008 DBX|P32860 BLOC|complement(21432464..21432901) } VERS|4.3 } # EOR GADR { RETE|ID 1 FBan0032857 GID 1 FBgn0052857 GSYM 1 CG32857 CGSYM 1 CG32857 ARM 1 X CLOC 1 20A4-20A4 SCAF 1 AE003122 TRREC 1 AALEN 1 283 ID|FBan0032857 SYM|CG32857 GENSR { GSYM|CG32857 ID|FBgn0052857 } ARM|X SCAF|AE003122 BLOC|complement(21426127..21428272) CLOCC|20A4-20A4 SQLEN|2146 GO|nucleic acid binding ; GO:0003676 |ATP binding ; GO:0005524 |ATP-dependent helicase activity ; GO:0008026 ID2|FBan0032857 EST|EK041453 CDNA|GM32035 |RH16335 DT|20050909 TRREC { NAM|CG32857-RA SYN|FlyBase:FBtr0070052 |FlyBase:FBpp0070051 |GB_protein:AAN09001.1 |FlyBase:FBgn0077202 |FlyBase Annotation IDs:GA17188 |Dpse\GA17188 AANAM|CG32857-PA SQLEN|1036 (-) AALEN|283 BLOC|complement(21426127..21426802,21427854..21428110,21428170..21428272) CDS|complement(21426279..21426802,21427854..21428110,21428170..21428237) CMT|protein_id=AAN09001 |status=not done DT|20050909 } EVD { PRG|blastx_masked DB|aa_SPTR.othinv CLA|protein DT|20041008 DBX|Q9UUB8 BLOC|complement(21426345..21426803) DBX|Q8X030 BLOC|complement(21426363..21426809) DBX|Q7QFP2 BLOC|complement(21426345..21426803,21427849..21427995) } EVD { PRG|genie_masked DB|dummy CLA|genie_masked DT|20041008 BLOC|complement(21426276..21426802,21427854..21428110,21428170..21428237) } EVD { PRG|tblastx_masked DB|na_dbEST.insect CLA|EST DBX|BM631838 BLOC|complement(21426438..21426803,21427849..21427995) DBX|BM586928 BLOC|complement(21426297..21426767) DBX|BX627901 BLOC|complement(21426396..21426803,21427849..21427995) } EVD { PRG|tblastxwrap_masked DB|na_scf_chunk_agambiae.fa CLA|DNA DT|20041008 DBX|AAAB01008846.1p7 BLOC|complement(21426294..21426803) DBX|AAAB01008846.1p7 BLOC|complement(21427849..21427995) } EVD { PRG|prosplign DB|aa_ncbi_other CLA|protein DT|20060123 DBX|NP_001002755 BLOC|complement(21426369..21426802,21427854..21427987,21428146..21428155, |21428273..21428408) DBX|NP_001002756 BLOC|complement(21426369..21426680) DBX|NP_001002757 BLOC|complement(21426369..21426680) } EVD { PRG|sim4tandem DB|na_gb.dmel CLA|cDNA DT|20050823 DBX|GM32035 BLOC|complement(21426155..21426596) DBX|AF213379 BLOC|complement(21426157..21426802,21427854..21428110,21428170..21428247) DBX|RH16335 BLOC|complement(21426123..21426802,21427854..21428110,21428170..21428272) } EVD { PRG|genscan_masked DB|dummy CLA|genscan_masked DT|20041008 BLOC|complement(21426276..21426802,21427854..21428385,21428982..21429495, |21429656..21430243,21430367..21430719,21431041..21431081,21431340..21431718) } EVD { PRG|blastx_masked DB|aa_SPTR.rodent CLA|protein DT|20041008 DBX|Q9QZ23 BLOC|complement(21426345..21426803,21427855..21427980) DBX|Q8CF80 BLOC|complement(21426345..21426803,21427855..21427980) DBX|AAQ73785 BLOC|complement(21426345..21426803,21427855..21428019) } EVD { PRG|augustus DB|dummy CLA|augustus DT|20050713 BLOC|complement(21426276..21426802,21427854..21428110,21428170..21428237) } EVD { PRG|blastx_masked DB|aa_SPTR.othvert CLA|protein DT|20041008 DBX|AAH65889 BLOC|complement(21426357..21426803,21427855..21427986) DBX|AAQ97790 BLOC|complement(21426369..21426803,21427855..21427986) } EVD { PRG|tblastxwrap_masked DB|na_baylorf1_scfchunk.dpse CLA|so DT|20041008 DBX|Contig266_Contig3993-1 BLOC|complement(21426318..21426803) DBX|Contig266_Contig3993-1 BLOC|complement(21427849..21427989) } EVD { PRG|blastx_masked DB|aa_SPTR.dmel CLA|protein DT|20041008 DBX|Q8SY96 BLOC|complement(21426279..21426803,21427849..21428109) DBX|Q8MSE0 BLOC|complement(21426279..21426581) DBX|Q8SYM2 BLOC|complement(21426279..21426680) DBX|Q9U4F4 BLOC|complement(21426279..21426803,21427849..21428109) } EVD { PRG|sim4 DB|na_dbEST.diff.dmel CLA|EST DBX|EK041453.5prime BLOC|complement(21427208..21427428,21433537..21433726) } EVD { PRG|blastx_masked DB|aa_SPTR.worm CLA|protein DT|20041008 DBX|Q21915 BLOC|complement(21426345..21426809,21427855..21427998) } EVD { PRG|blastx_masked DB|aa_SPTR.plant CLA|protein DT|20041008 DBX|Q9LIG6 BLOC|complement(21426363..21426821) DBX|Q94GV5 BLOC|complement(21426372..21426803,21427849..21427989) DBX|Q9C8J2 BLOC|complement(21426372..21426803,21427849..21427989) } EVD { PRG|blastx_masked DB|aa_SPTR.primate CLA|protein DT|20041008 DBX|Q7Z5B2 BLOC|complement(21426363..21426803,21427855..21427986) DBX|AAQ73784 BLOC|complement(21426363..21426803,21427855..21427986) DBX|Q7Z5B1 BLOC|complement(21426363..21426803,21427855..21427986) } EVD { PRG|promoter DB|dummy CLA|promoter DT|20041008 BLOC|complement(21427316..21427317) } EVD { PRG|blastx_masked DB|aa_SPTR.yeast CLA|protein DT|20041008 DBX|P32860 BLOC|complement(21426372..21426809) } VERS|4.3 } # EOR GADR { RETE|ID 1 FBan0017686 GID 1 FBgn0024807 GSYM 1 DIP1 CGSYM 1 CG17686 ARM 1 X CLOC 1 20A4-20A5 SCAF 1 AE003122 TRREC 4 AALEN 4 410 ID|FBan0017686 SYM|CG17686 GENSR { GSYM|DIP1 ID|FBgn0024807 } ARM|X SCAF|AE003122 BLOC|complement(21435472..21440834) CLOCC|20A4-20A5 SQLEN|5363 GO|nucleus ; GO:0005634 |chromatin binding ; GO:0003682 |cytoplasm ; GO:0005737 |chromatin ; GO:0000785 |protein binding ; GO:0005515 |double-stranded RNA binding ; GO:0003725 ID2|FBan0017686 SYN|klt |dip1a |TO67 |klett |UbxBP1 |clot 2020 |clot 10495 |unnamed |TO34 EST|EP12415 |EK097138 |EK096047 |GH17590 |GH15935 |LP07878 |LP12356 |GH26615 |LP11783 |GH21996 |RE61689 |RH16562 |RE09976 |EK179927 |EK086608 |EK251638 |EP08915 |EC24067 |EK200215 |EK134757 |EK198551 |EK195841 |EK097101 |RE40487 |RH49960 |RE74835 |RE23740 |RE40524 |RE10847 |LD08769 |EK212244 |EK257023 |SD25235 |EK099709 |EK272252 |EK277847 |EK307638 |AT13550 |SD21610 |SD21620 |AT17539 |AT06857 |AT07455 |EK242136 |EK261551 |EK300617 |EK214656 |EK249459 |GM03322 |EK169841 |EK074714 |EP12927 |EP22028 |EK239811 |LP02946 |GH26266 |RH66852 |LD08867 |RE28121 |RE14404 |RE11817 |RE35869 |RE31150 |RE62588 |RE71506 |RE68577 |RE07195 |GH20159 |GH11943 |HL07992 |LP04558 |GH10918 |LD23092 |GH16142 |LD36232 |LP07724 |LD19452 |LD45242 |LD14381 |GH18616 CDNA|RE10847 |GH20159 DT|20040809 TRREC { NAM|DIP1-RD SYN|FlyBase:FBtr0077373 |FlyBase Annotation IDs:CG17686-RD |FlyBase:FBpp0077065 |FlyBase Annotation IDs:CG17686-PD |GB_protein:AAN09007.1 AANAM|DIP1-PD SQLEN|2614 (-) AALEN|410 BLOC|complement(21435472..21436928,21436989..21437566,21439037..21439430, |21440650..21440834) CDS|complement(21436734..21436928,21436989..21437566,21439037..21439430, |21440650..21440712) CMT|validation_flag=transposon in gene |protein_id=AAN09007 DT|20021004 } TRREC { NAM|DIP1-RB SYN|FlyBase:FBtr0077371 |FlyBase Annotation IDs:CG17686-RB |FlyBase:FBpp0077063 |FlyBase Annotation IDs:CG17686-PB |GB_protein:AAN09008.1 AANAM|DIP1-PB SQLEN|3563 (-) AALEN|409 BLOC|complement(21435472..21436928,21436989..21437566,21439037..21439430, |21439520..21440468,21440650..21440834) CDS|complement(21436734..21436928,21436989..21437566,21439037..21439430, |21439520..21439579) CMT|validation_flag=transposon in gene |protein_id=AAN09008 DT|20021004 } TRREC { NAM|DIP1-RA SYN|FlyBase:FBtr0077370 |FlyBase Annotation IDs:CG17686-RA |FlyBase:FBpp0077062 |FlyBase Annotation IDs:CG17686-PA |GB_protein:AAF45390.2 AANAM|DIP1-PA SQLEN|3744 (-) AALEN|409 BLOC|complement(21435472..21436928,21436989..21437566,21439037..21439430, |21439520..21440834) CDS|complement(21436734..21436928,21436989..21437566,21439037..21439430, |21439520..21439579) CMT|comment=Transposon inserted in intron |validation_flag=transposon in gene |protein_id=AAF45390 DT|20021004 } TRREC { NAM|DIP1-RC SYN|FlyBase:FBtr0077372 |FlyBase Annotation IDs:CG17686-RC |FlyBase:FBpp0077064 |FlyBase Annotation IDs:CG17686-PC |GB_protein:AAN09006.1 |FlyBase:FBgn0074639 |FlyBase Annotation IDs:GA14612 |Dpse\GA14612 AANAM|DIP1-PC SQLEN|2569 (-) AALEN|395 BLOC|complement(21435472..21436928,21436989..21437566,21439037..21439385, |21440650..21440834) CDS|complement(21436734..21436928,21436989..21437566,21439037..21439385, |21440650..21440712) CMT|validation_flag=transposon in gene |protein_id=AAN09006 |comment=Range of putative ortholog from tblastn was extended |to cover the gene prediction DT|20021004 } EVD { PRG|sim4 DB|na_transcript.dmel.RELEASE31 CLA|mRNA DT|20041008 DBX|CG17686-RA.31 BLOC|complement(21435472..21436928,21436989..21437566,21439037..21439430, |21439520..21440834) DBX|CG17686-RB.31 BLOC|complement(21435472..21436928,21436989..21437566,21439037..21439430, |21439520..21440468,21440650..21440834) DBX|CG17686-RC.31 BLOC|complement(21435472..21436928,21436989..21437566,21439037..21439385, |21440650..21440834) DBX|CG17686-RD.31 BLOC|complement(21435472..21436928,21436989..21437566,21439037..21439430, |21440650..21440834) } EVD { PRG|blastx_masked DB|aa_SPTR.othinv CLA|protein DT|20041008 DBX|Q7QHX6 BLOC|complement(21437142..21437204,21437310..21437582) } EVD { PRG|genscan_masked DB|dummy CLA|genscan_masked DT|20041008 BLOC|complement(21432368..21432894,21433962..21434493,21436782..21436928, |21436989..21437566,21439037..21439430,21440650..21440712) } EVD { PRG|sim4tandem DB|na_gb.dmel CLA|so DT|20050823 DBX|AF175711 BLOC|complement(21435461..21435640,21435678..21436425,21436552..21436617, |21436743..21436928,21436989..21437566,21439037..21439430,21440650..21440807) DBX|AF175713 BLOC|complement(21428558..21428620,21435529..21435873,21435874..21436928, |21436989..21437566,21439037..21439385,21440743..21440808) DBX|AJ250868 BLOC|complement(21435461..21435935,21436167..21436928,21436989..21437566, |21439037..21439430,21440650..21440816) DBX|AJ250866 BLOC|complement(21435461..21435935,21436167..21436928,21436989..21437566, |21439037..21439430,21439520..21440468,21440650..21440816) DBX|AJ250869 BLOC|complement(21435461..21435935,21436167..21436928,21436989..21437566, |21439037..21439385,21440650..21440816) DBX|AJ250867 BLOC|complement(21435461..21435935,21436167..21436928,21436989..21437566, |21439037..21439385,21439520..21440468,21440650..21440816) DBX|RE10847 BLOC|complement(21435461..21436928,21436989..21437566,21439037..21439430, |21439524..21440468,21440650..21440834) DBX|AF182154 BLOC|complement(21435810..21436928,21436989..21437566,21439037..21439385, |21440650..21440788) DBX|AY217028 BLOC|complement(21435820..21436603,21436680..21436928,21436989..21437566, |21440650..21440799) DBX|AF218310 BLOC|complement(21435820..21436603,21436680..21436928,21436989..21437566, |21439037..21439430,21440650..21440799) DBX|AF213338 BLOC|complement(21436746..21436928,21436989..21437566,21439037..21440802) } EVD { PRG|sim4 DB|na_gadfly.dros.RELEASE2 CLA|mRNA DT|20041008 DBX|CT34178.2 BLOC|complement(21436784..21436928,21436989..21437566,21439037..21439430, |21439520..21439582,21439634..21440468,21440650..21440827) } EVD { PRG|prosplign DB|aa_ncbi_dmel CLA|protein DT|20060123 DBX|AAX33581 BLOC|complement(21436734..21436928,21436989..21437566,21439037..21439397) } EVD { PRG|augustus DB|dummy CLA|augustus DT|20050713 BLOC|complement(21436731..21436928,21436989..21437566,21439037..21439430, |21442969..21442989) } EVD { PRG|genie_masked DB|dummy CLA|genie_masked DT|20041008 BLOC|complement(21436731..21436928,21436989..21437566,21439037..21439430, |21439520..21439579) } EVD { PRG|tblastxwrap_masked DB|na_baylorf1_scfchunk.dpse CLA|so DT|20041008 DBX|Contig3323_Contig6140-3 BLOC|complement(21436749..21436886) DBX|Contig266_Contig3993-1 BLOC|complement(21436740..21436928) DBX|Contig266_Contig3993-1 BLOC|complement(21436983..21437117) DBX|Contig266_Contig3993-1 BLOC|complement(21437103..21437288) DBX|Contig3323_Contig6140-3 BLOC|complement(21437262..21437477) DBX|Contig266_Contig3993-1 BLOC|complement(21437298..21437567) } EVD { PRG|blastx_masked DB|aa_SPTR.dmel CLA|protein DT|20041008 DBX|Q9VRL8 BLOC|complement(21436752..21436928,21436995..21437036,21437310..21437552) DBX|AAS15683 BLOC|complement(21436752..21436928,21436995..21437036,21437310..21437552) DBX|Q8MRY4 BLOC|complement(21436752..21436928,21436995..21437036,21437133..21437567) DBX|Q86LT0 BLOC|complement(21436746..21436928,21436971..21437570) DBX|Q9VZ88 BLOC|complement(21436752..21436988,21437310..21437570) DBX|Q9TW12 BLOC|complement(21436746..21436928,21436971..21437567,21439038..21439190) DBX|Q9GNA3 BLOC|complement(21436746..21436928,21436971..21437567,21439038..21439394) DBX|Q9NIH3 BLOC|complement(21436746..21436928,21436971..21437567,21439038..21439397) DBX|Q8MRC7 BLOC|complement(21436746..21436928,21436971..21437567,21439038..21439397) DBX|Q9GNJ2 BLOC|complement(21436746..21436928,21436971..21437567,21439038..21439412) DBX|Q9U4F5 BLOC|complement(21436746..21436928,21436971..21437567,21439038..21439412) DBX|Q9U6N4 BLOC|complement(21436746..21436928,21436971..21437567,21439038..21439412) DBX|Q9GNA6 BLOC|complement(21436746..21436928,21436971..21437567,21439038..21439475) DBX|Q9TW27 BLOC|complement(21436746..21436928,21436971..21437567,21439038..21439475) DBX|Q9NHW9 BLOC|complement(21436746..21436928,21436971..21437567,21439038..21439475) DBX|Q9GND0 BLOC|complement(21436746..21436928,21436971..21437567,21439038..21439499) DBX|Q9W5S7 BLOC|complement(21436746..21436928,21436971..21437567,21439038..21439499) DBX|Q9GNA3 BLOC|complement(21439170..21439490,21439520..21439579) DBX|Q9GND0 BLOC|complement(21439520..21439579) DBX|Q9W5S7 BLOC|complement(21439520..21439579) } EVD { PRG|sim4 DB|na_dbEST.diff.dmel CLA|EST DBX|EP12415.3prime BLOC|complement(21439060..21439430) DBX|EK097138.5prime BLOC|complement(21439483..21439832) DBX|EK096047.5prime BLOC|complement(21438011..21438365) DBX|EK179927.5prime BLOC|complement(21437365..21437566,21439037..21439057) DBX|EK086608.5prime BLOC|complement(21436772..21436928,21436989..21437364) DBX|EK251638.5prime BLOC|complement(21435975..21436166) DBX|EP08915.3prime BLOC|complement(21435491..21435685) DBX|EC24067.5prime BLOC|complement(21435622..21436068) DBX|EK200215.5prime BLOC|complement(21435497..21435640,21435678..21435972) DBX|EK134757.5prime BLOC|complement(21435533..21435640,21435677..21436052) DBX|EK198551.5prime BLOC|complement(21435804..21435978) DBX|EK195841.5prime BLOC|complement(21437515..21437566,21439037..21439454) DBX|EK097101.5prime BLOC|complement(21439395..21439832) DBX|EK212244.5prime BLOC|complement(21439144..21439430) DBX|EK257023.5prime BLOC|complement(21439280..21439430,21439596..21439855) DBX|SD25235.5prime BLOC|complement(21439376..21439430,21439520..21439962) DBX|EK099709.5prime BLOC|complement(21440399..21440816) DBX|EK272252.5prime BLOC|complement(21440315..21440468,21440650..21440816) DBX|EK277847.5prime BLOC|complement(21440650..21440816) DBX|EK307638.5prime BLOC|complement(21440315..21440468,21440650..21440816) DBX|AT13550.5prime BLOC|complement(21437538..21437566,21439037..21439430,21440650..21440802) DBX|SD21610.5prime BLOC|complement(21440017..21440468,21440650..21440802) DBX|SD21620.5prime BLOC|complement(21439967..21440468,21440650..21440802) DBX|AT17539.5prime BLOC|complement(21437422..21437566,21439037..21439430,21440650..21440798) DBX|AT06857.5prime BLOC|complement(21437427..21437566,21439037..21439430,21440650..21440798) DBX|AT07455.5prime BLOC|complement(21437364..21437566,21439037..21439430,21440650..21440781) DBX|EK242136.5prime BLOC|complement(21440121..21440337) DBX|EK261551.5prime BLOC|complement(21439888..21440311) DBX|EK300617.5prime BLOC|complement(21440074..21440311) DBX|EK214656.5prime BLOC|complement(21437513..21437566,21439037..21439315) DBX|EK249459.5prime BLOC|complement(21437200..21437566,21439037..21439097) DBX|GM03322.5prime BLOC|complement(21437117..21437566,21439037..21439095) DBX|EK169841.5prime BLOC|complement(21437403..21437566,21439037..21439057) DBX|EK074714.5prime BLOC|complement(21436875..21436928,21436989..21437364) DBX|EP12927.3prime BLOC|complement(21436690..21436928,21436989..21437301) DBX|EP22028.3prime BLOC|complement(21436690..21436928,21436989..21437288) DBX|EK239811.5prime BLOC|complement(21435975..21436166) } EVD { PRG|tblastx_masked DB|na_dbEST.insect CLA|EST DBX|BX564018 BLOC|complement(21436752..21436928,21436986..21437204) DBX|BX557093 BLOC|complement(21436752..21436928,21436986..21437204) DBX|BX553914 BLOC|complement(21436752..21436928,21436986..21437204) DBX|BX564019 BLOC|complement(21437298..21437564) DBX|BX565879 BLOC|complement(21437298..21437564) DBX|BX601649 BLOC|complement(21437310..21437582) } EVD { PRG|splign DB|na_cDNA_ncbi CLA|cDNA DT|20050907 DBX|GH20159 BLOC|complement(21435824..21436928,21436989..21437566,21439037..21439430, |21439524..21440468,21440650..21440827) } EVD { PRG|sim4 DB|na_dbEST.same.dmel CLA|EST DBX|GH17590:contig2 BLOC|complement(21435826..21436283) DBX|GH17590:contig1 BLOC|complement(21440242..21440788) DBX|GH15935.5prime BLOC|complement(21437390..21437566,21439037..21439385,21440650..21440788) DBX|LP07878.5prime BLOC|complement(21439270..21439385,21440650..21440792) DBX|LP12356.5prime BLOC|complement(21440005..21440468,21440650..21440795) DBX|GH26615.5prime BLOC|complement(21439997..21440468,21440650..21440797) DBX|LP11783.5prime BLOC|complement(21439919..21440468,21440650..21440801) DBX|GH21996.5prime BLOC|complement(21440003..21440468,21440650..21440805) DBX|RE61689.5prime BLOC|complement(21439061..21439430,21440650..21440811) DBX|RH16562.5prime BLOC|complement(21439247..21439430,21440650..21440813) DBX|RE09976.5prime BLOC|complement(21439996..21440245,21440743..21440815) DBX|RE40487.5prime BLOC|complement(21437423..21437566,21439037..21439385,21440650..21440816) DBX|RH49960.5prime BLOC|complement(21437492..21437566,21439037..21439430,21440650..21440821) DBX|RE74835.5prime BLOC|complement(21437148..21437566,21440650..21440821) DBX|RE23740.5prime BLOC|complement(21440044..21440468,21440650..21440821) DBX|RE40524.5prime BLOC|complement(21440188..21440468,21440650..21440834) DBX|RE10847:contig1 BLOC|complement(21440042..21440468,21440650..21440834) DBX|RE10847:contig2 BLOC|complement(21435472..21436051) DBX|LD08769.3prime BLOC|complement(21435830..21436377) DBX|LP02946.5prime BLOC|complement(21439954..21440468,21440650..21440795) DBX|GH26266.5prime BLOC|complement(21439938..21440468,21440650..21440798) DBX|RH66852.5prime BLOC|complement(21439031..21439430,21440650..21440798) DBX|LD08867.5prime BLOC|complement(21437494..21437566,21439037..21439430,21440650..21440802) DBX|RE28121.5prime BLOC|complement(21440326..21440811) DBX|RE14404.5prime BLOC|complement(21440344..21440811) DBX|RE11817.5prime BLOC|complement(21440064..21440468,21440650..21440813) DBX|RE35869.5prime BLOC|complement(21439066..21439385,21440650..21440816) DBX|RE31150.5prime BLOC|complement(21440042..21440468,21440650..21440817) DBX|RE62588.5prime BLOC|complement(21440075..21440468,21440650..21440818) DBX|RE71506.5prime BLOC|complement(21437199..21437566,21440650..21440821) DBX|RE68577.5prime BLOC|complement(21437196..21437566,21440650..21440821) DBX|RE07195.5prime BLOC|complement(21437173..21437566,21440650..21440821) DBX|GH20159:contig2 BLOC|complement(21435826..21436175) DBX|GH20159:contig1 BLOC|complement(21440107..21440468,21440650..21440827) DBX|GH11943.3prime BLOC|complement(21435826..21436296) DBX|HL07992.5prime BLOC|complement(21435950..21436320) DBX|LP04558.5prime BLOC|complement(21436792..21436928,21436989..21437413) DBX|GH10918.5prime BLOC|complement(21436804..21436928,21436989..21437470) DBX|LD23092.5prime BLOC|complement(21439646..21440122) DBX|GH16142.5prime BLOC|complement(21439630..21440284) DBX|LD36232.5prime BLOC|complement(21439895..21440466) DBX|LP07724.5prime BLOC|complement(21439854..21440468,21440650..21440771) DBX|LD19452.5prime BLOC|complement(21437518..21437566,21439037..21439430,21440650..21440781) DBX|LD45242:contig1 BLOC|complement(21437422..21437566,21439037..21439385,21440650..21440781) DBX|LD45242:contig2 BLOC|complement(21435472..21436049) DBX|LD14381.5prime BLOC|complement(21437353..21437566,21439037..21439385,21440650..21440788) DBX|GH18616.5prime BLOC|complement(21440245..21440788) } EVD { PRG|sim4 DB|na_transcript.dmel.RELEASE32 CLA|mRNA DT|20041008 DBX|CG17686-RA.32 BLOC|complement(21435472..21436928,21436989..21437566,21439037..21439430, |21439520..21440834) DBX|CG17686-RB.32 BLOC|complement(21435472..21436928,21436989..21437566,21439037..21439430, |21439520..21440468,21440650..21440834) DBX|CG17686-RC.32 BLOC|complement(21435472..21436928,21436989..21437566,21439037..21439385, |21440650..21440834) DBX|CG17686-RD.32 BLOC|complement(21435472..21436928,21436989..21437566,21439037..21439430, |21440650..21440834) } VERS|4.3 } # EOR GADR { RETE|ID 1 FBan0032819 GID 1 FBgn0052819 GSYM 1 CG32819 CGSYM 1 CG32819 ARM 1 X CLOC 1 20A4-20A4 SCAF 1 AE003122 TRREC 2 AALEN 2 601 ID|FBan0032819 SYM|CG32819 GENSR { GSYM|CG32819 ID|FBgn0052819 } ARM|X SCAF|AE003122 BLOC|complement(21428958..21431780) CLOCC|20A4-20A4 SQLEN|2823 GO|microtubule ; GO:0005874 |microtubule cytoskeleton organization and biogenesis ; GO:0000226 |structural constituent of cytoskeleton ; GO:0005200 |microtubule binding ; GO:0008017 ID2|FBan0032819 CDNA|LD08455 CMT|problem=true |comment=Flag Cambridge: Actually a triplication/duplication: X Y X Y X X homol to CG17450; | Y homol to CG18856 DT|20040809 TRREC { NAM|CG32819-RA SYN|FlyBase:FBtr0070050 |CG17450-RA |FlyBase:FBpp0070049 |GB_protein:AAN09002.1 AANAM|CG32819-PA SQLEN|1868 (-) AALEN|601 BLOC|complement(21428958..21429495,21429656..21430243,21430367..21430719, |21431392..21431780) CDS|complement(21428961..21429495,21429656..21430243,21430367..21430719, |21431392..21431718) CMT|protein_id=AAN09002 DT|20020813 } TRREC { NAM|CG32819-RB SYN|FlyBase:FBtr0070051 |CG17450-RB |FlyBase:FBpp0070050 |GB_protein:AAN09003.1 |FlyBase:FBgn0077177 |FlyBase Annotation IDs:GA17163 |Dpse\GA17163 AANAM|CG32819-PB SQLEN|1707 (-) AALEN|520 BLOC|complement(21428958..21429495,21429656..21430243,21430367..21430947) CDS|complement(21428961..21429495,21429656..21430243,21430367..21430803) CMT|protein_id=AAN09003 DT|20020813 } EVD { PRG|blastx_masked DB|aa_SPTR.othinv CLA|protein DT|20041008 DBX|Q9U0E3 BLOC|complement(21428961..21429494,21429655..21430236,21430366..21430455) DBX|Q26623 BLOC|complement(21428979..21429494,21429661..21430236) DBX|Q8T884 BLOC|complement(21428982..21429491,21429655..21430260) } EVD { PRG|sim4tandem DB|na_gb.dmel CLA|cDNA DT|20050823 DBX|LD08455 BLOC|complement(21428621..21428701,21428772..21429495,21429656..21430243, |21430367..21430719,21431392..21431780) } EVD { PRG|genscan_masked DB|dummy CLA|genscan_masked DT|20041008 BLOC|complement(21426276..21426802,21427854..21428385,21428982..21429495, |21429656..21430243,21430367..21430719,21431041..21431081,21431340..21431718) } EVD { PRG|blastx_masked DB|aa_SPTR.insect CLA|protein DT|20041008 DBX|Q9BLD7 BLOC|complement(21428982..21429482,21429658..21430164) DBX|Q8I1F3 BLOC|complement(21428994..21429380,21429679..21430227) DBX|Q7PRZ5 BLOC|complement(21428961..21429359,21429364..21429486,21429670..21430242, |21430366..21430650) } EVD { PRG|blastx_masked DB|aa_SPTR.rodent CLA|protein DT|20041008 DBX|Q99JD2 BLOC|complement(21428982..21429395,21429655..21430236) DBX|Q9DAH3 BLOC|complement(21428961..21429491,21429655..21430299) DBX|AAP86970 BLOC|complement(21428961..21429494,21429655..21430236,21430366..21430449) } EVD { PRG|augustus DB|dummy CLA|augustus DT|20050713 BLOC|complement(21428958..21429495,21429656..21430243,21430367..21430798, |21431336..21431718) } EVD { PRG|genie_masked DB|dummy CLA|genie_masked DT|20041008 BLOC|complement(21428958..21429495,21429656..21430243,21430367..21430798, |21431345..21431718) } EVD { PRG|tblastxwrap_masked DB|na_baylorf1_scfchunk.dpse CLA|so DT|20041008 DBX|Contig266_Contig3993-1 BLOC|complement(21428961..21429188) DBX|Contig3295_Contig8282-7 BLOC|complement(21429018..21429380) DBX|Contig3295_Contig8282-8 BLOC|complement(21429018..21429380) DBX|Contig7471_Contig6056-1 BLOC|complement(21428967..21429482) DBX|Contig266_Contig3993-1 BLOC|complement(21429186..21429512) DBX|Contig266_Contig3993-1 BLOC|complement(21429655..21430218) DBX|Contig266_Contig3993-1 BLOC|complement(21430600..21430779) DBX|Contig266_Contig3993-1 BLOC|complement(21431374..21431562) DBX|Contig266_Contig3993-1 BLOC|complement(21431605..21431718) } EVD { PRG|blastx_masked DB|aa_SPTR.othvert CLA|protein DT|20041008 DBX|Q9TTW3 BLOC|complement(21428979..21429395,21429655..21430236) DBX|Q7ZTQ3 BLOC|complement(21428991..21429389,21429673..21430236) DBX|Q7T0V0 BLOC|complement(21428961..21429494,21429655..21430236,21430366..21430449) } EVD { PRG|blastx_masked DB|aa_SPTR.dmel CLA|protein DT|20041008 DBX|Q9W1V2 BLOC|complement(21428994..21429380) DBX|Q8T3Z0 BLOC|complement(21428988..21429467,21429661..21430239) DBX|Q9V3M9 BLOC|complement(21428967..21429482,21429667..21430248) DBX|Q9I805 BLOC|complement(21428961..21429494,21429655..21430242,21430366..21430803) DBX|Q8I044 BLOC|complement(21428961..21429494,21429655..21430242,21430366..21430803) DBX|Q8IRZ1 BLOC|complement(21428961..21429494,21429655..21430242,21430366..21430719, |21431392..21431718) DBX|Q8I0K9 BLOC|complement(21428961..21429494,21429655..21430242,21430366..21430719, |21431392..21431718) } EVD { PRG|tblastx_masked DB|na_dbEST.insect CLA|EST DBX|CK533622 BLOC|complement(21428964..21429326) DBX|CK534227 BLOC|complement(21429207..21429494) DBX|BX616161 BLOC|complement(21428958..21429062,21429072..21429500,21429661..21429888) DBX|BP128100 BLOC|complement(21429655..21430242) DBX|CK534156 BLOC|complement(21429715..21430242) DBX|CK536409 BLOC|complement(21429979..21430242,21430366..21430737) } EVD { PRG|tblastxwrap_masked DB|na_scf_chunk_agambiae.fa CLA|DNA DT|20041008 DBX|AAAB01008846.1p73 BLOC|complement(21428961..21429185) DBX|AAAB01008846.1p73 BLOC|complement(21429186..21429326) DBX|AAAB01008807.1p38 BLOC|complement(21428985..21429485) DBX|AAAB01008846.1p73 BLOC|complement(21429315..21429497) DBX|AAAB01008846.1p73 BLOC|complement(21429655..21429783) DBX|AAAB01008846.1p73 BLOC|complement(21429760..21430242) DBX|AAAB01008846.1p73 BLOC|complement(21430366..21430662) } EVD { PRG|blastx_masked DB|aa_SPTR.primate CLA|protein DT|20041008 DBX|Q8WW24 BLOC|complement(21428982..21429494,21429655..21430299) DBX|Q9BXF9 BLOC|complement(21428982..21429494,21429655..21430299) DBX|Q96M29 BLOC|complement(21428982..21429494,21429658..21430236,21430354..21430449, |21430525..21430617) } EVD { PRG|prosplign DB|aa_ncbi_other CLA|protein DT|20060124 DBX|NP_001028687 BLOC|complement(21429225..21429515,21429812..21429874) } VERS|4.3 } # EOR GADR { RETE|ID 1 FBan0032820 GID 1 FBgn0052820 GSYM 1 CG32820 CGSYM 1 CG32820 ARM 1 X CLOC 1 20A4-20A4 SCAF 1 AE003122 TRREC 2 AALEN 2 601 ID|FBan0032820 SYM|CG32820 GENSR { GSYM|CG32820 ID|FBgn0052820 } ARM|X SCAF|AE003122 BLOC|complement(21422866..21425688) CLOCC|20A4-20A4 SQLEN|2823 ID2|FBan0032820 EST|AT16264 |AT25259 |bs05g12 |EK009131 |bs04e04 |bs80b07 |AT07334 |AT13314 |AT19705 |AT31451 |GH25094 |LP16067 |LD08455 CDNA|LD08455 CMT|problem=true DT|20040809 TRREC { NAM|CG32820-RA SYN|FlyBase:FBtr0070053 |FlyBase:FBpp0070052 |GB_protein:AAN08999.1 AANAM|CG32820-PA SQLEN|1868 (-) AALEN|601 BLOC|complement(21422866..21423403,21423564..21424151,21424275..21424627, |21425300..21425688) CDS|complement(21422869..21423403,21423564..21424151,21424275..21424627, |21425300..21425626) CMT|protein_id=AAN08999 DT|20040623 } TRREC { NAM|CG32820-RB SYN|FlyBase:FBtr0070054 |FlyBase:FBpp0070053 |GB_protein:AAN09000.1 |FlyBase:FBgn0077178 |FlyBase Annotation IDs:GA17164 |Dpse\GA17164 AANAM|CG32820-PB SQLEN|1563 (-) AALEN|520 BLOC|complement(21422866..21423403,21423564..21424151,21424275..21424711) CDS|complement(21422869..21423403,21423564..21424151,21424275..21424711) CMT|protein_id=AAN09000 DT|20040623 } EVD { PRG|blastx_masked DB|aa_SPTR.othinv CLA|protein DT|20041008 DBX|Q26623 BLOC|complement(21422887..21423402,21423569..21424144) DBX|Q8T884 BLOC|complement(21422890..21423399,21423563..21424168) DBX|Q9U0E3 BLOC|complement(21422869..21423402,21423563..21424144,21424274..21424363) } EVD { PRG|genie_masked DB|dummy CLA|genie_masked DT|20041008 BLOC|complement(21422866..21423403,21423564..21424151,21424275..21424706, |21425253..21425626) } EVD { PRG|tblastx_masked DB|na_dbEST.insect CLA|EST DBX|CK533622 BLOC|complement(21422872..21423234) DBX|CK534227 BLOC|complement(21423115..21423402) DBX|BX616161 BLOC|complement(21422866..21422970,21422980..21423408,21423569..21423796) DBX|BP128100 BLOC|complement(21423563..21424150) DBX|CK534156 BLOC|complement(21423623..21424150) DBX|CK536409 BLOC|complement(21423887..21424150,21424274..21424645) } EVD { PRG|tblastxwrap_masked DB|na_scf_chunk_agambiae.fa CLA|DNA DT|20041008 DBX|AAAB01008846.1p73 BLOC|complement(21422869..21423093) DBX|AAAB01008846.1p73 BLOC|complement(21423094..21423234) DBX|AAAB01008807.1p38 BLOC|complement(21422893..21423393) DBX|AAAB01008846.1p73 BLOC|complement(21423223..21423405) DBX|AAAB01008846.1p73 BLOC|complement(21423563..21423691) DBX|AAAB01008846.1p73 BLOC|complement(21423668..21424150) DBX|AAAB01008846.1p73 BLOC|complement(21424274..21424570) } EVD { PRG|sim4 DB|na_dbEST.same.dmel CLA|EST DBX|GH25094.3prime BLOC|complement(21422473..21422609,21422680..21423237) DBX|LP16067.5prime BLOC|complement(21423238..21423403,21423564..21424102) DBX|LD08455:contig1 BLOC|complement(21424397..21424627,21425300..21425688) DBX|LD08455:contig2 BLOC|complement(21422473..21422609,21422680..21423131) } EVD { PRG|prosplign DB|aa_ncbi_other CLA|protein DT|20060124 DBX|NP_001028687 BLOC|complement(21423133..21423423,21423720..21423782) } EVD { PRG|sim4 DB|na_transcript.dmel.RELEASE32 CLA|mRNA DT|20041008 DBX|CG32820-RB.32 BLOC|complement(21422866..21423403,21423564..21424151,21424275..21424711) DBX|CG32819-RB.32 BLOC|complement(21422866..21423403,21423564..21424151,21424275..21424855) DBX|CG32820-RA.32 BLOC|complement(21422866..21423403,21423564..21424151,21424275..21424627, |21425300..21425688) DBX|CG32819-RA.32 BLOC|complement(21422866..21423403,21423564..21424151,21424275..21424627, |21425300..21425688) } EVD { PRG|sim4 DB|na_transcript.dmel.RELEASE31 CLA|mRNA DT|20041008 DBX|CG32819-RA.31 BLOC|complement(21422866..21423403,21423564..21424151,21424275..21424627, |21425300..21425688) DBX|CG32820-RB.31 BLOC|complement(21422866..21423403,21423564..21424151,21424275..21424711) DBX|CG32819-RB.31 BLOC|complement(21422866..21423403,21423564..21424151,21424275..21424855) DBX|CG32820-RA.31 BLOC|complement(21422866..21423403,21423564..21424151,21424275..21424627, |21425300..21425688) } EVD { PRG|genscan_masked DB|dummy CLA|genscan_masked DT|20041008 BLOC|complement(21420184..21420710,21421762..21422293,21422890..21423403, |21423564..21424151,21424275..21424585) } EVD { PRG|sim4tandem DB|na_gb.dmel CLA|cDNA DT|20050823 DBX|LD08455 BLOC|complement(21422467..21422609,21422680..21423403,21423564..21424151, |21424275..21424627,21425300..21425688) } EVD { PRG|blastx_masked DB|aa_SPTR.insect CLA|protein DT|20041008 DBX|Q9BLD7 BLOC|complement(21422890..21423390,21423566..21424072) DBX|Q8I1F3 BLOC|complement(21422902..21423288,21423587..21424135) DBX|Q7PRZ5 BLOC|complement(21422869..21423267,21423272..21423394,21423578..21424150, |21424274..21424558) } EVD { PRG|blastx_masked DB|aa_SPTR.rodent CLA|protein DT|20041008 DBX|Q99JD2 BLOC|complement(21422890..21423303,21423563..21424144) DBX|Q9DAH3 BLOC|complement(21422869..21423399,21423563..21424207) DBX|AAP86970 BLOC|complement(21422869..21423402,21423563..21424144,21424274..21424357) } EVD { PRG|augustus DB|dummy CLA|augustus DT|20050713 BLOC|complement(21422866..21423403,21423564..21424151,21424275..21424706, |21425244..21425626) } EVD { PRG|tblastxwrap_masked DB|na_baylorf1_scfchunk.dpse CLA|so DT|20041008 DBX|Contig266_Contig3993-1 BLOC|complement(21422869..21423096) DBX|Contig3295_Contig8282-8 BLOC|complement(21422926..21423288) DBX|Contig3295_Contig8282-7 BLOC|complement(21422926..21423288) DBX|Contig7471_Contig6056-1 BLOC|complement(21422875..21423390) DBX|Contig266_Contig3993-1 BLOC|complement(21423094..21423420) DBX|Contig266_Contig3993-1 BLOC|complement(21423563..21424126) DBX|Contig266_Contig3993-1 BLOC|complement(21424508..21424687) DBX|Contig266_Contig3993-1 BLOC|complement(21425282..21425470) DBX|Contig266_Contig3993-1 BLOC|complement(21425513..21425626) } EVD { PRG|blastx_masked DB|aa_SPTR.othvert CLA|protein DT|20041008 DBX|Q9TTW3 BLOC|complement(21422887..21423303,21423563..21424144) DBX|Q7ZTQ3 BLOC|complement(21422899..21423297,21423581..21424144) DBX|Q7T0V0 BLOC|complement(21422869..21423402,21423563..21424144,21424274..21424357) } EVD { PRG|sim4 DB|na_dbEST.diff.dmel CLA|EST DBX|AT16264.5prime BLOC|complement(21423158..21423403,21423564..21424048) DBX|AT25259.5prime BLOC|complement(21423144..21423403,21423564..21424048) DBX|bs05g12.y1 BLOC|complement(21423184..21423403,21423564..21423645) DBX|EK009131.5prime BLOC|complement(21422924..21423260) DBX|bs04e04.y1 BLOC|complement(21423185..21423403,21423564..21423900) DBX|bs80b07.y1 BLOC|complement(21423016..21423403,21423564..21423745) DBX|AT07334.5prime BLOC|complement(21422970..21423403,21423564..21423710) DBX|AT13314.5prime BLOC|complement(21423383..21423403,21423564..21424139) DBX|AT19705.5prime BLOC|complement(21423340..21423403,21423564..21424151,21424275..21424351) DBX|AT31451.3prime BLOC|complement(21422478..21422609,21422680..21423007) } EVD { PRG|blastx_masked DB|aa_SPTR.dmel CLA|protein DT|20041008 DBX|Q9W1V2 BLOC|complement(21422902..21423288) DBX|Q8T3Z0 BLOC|complement(21422896..21423375,21423569..21424147) DBX|Q9V3M9 BLOC|complement(21422875..21423390,21423575..21424156) DBX|Q8I044 BLOC|complement(21422869..21423402,21423563..21424150,21424274..21424711) DBX|Q9I805 BLOC|complement(21422869..21423402,21423563..21424150,21424274..21424711) DBX|Q8IRZ1 BLOC|complement(21422869..21423402,21423563..21424150,21424274..21424627, |21425300..21425626) DBX|Q8I0K9 BLOC|complement(21422869..21423402,21423563..21424150,21424274..21424627, |21425300..21425626) } EVD { PRG|blastx_masked DB|aa_SPTR.primate CLA|protein DT|20041008 DBX|Q8WW24 BLOC|complement(21422890..21423402,21423563..21424207) DBX|Q9BXF9 BLOC|complement(21422890..21423402,21423563..21424207) DBX|Q96M29 BLOC|complement(21422890..21423402,21423566..21424144,21424262..21424357, |21424433..21424525) } VERS|4.3 } # EOR GADR { RETE|ID 1 FBan0033502 GID 1 FBgn0053502 GSYM 1 CG33502 CGSYM 1 CG33502 ARM 1 X CLOC 1 20A4-20A4 SCAF 1 AE003122 TRREC 1 AALEN 1 283 ID|FBan0033502 SYM|CG33502 GENSR { GSYM|CG33502 ID|FBgn0053502 } ARM|X SCAF|AE003122 BLOC|complement(21420031..21422180) CLOCC|20A4-20A4 SQLEN|2150 ID2|FBgn0042218 |FBgn0063180 SYN|BcDNA:GM32035 |CG18856 |unnamed EST|EC29170 |AM02277 |GM32035 |HL05386 |HL02945 |GH27548 |GH17455 |GH16627 |LP09573 |GH26438 |RE53788 |RH17458 |RH16630 |RH16375 |RH16335 |RH14077 |RH13223 |RH09638 |RH59302 |RH67494 |RH67457 |RH67043 |RH53195 |RH51765 |RH45482 |RH17255 |RH09676 |RH09664 |RH01953 |RH01378 |bs75h09 |GM15871 |SD05690 |RH01350 |SD18252 |RH62226 |GM27040 |GH22181 |EK257627 |GH21170 |GM32133 |RH45544 |SD22491 |GH08843 |AT10530 |GH24711 CDNA|GM32035 |RH16335 CMT|comment=Flag Cambridge: corresponds to the original CG18856 annotation. DT|20040809 TRREC { NAM|CG33502-RA SYN|FlyBase:FBtr0070055 |FlyBase Annotation IDs:CG18856-RA |FlyBase:FBpp0070054 |FlyBase Annotation IDs:CG18856-PA |GB_protein:AAG22462.2 AANAM|CG33502-PA SQLEN|1040 (-) AALEN|283 BLOC|complement(21420031..21420710,21421762..21422018,21422078..21422180) CDS|complement(21420187..21420710,21421762..21422018,21422078..21422145) DT|20040623 } EVD { PRG|blastx_masked DB|aa_SPTR.othinv CLA|protein DT|20041008 DBX|Q9UUB8 BLOC|complement(21420253..21420711) DBX|Q8X030 BLOC|complement(21420271..21420717) DBX|Q7QFP2 BLOC|complement(21420253..21420711,21421757..21421903) } EVD { PRG|sim4 DB|na_gadfly.dros.RELEASE2 CLA|mRNA DT|20041008 DBX|CT43433.2 BLOC|complement(21420033..21420711) } EVD { PRG|genie_masked DB|dummy CLA|genie_masked DT|20041008 BLOC|complement(21420184..21420710,21421762..21422018,21422078..21422145) } EVD { PRG|tblastx_masked DB|na_dbEST.insect CLA|EST DBX|BM631838 BLOC|complement(21420346..21420711,21421757..21421903) DBX|BM586928 BLOC|complement(21420205..21420675) DBX|BX627901 BLOC|complement(21420304..21420711,21421757..21421903) } EVD { PRG|tblastxwrap_masked DB|na_scf_chunk_agambiae.fa CLA|DNA DT|20041008 DBX|AAAB01008846.1p7 BLOC|complement(21420202..21420711) DBX|AAAB01008846.1p7 BLOC|complement(21421757..21421903) } EVD { PRG|sim4 DB|na_dbEST.same.dmel CLA|EST DBX|HL05386:contig1 BLOC|complement(21421336..21421938) DBX|HL05386:contig2 BLOC|complement(21420033..21420627) DBX|HL02945.5prime BLOC|complement(21421278..21421938) DBX|GH27548.5prime BLOC|complement(21420389..21420710,21421762..21422018,21422078..21422150) DBX|GH17455.5prime BLOC|complement(21420464..21420710,21421762..21422018,21422078..21422151) DBX|GH16627.5prime BLOC|complement(21420462..21420710,21421762..21422018,21422078..21422151) DBX|LP09573.5prime BLOC|complement(21420504..21420710,21421762..21422018,21422078..21422151) DBX|GH26438.5prime BLOC|complement(21420411..21420710,21421762..21422018,21422078..21422159) DBX|RE53788.5prime BLOC|complement(21421522..21422018,21422078..21422177) DBX|RH17458.5prime BLOC|complement(21420522..21420710,21421762..21422018,21422078..21422180) DBX|RH16630.5prime BLOC|complement(21420657..21420710,21421762..21422018,21422078..21422180) DBX|RH16375.5prime BLOC|complement(21420561..21420710,21421762..21422018,21422078..21422180) DBX|RH16335:contig1 BLOC|complement(21421760..21422018,21422078..21422180) DBX|RH16335:contig2 BLOC|complement(21420033..21420576) DBX|RH14077.5prime BLOC|complement(21420444..21420710,21421762..21422018,21422078..21422180) DBX|RH13223.5prime BLOC|complement(21421951..21422018,21422078..21422180) DBX|RH09638.5prime BLOC|complement(21420445..21420710,21421762..21422018,21422078..21422180) DBX|RH59302.5prime BLOC|complement(21420602..21420710,21421762..21422018,21422078..21422191) DBX|RH67494.5prime BLOC|complement(21420468..21420710,21421762..21422018,21422078..21422191) DBX|RH67457.5prime BLOC|complement(21420512..21420710,21421762..21422018,21422078..21422191) DBX|RH67043.5prime BLOC|complement(21420520..21420710,21421762..21422018,21422078..21422191) DBX|RH53195.5prime BLOC|complement(21420464..21420710,21421762..21422018,21422078..21422191) DBX|RH51765.5prime BLOC|complement(21420648..21420710,21421762..21422018,21422078..21422191) DBX|RH45482.5prime BLOC|complement(21420643..21420710,21421762..21422018,21422078..21422191) DBX|RH17255.5prime BLOC|complement(21420522..21420710,21421762..21422018,21422078..21422191) DBX|RH09676.5prime BLOC|complement(21420467..21420710,21421762..21422018,21422078..21422191) DBX|RH09664.5prime BLOC|complement(21420482..21420710,21421762..21422018,21422078..21422191) DBX|RH01953.5prime BLOC|complement(21420419..21420710,21421762..21422018,21422078..21422191) DBX|RH01378:contig1 BLOC|complement(21420033..21420710,21421762..21422018,21422078..21422191) DBX|RH01350:contig1 BLOC|complement(21420031..21420710,21421762..21422018,21422078..21422191) DBX|RH62226.5prime BLOC|complement(21420466..21420710,21421762..21422018,21422078..21422191) DBX|GH22181.5prime BLOC|complement(21420445..21420710,21421762..21422018,21422078..21422197) DBX|GH21170.5prime BLOC|complement(21420464..21420710,21421762..21422018,21422078..21422197) DBX|RH45544.5prime BLOC|complement(21420645..21420710,21421762..21422018,21422078..21422199) DBX|GH08843.5prime BLOC|complement(21420446..21420710,21421762..21422018,21422078..21422205) DBX|GH24711.3prime BLOC|complement(21420033..21420646) } EVD { PRG|prosplign DB|aa_ncbi_other CLA|protein DT|20060123 DBX|NP_001002755 BLOC|complement(21420277..21420710,21421762..21421895,21422054..21422063, |21422181..21422316) DBX|NP_001002756 BLOC|complement(21420277..21420588) DBX|NP_001002757 BLOC|complement(21420277..21420588) } EVD { PRG|sim4 DB|na_transcript.dmel.RELEASE32 CLA|mRNA DT|20041008 DBX|CG32857-RA.32 BLOC|complement(21420184..21420710,21421762..21422018,21422078..21422177) DBX|CG33502-RA.32 BLOC|complement(21420031..21420710,21421762..21422018,21422078..21422180) DBX|CG32500-RA.32 BLOC|complement(21420032..21420710,21421762..21422018,21422078..21422180) } EVD { PRG|sim4 DB|na_transcript.dmel.RELEASE31 CLA|mRNA DT|20041008 DBX|CG32857-RA.31 BLOC|complement(21420184..21420710,21421762..21422018,21422078..21422177) DBX|CG18856-RB.31 BLOC|complement(21420032..21420710,21421762..21422018,21422078..21422180) } EVD { PRG|sim4tandem DB|na_gb.dmel CLA|cDNA DT|20050823 DBX|GM32035 BLOC|complement(21420063..21420504) DBX|AF213379 BLOC|complement(21420065..21420710,21421762..21422018,21422078..21422155) DBX|RH16335 BLOC|complement(21420031..21420710,21421762..21422018,21422078..21422180) } EVD { PRG|genscan_masked DB|dummy CLA|genscan_masked DT|20041008 BLOC|complement(21420184..21420710,21421762..21422293,21422890..21423403, |21423564..21424151,21424275..21424585) } EVD { PRG|blastx_masked DB|aa_SPTR.rodent CLA|protein DT|20041008 DBX|Q9QZ23 BLOC|complement(21420253..21420711,21421763..21421888) DBX|Q8CF80 BLOC|complement(21420253..21420711,21421763..21421888) DBX|AAQ73785 BLOC|complement(21420253..21420711,21421763..21421927) } EVD { PRG|augustus DB|dummy CLA|augustus DT|20050713 BLOC|complement(21420184..21420710,21421762..21422018,21422078..21422145) } EVD { PRG|blastx_masked DB|aa_SPTR.othvert CLA|protein DT|20041008 DBX|AAH65889 BLOC|complement(21420265..21420711,21421763..21421894) DBX|AAQ97790 BLOC|complement(21420277..21420711,21421763..21421894) } EVD { PRG|tblastxwrap_masked DB|na_baylorf1_scfchunk.dpse CLA|so DT|20041008 DBX|Contig266_Contig3993-1 BLOC|complement(21420226..21420711) DBX|Contig266_Contig3993-1 BLOC|complement(21421757..21421897) } EVD { PRG|sim4 DB|na_dbEST.diff.dmel CLA|EST DBX|EC29170.5prime BLOC|complement(21420580..21420710,21421762..21422018,21422078..21422151) DBX|AM02277:contig1 BLOC|complement(21420484..21420710,21421762..21421953) DBX|GM32035.5prime BLOC|complement(21420063..21420504) DBX|bs75h09.y1 BLOC|complement(21421772..21422018,21422078..21422203) DBX|GM15871.5prime BLOC|complement(21420412..21420710,21421762..21422018,21422078..21422197) DBX|SD05690:contig1 BLOC|complement(21420033..21420710,21421762..21422018,21422078..21422185) DBX|SD18252.5prime BLOC|complement(21420445..21420710,21421762..21422018,21422078..21422179) DBX|GM27040.5prime BLOC|complement(21421806..21422018,21422078..21422163) DBX|EK257627.5prime BLOC|complement(21421668..21422018,21422078..21422160) DBX|GM32133.5prime BLOC|complement(21420616..21420710,21421762..21422018,21422078..21422159) DBX|SD22491.5prime BLOC|complement(21420446..21420710,21421762..21422018,21422078..21422159) DBX|AT10530.5prime BLOC|complement(21420515..21420710,21421762..21422018,21422078..21422152) } EVD { PRG|blastx_masked DB|aa_SPTR.dmel CLA|protein DT|20041008 DBX|Q8MSE0 BLOC|complement(21420187..21420489) DBX|Q8SYM2 BLOC|complement(21420187..21420588) DBX|Q9U4F4 BLOC|complement(21420187..21420711,21421757..21422017) DBX|Q8SY96 BLOC|complement(21420187..21420711,21421757..21422017) } EVD { PRG|blastx_masked DB|aa_SPTR.worm CLA|protein DT|20041008 DBX|Q21915 BLOC|complement(21420253..21420717,21421763..21421906) } EVD { PRG|blastx_masked DB|aa_SPTR.plant CLA|protein DT|20041008 DBX|Q9LIG6 BLOC|complement(21420271..21420729) DBX|Q9C8J2 BLOC|complement(21420280..21420711,21421757..21421897) DBX|Q94GV5 BLOC|complement(21420280..21420711,21421757..21421897) } EVD { PRG|blastx_masked DB|aa_SPTR.primate CLA|protein DT|20041008 DBX|Q7Z5B2 BLOC|complement(21420271..21420711,21421763..21421894) DBX|AAQ73784 BLOC|complement(21420271..21420711,21421763..21421894) DBX|Q7Z5B1 BLOC|complement(21420271..21420711,21421763..21421894) } EVD { PRG|promoter DB|dummy CLA|promoter DT|20041008 BLOC|complement(21421224..21421225) } EVD { PRG|blastx_masked DB|aa_SPTR.yeast CLA|protein DT|20041008 DBX|P32860 BLOC|complement(21420280..21420717) } VERS|4.3 } # EOR GADR { RETE|ID 1 FBan0017450 GID 1 FBgn0040028 GSYM 1 CG17450 CGSYM 1 CG17450 ARM 1 X CLOC 1 20A4-20A4 SCAF 1 AE003122 TRREC 2 AALEN 2 520 ID|FBan0017450 SYM|CG17450 GENSR { GSYM|CG17450 ID|FBgn0040028 } ARM|X SCAF|AE003122 BLOC|complement(21416771..21419534) CLOCC|20A4-20A4 SQLEN|2764 ID2|FBan0017450 EST|AT04250 |bs03b07 |AT13738 |AT21774 |bs72d03 |AT10218 |AT05348 |AT12456 |AT01320 |AT04396 |AT19190 |AT16426 |AT10047 |AT10265 |AT23121 |AT05035 |AT05036 |AT08547 |AT30761 |bs69e06 |AT05275 |bs75c09 |AT23117 |AT28511 |AT27715 |bs30e12 |AT29104 |AT15016 |AT28590 |GH11003 |GH25094 |LP17029 CDNA|LD08455 CMT|problem=true DT|20040809 TRREC { NAM|CG17450-RA SYN|FlyBase:FBtr0070056 |FlyBase:FBpp0070055 |GB_protein:AAG22461.3 |GB_protein:AAG22461.2 AANAM|CG17450-PA SQLEN|1707 (-) AALEN|520 BLOC|complement(21416771..21417308,21417472..21418059,21418183..21418763) CDS|complement(21416774..21417308,21417472..21418059,21418183..21418619) CMT|protein_id=AAG22461 DT|20040623 } TRREC { NAM|CG17450-RB SYN|FlyBase:FBtr0070057 |FlyBase:FBpp0070056 |GB_protein:AAN08998.2 |GB_protein:AAN08998.1 |FlyBase:FBgn0074543 |FlyBase Annotation IDs:GA14515 |Dpse\GA14515 AANAM|CG17450-PB SQLEN|1806 (-) AALEN|601 BLOC|complement(21416771..21417308,21417472..21418059,21418183..21418535, |21419208..21419534) CDS|complement(21416774..21417308,21417472..21418059,21418183..21418535, |21419208..21419534) CMT|protein_id=AAN08998 |comment=based on homology to the obsolete gene model for Dmel |CG17450-PB amino acids 237..601 in release 3.1 DT|20040623 } EVD { PRG|blastx_masked DB|aa_SPTR.othinv CLA|protein DT|20041008 DBX|Q26623 BLOC|complement(21416792..21417307,21417477..21418052) DBX|Q8T884 BLOC|complement(21416795..21417304,21417471..21418076) DBX|Q9U0E3 BLOC|complement(21416774..21417307,21417471..21418052,21418182..21418271) } EVD { PRG|sim4 DB|na_gadfly.dros.RELEASE2 CLA|mRNA DT|20041008 DBX|CT34184.2 BLOC|complement(21416771..21417328,21417472..21418059,21418183..21418535, |21419208..21419534) } EVD { PRG|genie_masked DB|dummy CLA|genie_masked DT|20041008 BLOC|complement(21416771..21417308,21417472..21418059,21418183..21418614, |21419161..21419534) } EVD { PRG|tblastx_masked DB|na_dbEST.insect CLA|EST DBX|CK533622 BLOC|complement(21416777..21417139) DBX|CK534227 BLOC|complement(21417020..21417307) DBX|BX616161 BLOC|complement(21416771..21416875,21416885..21417313,21417477..21417704) DBX|BP128100 BLOC|complement(21417471..21418058) DBX|CK534156 BLOC|complement(21417531..21418058) DBX|CK536409 BLOC|complement(21417795..21418058,21418182..21418553) } EVD { PRG|tblastxwrap_masked DB|na_scf_chunk_agambiae.fa CLA|DNA DT|20041008 DBX|AAAB01008846.1p73 BLOC|complement(21416774..21416998) DBX|AAAB01008846.1p73 BLOC|complement(21416999..21417139) DBX|AAAB01008807.1p38 BLOC|complement(21416798..21417298) DBX|AAAB01008846.1p73 BLOC|complement(21417128..21417310) DBX|AAAB01008846.1p73 BLOC|complement(21417471..21417599) DBX|AAAB01008846.1p73 BLOC|complement(21417576..21418058) DBX|AAAB01008846.1p73 BLOC|complement(21418182..21418478) } EVD { PRG|sim4 DB|na_dbEST.same.dmel CLA|EST DBX|GH11003.5prime BLOC|complement(21418203..21418751) DBX|GH25094.5prime BLOC|complement(21418183..21418753) DBX|LP17029.5prime BLOC|complement(21418016..21418059,21418183..21418763) } EVD { PRG|prosplign DB|aa_ncbi_other CLA|protein DT|20060124 DBX|NP_001028687 BLOC|complement(21417038..21417328,21417628..21417690) } EVD { PRG|sim4 DB|na_transcript.dmel.RELEASE32 CLA|mRNA DT|20041008 DBX|CG17450-RB.32 BLOC|complement(21416771..21417308,21417472..21418059,21418183..21418535, |21419208..21419534) DBX|CG17450-RA.32 BLOC|complement(21416771..21417308,21417472..21418059,21418183..21418763) } EVD { PRG|sim4 DB|na_transcript.dmel.RELEASE31 CLA|mRNA DT|20041008 DBX|CG17450-RA.31 BLOC|complement(21416771..21417308,21417472..21418059,21418183..21418763) DBX|CG17450-RB.31 BLOC|complement(21416771..21417308,21417472..21418059,21418183..21418535, |21419208..21419534) } EVD { PRG|sim4tandem DB|na_gb.dmel CLA|cDNA DT|20050823 DBX|LD08455 BLOC|complement(21416708..21417308,21417472..21418059,21418183..21418535, |21419208..21419596) } EVD { PRG|genscan_masked DB|dummy CLA|genscan_masked DT|20041008 BLOC|complement(21416771..21417308,21417472..21418059,21418183..21418493) } EVD { PRG|blastx_masked DB|aa_SPTR.insect CLA|protein DT|20041008 DBX|Q9BLD7 BLOC|complement(21416795..21417295,21417474..21417980) DBX|Q8I1F3 BLOC|complement(21416807..21417193,21417495..21418043) DBX|Q7PRZ5 BLOC|complement(21416774..21417172,21417177..21417299,21417486..21418058, |21418182..21418466) } EVD { PRG|blastx_masked DB|aa_SPTR.rodent CLA|protein DT|20041008 DBX|Q99JD2 BLOC|complement(21416795..21417208,21417471..21418052) DBX|Q9DAH3 BLOC|complement(21416774..21417304,21417471..21418115) DBX|AAP86970 BLOC|complement(21416774..21417307,21417471..21418052,21418182..21418265) } EVD { PRG|augustus DB|dummy CLA|augustus DT|20050713 BLOC|complement(21416771..21417308,21417472..21418059,21418183..21418614, |21419152..21419534) } EVD { PRG|tblastxwrap_masked DB|na_baylorf1_scfchunk.dpse CLA|so DT|20041008 DBX|Contig266_Contig3993-1 BLOC|complement(21416774..21417001) DBX|Contig3295_Contig8282-8 BLOC|complement(21416831..21417193) DBX|Contig3295_Contig8282-7 BLOC|complement(21416831..21417193) DBX|Contig7471_Contig6056-1 BLOC|complement(21416780..21417295) DBX|Contig266_Contig3993-1 BLOC|complement(21416999..21417325) DBX|Contig266_Contig3993-1 BLOC|complement(21417471..21418034) DBX|Contig266_Contig3993-1 BLOC|complement(21418416..21418595) DBX|Contig266_Contig3993-1 BLOC|complement(21419190..21419378) DBX|Contig266_Contig3993-1 BLOC|complement(21419418..21419534) } EVD { PRG|blastx_masked DB|aa_SPTR.othvert CLA|protein DT|20041008 DBX|Q9TTW3 BLOC|complement(21416792..21417208,21417471..21418052) DBX|Q7ZTQ3 BLOC|complement(21416804..21417202,21417489..21418052) DBX|Q7T0V0 BLOC|complement(21416774..21417307,21417471..21418052,21418182..21418265) } EVD { PRG|sim4 DB|na_dbEST.diff.dmel CLA|EST DBX|AT04250.5prime BLOC|complement(21418386..21418773) DBX|bs03b07.y1 BLOC|complement(21418425..21418770) DBX|AT13738.5prime BLOC|complement(21418016..21418059,21418183..21418767) DBX|AT21774.5prime BLOC|complement(21418266..21418764) DBX|bs72d03.y1 BLOC|complement(21418277..21418764) DBX|AT10218.5prime BLOC|complement(21417938..21418059,21418183..21418763) DBX|AT05348.5prime BLOC|complement(21417910..21418059,21418183..21418763) DBX|AT12456.5prime BLOC|complement(21418016..21418059,21418183..21418759) DBX|AT01320:contig1 BLOC|complement(21417937..21418059,21418183..21418758) DBX|AT01320:contig2 BLOC|complement(21416781..21417311) DBX|AT04396.5prime BLOC|complement(21417842..21418059,21418183..21418754) DBX|AT19190.5prime BLOC|complement(21418032..21418059,21418183..21418754) DBX|AT16426.5prime BLOC|complement(21418186..21418752) DBX|AT10047.5prime BLOC|complement(21418005..21418059,21418183..21418751) DBX|AT10265.5prime BLOC|complement(21417986..21418059,21418183..21418751) DBX|AT23121.5prime BLOC|complement(21418229..21418745) DBX|AT05035.5prime BLOC|complement(21418201..21418745) DBX|AT05036.5prime BLOC|complement(21418295..21418745) DBX|AT08547.5prime BLOC|complement(21417997..21418059,21418183..21418745) DBX|AT30761.5prime BLOC|complement(21418002..21418059,21418183..21418741) DBX|bs69e06.y1 BLOC|complement(21418017..21418059,21418183..21418721) DBX|AT05275.5prime BLOC|complement(21417775..21418059,21418183..21418587) DBX|bs75c09.y1 BLOC|complement(21418301..21418582) DBX|AT23117.5prime BLOC|complement(21417662..21418059,21418183..21418486) DBX|AT28511.5prime BLOC|complement(21417775..21418059,21418183..21418486) DBX|AT27715.5prime BLOC|complement(21417662..21418059,21418183..21418406) DBX|bs30e12.y1 BLOC|complement(21417678..21418059,21418183..21418374) DBX|AT29104.5prime BLOC|complement(21417606..21418059,21418183..21418273) DBX|AT15016.5prime BLOC|complement(21417604..21418059,21418183..21418259) DBX|AT28590.5prime BLOC|complement(21416833..21417308,21417472..21417546) } EVD { PRG|blastx_masked DB|aa_SPTR.dmel CLA|protein DT|20041008 DBX|Q9W1V2 BLOC|complement(21416807..21417193) DBX|Q8T3Z0 BLOC|complement(21416801..21417280,21417477..21418055) DBX|Q9V3M9 BLOC|complement(21416780..21417295,21417483..21418064) DBX|Q9I805 BLOC|complement(21416774..21417307,21417471..21418058,21418182..21418619) DBX|Q8I044 BLOC|complement(21416774..21417307,21417471..21418058,21418182..21418619) DBX|Q8I0K9 BLOC|complement(21416774..21417307,21417471..21418058,21418182..21418535, |21419208..21419534) DBX|Q8IRZ1 BLOC|complement(21416774..21417307,21417471..21418058,21418182..21418535, |21419208..21419534) } EVD { PRG|blastx_masked DB|aa_SPTR.primate CLA|protein DT|20041008 DBX|Q8WW24 BLOC|complement(21416795..21417307,21417471..21418115) DBX|Q9BXF9 BLOC|complement(21416795..21417307,21417471..21418115) DBX|Q96M29 BLOC|complement(21416795..21417307,21417474..21418052,21418170..21418265, |21418341..21418433) } VERS|4.3 } # EOR GADR { RETE|ID 1 FBan0014476 GID 1 FBgn0027588 GSYM 1 CG14476 CGSYM 1 CG14476 ARM 1 X CLOC 1 20A4-20A4 SCAF 1 AE003122 TRREC 5 AALEN 5 924 ID|FBan0014476 SYM|CG14476 GENSR { GSYM|CG14476 ID|FBgn0027588 } ARM|X SCAF|AE003122 BLOC|complement(21411276..21415943) CLOCC|20A4-20A4 SQLEN|4668 GO|polysaccharide metabolism ; GO:0005976 |alpha-glucosidase II complex ; GO:0017177 |alpha-glucosidase activity ; GO:0004558 ID2|FBan0014476 SYN|glucosidase II |BcDNA:GH04962 |clot#312 EST|RH27528 |RH63107 |RH34592 |RE32730 |AT23468 |AT25723 |AT17916 |SD15146 |SD07951 |AT26887 |RE17956 |RE42372 |LD06673 |RE25245 |LP12741 |LP02110 |GH10988 |LD42044 |GH20850 |GH19575 |LD33671 |LD30317 |RH70247 |AT12136 |SD15442 |SD09089 |AT30273 |AT05860 |AT11578 |AT01393 |AT18769 |AT04952 |AT21255 |RE66122 |RE58190 |RE37542 |RE33562 |RE23535 |LD06588 |GH07169 |RE09638 |LD32560 |RE04038 |AT29193 |EK257737 |SD02301 |AT14190 |AT31613 |AT29816 |AT03337 |AT24064 |EK241117 |ESG012d |RE04026 |LD03638 |GH04962 |RE68196 |RE67071 |LD40328 |RE13736 |LD10259 |RE56065 |RE29012 |ESG014d |EK160626 |EK241356 |EK221526 |SD15038 |AT22188 |SD02169 |AT27887 |SD04480 |SD05581 |RE33835 |RE75102 |RE70105 |RE63535 |LD23438 |LP07117 |RE65208 |RE68016 |RE44126 |RE71319 |EK055109 |SD07327 |EK265509 |EK029338 |EK244451 |EK228835 |EK186318 |AT26702 |AT26726 |AT25753 |RH48234 |RH60836 |RH46621 |RH73376 |RH11086 |RH05071 |RH04430 |RH25949 |RH07984 |RH06469 |RH06444 |RH05881 |RE51027 |LD32922 |LD31250 |LD22961 |LD12017 |GH16079 |GH22656 |GH18477 |EN10344 |AT05464 |EK052137 |EK064528 |AT15634 |CK00212 |EN08302 |HL02095 |GH04487 |GH10940 |LD34716 |LD13850 |LD42873 |LP19192 |RE09074 |RE67162 |RE65024 |RE64407 |RE63772 |RE63591 |GH22829 |GH27318 |LP05667 |LD08562 |LD33649 |LD05562 |HL02659 |LD39179 |RE40866 |GH14945 |RE21550 |LP16117 |RE13388 |RH63857 |RH55153 |RH32414 CDNA|GH04962 CMT|comment=EST data support existence of multiple transcripts due |to variable use of 5' exons DT|20040809 TRREC { NAM|CG14476-RA SYN|FlyBase:FBtr0070060 |FlyBase:FBpp0070059 |GB_protein:AAG22460.1 AANAM|CG14476-PA SQLEN|3144 (-) AALEN|924 BLOC|complement(21411278..21411950,21412020..21413505,21413657..21414406, |21415139..21415268,21415754..21415858) CDS|complement(21411522..21411950,21412020..21413505,21413657..21414406, |21415139..21415245) CMT|protein_id=AAG22460 DT|20020625 } TRREC { NAM|CG14476-RE SYN|FlyBase:FBtr0070061 |FlyBase:FBpp0070060 |GB_protein:AAN08997.1 AANAM|CG14476-PE SQLEN|3264 (-) AALEN|924 BLOC|complement(21411276..21411950,21412020..21413505,21413657..21414406, |21415139..21415268,21415390..21415612) CDS|complement(21411522..21411950,21412020..21413505,21413657..21414406, |21415139..21415245) CMT|protein_id=AAN08997 DT|20020625 } TRREC { NAM|CG14476-RC SYN|FlyBase:FBtr0070059 |FlyBase:FBpp0070058 |GB_protein:AAN08995.1 AANAM|CG14476-PC SQLEN|3089 (-) AALEN|924 BLOC|complement(21411276..21411950,21412020..21413505,21413657..21414406, |21415139..21415268,21415828..21415875) CDS|complement(21411522..21411950,21412020..21413505,21413657..21414406, |21415139..21415245) CMT|protein_id=AAN08995 DT|20020625 } TRREC { NAM|CG14476-RD SYN|FlyBase:FBtr0070062 |FlyBase:FBpp0070061 |GB_protein:AAN08996.1 AANAM|CG14476-PD SQLEN|3138 (-) AALEN|924 BLOC|complement(21411276..21411950,21412020..21413505,21413657..21414406, |21415139..21415365) CDS|complement(21411522..21411950,21412020..21413505,21413657..21414406, |21415139..21415245) CMT|protein_id=AAN08996 DT|20020625 } TRREC { NAM|CG14476-RB SYN|FlyBase:FBtr0070058 |FlyBase:FBpp0070057 |GB_protein:AAF45432.1 |FlyBase:FBgn0073049 |FlyBase Annotation IDs:GA13011 |Dpse\GA13011 AANAM|CG14476-PB SQLEN|3135 (-) AALEN|924 BLOC|complement(21411276..21411950,21412020..21413505,21413657..21414406, |21415139..21415268,21415850..21415943) CDS|complement(21411522..21411950,21412020..21413505,21413657..21414406, |21415139..21415245) CMT|protein_id=AAF45432 |comment=Range of putative ortholog from tblastn was extended |to cover the gene prediction DT|20020625 } EVD { PRG|blastx_masked DB|aa_SPTR.othinv CLA|protein DT|20041008 DBX|Q8NIY3 BLOC|complement(21411654..21411971,21411981..21413531,21413659..21414189) DBX|Q94502 BLOC|complement(21411528..21411953,21411993..21413555,21413659..21414282) DBX|Q7Q4V0 BLOC|complement(21411525..21411974,21411990..21413495,21413656..21414408) } EVD { PRG|sim4 DB|na_gadfly.dros.RELEASE2 CLA|mRNA DT|20041008 DBX|CT43431.2 BLOC|complement(21411271..21411950,21412020..21413505,21413657..21414406, |21415139..21415268,21415754..21415865) DBX|CT34183.2 BLOC|complement(21411276..21411950,21412020..21413505,21413657..21414406, |21415139..21415268,21415850..21415918) } EVD { PRG|repeatmasker DB|dummy CLA|RepeatMasker:dummy DT|20041008 DBX|U66884 BLOC|complement(21414800..21415056) } EVD { PRG|genie_masked DB|dummy CLA|genie_masked DT|20041008 BLOC|complement(21411519..21411950,21412020..21413505,21413657..21414406, |21415139..21415245) } EVD { PRG|tblastx_masked DB|na_dbEST.insect CLA|EST DBX|BX560839 BLOC|complement(21412371..21412928) DBX|BX551094 BLOC|complement(21412587..21413129) DBX|BM611210 BLOC|complement(21412602..21413246) DBX|BM589149 BLOC|complement(21413656..21414246) DBX|BP125162 BLOC|complement(21413782..21414294) DBX|BM641624 BLOC|complement(21413860..21414408) } EVD { PRG|tblastxwrap_masked DB|na_scf_chunk_agambiae.fa CLA|DNA DT|20041008 DBX|AAAB01008963.1p9 BLOC|complement(21411750..21411953) DBX|AAAB01008963.1p9 BLOC|complement(21412017..21412670) DBX|AAAB01008963.1p9 BLOC|complement(21412659..21413438) DBX|AAAB01008963.1p9 BLOC|complement(21413656..21413766) DBX|AAAB01008963.1p9 BLOC|complement(21413758..21413979) } EVD { PRG|sim4 DB|na_dbEST.same.dmel CLA|EST DBX|RH27528.5prime BLOC|complement(21414123..21414406,21415139..21415268,21415850..21415940) DBX|RH63107.5prime BLOC|complement(21414097..21414406,21415139..21415268,21415850..21415940) DBX|RH34592.5prime BLOC|complement(21414123..21414406,21415139..21415268,21415850..21415940) DBX|RE32730.5prime BLOC|complement(21414008..21414406,21415139..21415268,21415850..21415940) DBX|RE17956.5prime BLOC|complement(21414222..21414406,21415139..21415268,21415850..21415940) DBX|RE42372.5prime BLOC|complement(21414008..21414406,21415139..21415268,21415850..21415943) DBX|LD06673.5prime BLOC|complement(21413979..21414416,21415149..21415219) DBX|RE25245.5prime BLOC|complement(21414123..21414406,21415139..21415268,21415850..21415943) DBX|LP12741.5prime BLOC|complement(21413811..21414406,21415139..21415257) DBX|LP02110.5prime BLOC|complement(21413936..21414406,21415139..21415264) DBX|GH10988.5prime BLOC|complement(21413968..21414406,21415139..21415264) DBX|LD42044.5prime BLOC|complement(21414007..21414406,21415139..21415268) DBX|GH20850.5prime BLOC|complement(21414277..21414406,21415139..21415268) DBX|GH19575.5prime BLOC|complement(21414006..21414406,21415139..21415268) DBX|LD33671.5prime BLOC|complement(21413756..21414406,21415139..21415268) DBX|LD30317.5prime BLOC|complement(21413854..21414406,21415139..21415268) DBX|RH70247.5prime BLOC|complement(21414068..21414406,21415139..21415268) DBX|RE66122.5prime BLOC|complement(21413964..21414406,21415139..21415268) DBX|RE58190.5prime BLOC|complement(21414008..21414406,21415139..21415268) DBX|RE37542.5prime BLOC|complement(21414008..21414406,21415139..21415268) DBX|RE33562.5prime BLOC|complement(21413891..21414406,21415139..21415268) DBX|RE23535.5prime BLOC|complement(21414127..21414406,21415139..21415268) DBX|LD06588.5prime BLOC|complement(21413747..21414406,21415139..21415270) DBX|GH07169.5prime BLOC|complement(21413990..21414406,21415139..21415270) DBX|RE09638.5prime BLOC|complement(21414206..21414406,21415139..21415270) DBX|LD32560.5prime BLOC|complement(21413757..21414406,21415139..21415271) DBX|RE04038.5prime BLOC|complement(21414287..21414406,21415139..21415268,21415390..21415612) DBX|RE04026.5prime BLOC|complement(21415189..21415268,21415390..21415612) DBX|LD03638.5prime BLOC|complement(21414017..21414406,21415139..21415268,21415828..21415852) DBX|GH04962:contig2 BLOC|complement(21411276..21411810) DBX|GH04962:contig1 BLOC|complement(21413845..21414406,21415139..21415268,21415754..21415858) DBX|RE68196.5prime BLOC|complement(21414034..21414406,21415139..21415268,21415850..21415867) DBX|RE67071.5prime BLOC|complement(21414293..21414406,21415139..21415268,21415850..21415867) DBX|LD40328.5prime BLOC|complement(21414012..21414406,21415139..21415268,21415850..21415873) DBX|RE13736.5prime BLOC|complement(21414006..21414406,21415139..21415268,21415828..21415875) DBX|LD10259.5prime BLOC|complement(21413733..21414406,21415139..21415268,21415850..21415886) DBX|RE56065.5prime BLOC|complement(21414115..21414406,21415139..21415268,21415850..21415890) DBX|RE29012.5prime BLOC|complement(21414058..21414406,21415139..21415268,21415850..21415890) DBX|RE33835.5prime BLOC|complement(21414007..21414406,21415139..21415268,21415850..21415892) DBX|RE75102.5prime BLOC|complement(21413936..21414406,21415139..21415268,21415850..21415896) DBX|RE70105.5prime BLOC|complement(21414042..21414406,21415139..21415268,21415850..21415896) DBX|RE63535.5prime BLOC|complement(21414077..21414406,21415139..21415268,21415850..21415896) DBX|LD23438.5prime BLOC|complement(21413930..21414406,21415139..21415268,21415850..21415898) DBX|LP07117.5prime BLOC|complement(21413992..21414406,21415139..21415268,21415850..21415899) DBX|RE65208.5prime BLOC|complement(21414007..21414406,21415139..21415268,21415850..21415899) DBX|RE68016.5prime BLOC|complement(21414016..21414406,21415139..21415268,21415850..21415905) DBX|RE44126.5prime BLOC|complement(21414163..21414406,21415139..21415268,21415850..21415905) DBX|RE71319.5prime BLOC|complement(21414335..21414406,21415139..21415268,21415850..21415906) DBX|RH48234.5prime BLOC|complement(21414008..21414406,21415139..21415268,21415850..21415909) DBX|RH60836.5prime BLOC|complement(21413991..21414406,21415139..21415268,21415850..21415910) DBX|RH46621.5prime BLOC|complement(21414013..21414406,21415139..21415268,21415850..21415910) DBX|RH73376.5prime BLOC|complement(21413936..21414406,21415139..21415268,21415850..21415910) DBX|RH11086.5prime BLOC|complement(21414095..21414406,21415139..21415268,21415850..21415910) DBX|RH05071.5prime BLOC|complement(21414053..21414406,21415139..21415268,21415850..21415910) DBX|RH04430.5prime BLOC|complement(21414064..21414406,21415139..21415268,21415850..21415910) DBX|RH25949.5prime BLOC|complement(21414007..21414406,21415139..21415268,21415850..21415910) DBX|RH07984.5prime BLOC|complement(21413999..21414406,21415139..21415268,21415850..21415910) DBX|RH06469.5prime BLOC|complement(21414100..21414406,21415139..21415268,21415850..21415910) DBX|RH06444.5prime BLOC|complement(21414094..21414406,21415139..21415268,21415850..21415910) DBX|RH05881.5prime BLOC|complement(21414123..21414406,21415139..21415268,21415850..21415910) DBX|RE51027.5prime BLOC|complement(21414008..21414406,21415139..21415268,21415850..21415911) DBX|LD32922.5prime BLOC|complement(21414121..21414406,21415139..21415268,21415850..21415912) DBX|LD31250.5prime BLOC|complement(21413848..21414406,21415139..21415268,21415850..21415912) DBX|LD22961.5prime BLOC|complement(21413991..21414406,21415139..21415268,21415850..21415912) DBX|LD12017.5prime BLOC|complement(21414017..21414406,21415139..21415268,21415850..21415913) DBX|GH16079.5prime BLOC|complement(21414059..21414406,21415139..21415268,21415850..21415915) DBX|GH22656.5prime BLOC|complement(21414007..21414406,21415139..21415268,21415850..21415918) DBX|GH18477.5prime BLOC|complement(21414012..21414406,21415139..21415268,21415850..21415918) DBX|HL02095.3prime BLOC|complement(21411276..21411950,21412020..21412109) DBX|GH04487.5prime BLOC|complement(21413961..21414406,21415139..21415268,21415850..21415918) DBX|GH10940.3prime BLOC|complement(21411276..21411950,21412020..21412116) DBX|LD34716.5prime BLOC|complement(21413890..21414406,21415139..21415268,21415850..21415918) DBX|LD13850.5prime BLOC|complement(21411573..21411950,21412020..21412266) DBX|LD42873.5prime BLOC|complement(21414224..21414406,21415139..21415268,21415850..21415923) DBX|LP19192.5prime BLOC|complement(21414009..21414406,21415139..21415268,21415850..21415933) DBX|RE09074.5prime BLOC|complement(21414077..21414406,21415139..21415268,21415850..21415934) DBX|RE67162.5prime BLOC|complement(21414193..21414406,21415139..21415268,21415850..21415935) DBX|RE65024.5prime BLOC|complement(21414014..21414406,21415139..21415268,21415850..21415935) DBX|RE64407.5prime BLOC|complement(21414126..21414406,21415139..21415268,21415850..21415935) DBX|RE63772.5prime BLOC|complement(21414025..21414406,21415139..21415268,21415850..21415935) DBX|RE63591.5prime BLOC|complement(21414127..21414406,21415139..21415268,21415850..21415935) DBX|GH22829.5prime BLOC|complement(21411589..21411950,21412020..21412279) DBX|GH27318.5prime BLOC|complement(21411779..21411950,21412020..21412435) DBX|LP05667.5prime BLOC|complement(21412080..21412722) DBX|LD08562.5prime BLOC|complement(21412237..21413026) DBX|LD33649.5prime BLOC|complement(21412496..21413203) DBX|LD05562.5prime BLOC|complement(21412662..21413208) DBX|HL02659:contig2 BLOC|complement(21411276..21411882) DBX|HL02659:contig1 BLOC|complement(21412769..21413333) DBX|LD39179.5prime BLOC|complement(21413434..21413505,21413657..21414120) DBX|RE40866.5prime BLOC|complement(21414008..21414406,21415139..21415268,21415850..21415935) DBX|GH14945.5prime BLOC|complement(21413430..21413505,21413657..21414152) DBX|RE21550.5prime BLOC|complement(21413991..21414406,21415139..21415268,21415850..21415935) DBX|LP16117.5prime BLOC|complement(21413737..21414397) DBX|RE13388.5prime BLOC|complement(21413982..21414406,21415139..21415268,21415850..21415935) DBX|RH63857.5prime BLOC|complement(21414008..21414406,21415139..21415268,21415850..21415940) DBX|RH55153.5prime BLOC|complement(21413991..21414406,21415139..21415268,21415850..21415940) DBX|RH32414.5prime BLOC|complement(21414070..21414406,21415139..21415268,21415850..21415940) } EVD { PRG|prosplign DB|aa_ncbi_other CLA|protein DT|20060124 DBX|NP_508105 BLOC|complement(21411528..21411950,21412020..21413505,21413657..21413952, |21414004..21414384,21414636..21414698) } EVD { PRG|sim4 DB|na_transcript.dmel.RELEASE32 CLA|mRNA DT|20041008 DBX|CG14476-RD.32 BLOC|complement(21411276..21411950,21412020..21413505,21413657..21414406, |21415139..21415365) DBX|CG14476-RE.32 BLOC|complement(21411276..21411950,21412020..21413505,21413657..21414406, |21415139..21415268,21415390..21415612) DBX|CG14476-RA.32 BLOC|complement(21411278..21411950,21412020..21413505,21413657..21414406, |21415139..21415268,21415754..21415858) DBX|CG14476-RC.32 BLOC|complement(21411276..21411950,21412020..21413505,21413657..21414406, |21415139..21415268,21415828..21415875) DBX|CG14476-RB.32 BLOC|complement(21411276..21411950,21412020..21413505,21413657..21414406, |21415139..21415268,21415850..21415943) } EVD { PRG|sim4 DB|na_transcript.dmel.RELEASE31 CLA|mRNA DT|20041008 DBX|CG14476-RD.31 BLOC|complement(21411276..21411950,21412020..21413505,21413657..21414406, |21415139..21415365) DBX|CG14476-RE.31 BLOC|complement(21411276..21411950,21412020..21413505,21413657..21414406, |21415139..21415268,21415390..21415612) DBX|CG14476-RA.31 BLOC|complement(21411278..21411950,21412020..21413505,21413657..21414406, |21415139..21415268,21415754..21415858) DBX|CG14476-RC.31 BLOC|complement(21411276..21411950,21412020..21413505,21413657..21414406, |21415139..21415268,21415828..21415875) DBX|CG14476-RB.31 BLOC|complement(21411276..21411950,21412020..21413505,21413657..21414406, |21415139..21415268,21415850..21415943) } EVD { PRG|sim4tandem DB|na_gb.dmel CLA|cDNA DT|20050823 DBX|GH04962 BLOC|complement(21411278..21411950,21412020..21413505,21413657..21414406, |21415139..21415268,21415754..21415865) } EVD { PRG|genscan_masked DB|dummy CLA|genscan_masked DT|20041008 BLOC|complement(21411519..21411950,21412020..21413505,21413657..21414406, |21415139..21415245) } EVD { PRG|blastx_masked DB|aa_SPTR.rodent CLA|protein DT|20041008 DBX|Q80U81 BLOC|complement(21411531..21411977,21411990..21413498,21413659..21413940) DBX|O08794 BLOC|complement(21411531..21411977,21411990..21413498,21413659..21413940, |21414010..21414408) DBX|Q8BHN3 BLOC|complement(21411531..21411977,21411990..21413498,21413659..21414408) } EVD { PRG|augustus DB|dummy CLA|augustus DT|20050713 BLOC|complement(21411519..21411950,21412020..21413505,21413657..21414406, |21415139..21415245) } EVD { PRG|tblastxwrap_masked DB|na_baylorf1_scfchunk.dpse CLA|so DT|20041008 DBX|Contig266_Contig3993-1 BLOC|complement(21411525..21411950) DBX|Contig266_Contig3993-1 BLOC|complement(21412017..21413507) DBX|Contig266_Contig3993-1 BLOC|complement(21413656..21413967) DBX|Contig266_Contig3993-1 BLOC|complement(21413956..21414405) DBX|Contig266_Contig3993-1 BLOC|complement(21415138..21415263) } EVD { PRG|blastx_masked DB|aa_SPTR.othvert CLA|protein DT|20041008 DBX|Q95LM6 BLOC|complement(21412161..21412880) DBX|Q9BE70 BLOC|complement(21411531..21411950,21411921..21413522) DBX|P79403 BLOC|complement(21411531..21411977,21411990..21413519,21413659..21414408) } EVD { PRG|sim4 DB|na_dbEST.diff.dmel CLA|EST DBX|AT23468.5prime BLOC|complement(21414337..21414406,21415139..21415314) DBX|AT25723.5prime BLOC|complement(21413767..21414406,21415139..21415286) DBX|AT17916.5prime BLOC|complement(21413905..21414406,21415139..21415314) DBX|SD15146.5prime BLOC|complement(21413848..21414406,21415139..21415268) DBX|SD07951.5prime BLOC|complement(21414007..21414406,21415139..21415270) DBX|AT26887.5prime BLOC|complement(21414032..21414406,21415139..21415271) DBX|AT12136.5prime BLOC|complement(21413984..21414406,21415139..21415331) DBX|SD15442.5prime BLOC|complement(21413857..21414406,21415139..21415268) DBX|SD09089.5prime BLOC|complement(21413987..21414406,21415139..21415271) DBX|AT30273.5prime BLOC|complement(21413987..21414406,21415139..21415331) DBX|AT05860.5prime BLOC|complement(21413827..21414406,21415139..21415331) DBX|AT11578.5prime BLOC|complement(21414094..21414406,21415139..21415365) DBX|AT01393:contig2 BLOC|complement(21411508..21411518,21411564..21411950,21412020..21412168) DBX|AT01393:contig1 BLOC|complement(21414002..21414406,21415139..21415331) DBX|AT18769.5prime BLOC|complement(21414028..21414406,21415139..21415336) DBX|AT04952.5prime BLOC|complement(21414094..21414406,21415139..21415336) DBX|AT21255.5prime BLOC|complement(21414073..21414406,21415139..21415271) DBX|AT29193.5prime BLOC|complement(21414118..21414406,21415139..21415314) DBX|EK257737.5prime BLOC|complement(21414116..21414406,21415139..21415268) DBX|SD02301.5prime BLOC|complement(21414050..21414406,21415139..21415270) DBX|AT14190.5prime BLOC|complement(21413904..21414406,21415139..21415314) DBX|AT31613.5prime BLOC|complement(21413886..21414406,21415139..21415268) DBX|AT29816.5prime BLOC|complement(21415149..21415337) DBX|AT03337.5prime BLOC|complement(21413904..21414406,21415139..21415300) DBX|AT24064.5prime BLOC|complement(21414120..21414406,21415139..21415268) DBX|EK241117.5prime BLOC|complement(21412347..21412603) DBX|ESG012d.E21_E01.3prime BLOC|complement(21411410..21411950,21412020..21412107) DBX|ESG014d.E21_D01.3prime BLOC|complement(21411271..21411950,21412020..21412066) DBX|EK160626.5prime BLOC|complement(21411461..21411822) DBX|EK241356.5prime BLOC|complement(21411376..21411791) DBX|EK221526.5prime BLOC|complement(21411448..21411631) DBX|SD15038.5prime BLOC|complement(21415149..21415268,21415850..21415923) DBX|AT22188.5prime BLOC|complement(21413884..21414406,21415139..21415268,21415850..21415904) DBX|SD02169.5prime BLOC|complement(21414059..21414406,21415139..21415268,21415850..21415890) DBX|AT27887.5prime BLOC|complement(21413946..21414406,21415139..21415268,21415850..21415885) DBX|SD04480.5prime BLOC|complement(21414127..21414406,21415139..21415268,21415850..21415869) DBX|SD05581.5prime BLOC|complement(21413887..21414406,21415139..21415268,21415850..21415866) DBX|EK055109.5prime BLOC|complement(21415307..21415735) DBX|SD07327.5prime BLOC|complement(21414050..21414406,21415139..21415257) DBX|EK265509.5prime BLOC|complement(21413963..21414406,21415139..21415194) DBX|EK029338.5prime BLOC|complement(21413673..21413980) DBX|EK244451.5prime BLOC|complement(21413687..21413980) DBX|EK228835.5prime BLOC|complement(21413705..21413880) DBX|EK186318.5prime BLOC|complement(21413187..21413505,21413657..21413820) DBX|AT26702.5prime BLOC|complement(21412982..21413505,21413657..21413806) DBX|AT26726.5prime BLOC|complement(21413429..21413505,21413657..21413806) DBX|AT25753.5prime BLOC|complement(21413443..21413505,21413657..21413767) DBX|EN10344.5prime BLOC|complement(21413047..21413341) DBX|AT05464.5prime BLOC|complement(21412645..21413285) DBX|EK052137.5prime BLOC|complement(21412928..21413250) DBX|EK064528.5prime BLOC|complement(21412679..21413250) DBX|AT15634.5prime BLOC|complement(21412522..21413110) DBX|CK00212:contig1 BLOC|complement(21412459..21412985) DBX|CK00212:contig2 BLOC|complement(21411276..21411882) DBX|EN08302.5prime BLOC|complement(21412561..21412958) } EVD { PRG|blastx_masked DB|aa_SPTR.dmel CLA|protein DT|20041008 DBX|Q9Y146 BLOC|complement(21411522..21411974,21412017..21413504,21413656..21414408, |21415138..21415245) } EVD { PRG|blastx_masked DB|aa_SPTR.worm CLA|protein DT|20041008 DBX|Q20239 BLOC|complement(21411525..21411947,21412032..21413531,21413659..21413904) DBX|Q9U3F8 BLOC|complement(21411525..21411947,21412032..21413531,21413659..21413904) DBX|O17352 BLOC|complement(21411528..21413531,21413662..21413910,21414004..21414408) } EVD { PRG|blastx_masked DB|aa_SPTR.plant CLA|protein DT|20041008 DBX|Q93Y12 BLOC|complement(21412122..21413333) DBX|Q9FN05 BLOC|complement(21411531..21411950,21412002..21413531,21413656..21413898, |21413998..21414252) DBX|CAE54480 BLOC|complement(21411531..21412061,21412080..21413531,21413656..21414330) } EVD { PRG|blastx_masked DB|aa_SPTR.primate CLA|protein DT|20041008 DBX|AAH65266 BLOC|complement(21411531..21411977,21411990..21413519,21413659..21414252) DBX|Q14697 BLOC|complement(21411531..21411977,21411990..21413519,21413659..21414408) DBX|Q9P0X0 BLOC|complement(21411531..21411977,21411990..21413519,21413659..21413940, |21414010..21414408) } EVD { PRG|blastx_masked DB|aa_SPTR.yeast CLA|protein DT|20041008 DBX|P38138 BLOC|complement(21411537..21411953,21412122..21413495,21413665..21413898, |21413983..21414105) } VERS|4.3 } # EOR GADR { RETE|ID 1 FBan0018273 GID 1 FBgn0029525 GSYM 1 CG18273 CGSYM 1 CG18273 ARM 1 X CLOC 1 1B4-1B5 SCAF 1 AE003417 TRREC 1 AALEN 1 1377 ID|FBan0018273 SYM|CG18273 GENSR { GSYM|CG18273 ID|FBgn0029525 } ARM|X SCAF|AE003417 BLOC|complement(339620..344364) CLOCC|1B4-1B5 SQLEN|4745 ID2|FBan0018273 |FBgn0023533 SYN|EG:171D11.6 |CG13372 EST|SD06521 |EK085228 |SD05422 |EK270808 |LD13207 |LD29104 |LD05591 |GH23588 |LD32243 |LD04586 |LD21943 |EK290407 |SD07110 |SD04843 CDNA|LD21943 AFFY|153553_at CMT|comment=Repetitive region of the genome. See FBrf0133224 |comment=DGC clone LD05591 appears problematic: incomplete CDS DT|20031201 TRREC { NAM|CG18273-RA SYN|FlyBase:FBtr0070094 |CG18273-RB |FlyBase:FBpp0070089 |GB_protein:AAG22361.3 |GB_protein:AAG22361.2 |FlyBase:FBgn0074895 |FlyBase Annotation IDs:GA14868 |Dpse\GA14868 AANAM|CG18273-PA SQLEN|4282 (-) AALEN|1377 BLOC|complement(339620..339867,340090..340650,340706..341068,341132..341787, |341850..344225,344287..344364) CDS|complement(339709..339867,340090..340650,340706..341068,341132..341787, |341850..344225,344287..344302) CMT|comment=based on homology to the obsolete gene model for Dmel |CG18273-PA amino acids 6..1271 in release 3.1 DT|20030221 } EVD { PRG|sim4 DB|na_transcript.dmel.RELEASE31 CLA|mRNA DT|20041008 DBX|CG18273-RA.31 BLOC|complement(339604..339867,340090..340650,340706..341068,341132..341787, |341850..344225,344287..344364) } EVD { PRG|genscan_masked DB|dummy CLA|genscan_masked DT|20041008 BLOC|complement(328656..328754,328948..329383,329464..329673,329742..329911, |329978..330527,330586..331022,331132..331328,331520..331902,331980..332135, |332591..333114,334545..334738,335030..335251,335421..335574,336568..336719, |337082..337269,337735..337991,338051..338334,338424..338436,339056..339248, |339710..339867,340090..340650,340706..341068,341132..341787,341850..344225, |344287..344302) } EVD { PRG|sim4 DB|na_gadfly.dros.RELEASE2 CLA|mRNA DT|20041008 DBX|CT32701.2 BLOC|complement(337006..337307,340706..341068,341132..341787,341850..344225, |344287..344361) DBX|CT41446.2 BLOC|complement(339620..339867,340090..340650,340706..341068,343729..343935) DBX|CT40992.2 BLOC|complement(337024..337307,340706..341068,341132..341787,341850..343931, |344308..344358) } EVD { PRG|prosplign DB|aa_ncbi_dmel CLA|protein DT|20060123 DBX|AAV36989 BLOC|complement(339709..339867,340090..340650,340706..341068,341132..341787, |341850..344225,344287..344302) } EVD { PRG|augustus DB|dummy CLA|augustus DT|20050713 BLOC|complement(339706..339867,340090..340650,340706..341068,341132..341787, |341850..344225,344287..344302) } EVD { PRG|genie_masked DB|dummy CLA|genie_masked DT|20041008 BLOC|complement(339706..339867,340090..340650,340706..341068,341132..341787, |341850..344225,344287..344302) } EVD { PRG|blastx_masked DB|aa_SPTR.othvert CLA|protein DT|20041008 DBX|P05185 BLOC|complement(340865..341251) DBX|Q9GMC7 BLOC|complement(340865..341251) } EVD { PRG|tblastxwrap_masked DB|na_baylorf1_scfchunk.dpse CLA|so DT|20041008 DBX|Contig7446_Contig2444-16 BLOC|complement(343801..344076) DBX|Contig7446_Contig2444-16 BLOC|complement(344083..344217) DBX|Contig7446_Contig2444-16 BLOC|complement(339709..339870) DBX|Contig7446_Contig2444-16 BLOC|complement(340087..340566) DBX|Contig7446_Contig2444-16 BLOC|complement(340700..340906) DBX|Contig7446_Contig2444-16 BLOC|complement(340925..341068) DBX|Contig7446_Contig2444-16 BLOC|complement(341411..341788) DBX|Contig7446_Contig2444-16 BLOC|complement(342328..342474) DBX|Contig7446_Contig2444-16 BLOC|complement(342475..342924) DBX|Contig7446_Contig2444-16 BLOC|complement(343012..343359) DBX|Contig7446_Contig2444-16 BLOC|complement(343429..343773) } EVD { PRG|blastx_masked DB|aa_SPTR.dmel CLA|protein DT|20041008 DBX|Q9I800 BLOC|complement(340300..340551,340707..340745,340820..340879) DBX|Q9VZA7 BLOC|complement(343066..343131) DBX|Q9I7Z8 BLOC|complement(339709..339876,340087..340644,340676..341068,341129..341797, |341851..343923) DBX|Q7YZA6 BLOC|complement(340820..341068,343672..343923) DBX|Q9W5F9 BLOC|complement(343660..343923) DBX|Q86B66 BLOC|complement(340061..340168,340147..340311,340820..341068,343672..343944) DBX|Q9VWG6 BLOC|complement(343964..344050) DBX|O46060 BLOC|complement(339907..340644,340676..341068,341129..341797,341851..344226) } EVD { PRG|dmel_r3_to_dmel_r4_migration DB|dmel_r3_affy_oligos CLA|oligonucleotide DT|20050125 DBX|153553_at_1105 BLOC|complement(339675..339699) DBX|153553_at_1072 BLOC|complement(339708..339732) DBX|153553_at_1060 BLOC|complement(339720..339744) DBX|153553_at_1028 BLOC|complement(339752..339776) DBX|153553_at_1013 BLOC|complement(339767..339791) DBX|153553_at_1003 BLOC|complement(339777..339801) DBX|153553_at_981 BLOC|complement(339799..339823) DBX|153553_at_947 BLOC|complement(339833..339857) DBX|153553_at_751 BLOC|complement(340251..340275) DBX|153553_at_749 BLOC|complement(340253..340277) DBX|153553_at_731 BLOC|complement(340271..340295) DBX|153553_at_716 BLOC|complement(340286..340310) DBX|153553_at_645 BLOC|complement(340357..340381) DBX|153553_at_583 BLOC|complement(340419..340443) } EVD { PRG|sim4 DB|na_dbEST.diff.dmel CLA|EST DBX|SD06521.5prime BLOC|complement(339637..339867,340090..340365) DBX|EK085228.5prime BLOC|complement(343937..344225,344287..344376) DBX|SD05422.5prime BLOC|complement(343734..344225,344287..344349) DBX|EK270808.5prime BLOC|complement(341528..341680) DBX|EK290407.5prime BLOC|complement(341563..341787,341850..342045) DBX|SD07110.5prime BLOC|complement(339637..339867,340090..340365) DBX|SD04843.5prime BLOC|complement(343760..344225,344287..344353) } EVD { PRG|splign DB|na_cDNA_ncbi CLA|cDNA DT|20050907 DBX|LD21943 BLOC|complement(339604..339867,340090..340650,340706..341068,341132..341787, |341850..344225,344287..344364) } EVD { PRG|blastx_masked DB|aa_SPTR.plant CLA|protein DT|20041008 DBX|Q9M6D4 BLOC|complement(343657..344118) DBX|Q9M6C0 BLOC|complement(343657..344118) DBX|Q9M6C4 BLOC|complement(343657..344184) } EVD { PRG|sim4 DB|na_dbEST.same.dmel CLA|EST DBX|LD13207:contig2 BLOC|complement(339608..339867,340090..340311) DBX|LD13207:contig1 BLOC|complement(340445..340650,340706..341069) DBX|LD29104:contig2 BLOC|complement(339615..339867,340090..340312) DBX|LD29104:contig1 BLOC|complement(342145..342780) DBX|LD05591:contig2 BLOC|complement(339620..339867,340090..340310) DBX|LD05591:contig1 BLOC|complement(343236..343736) DBX|GH23588.5prime BLOC|complement(343511..344123) DBX|LD32243:contig1 BLOC|complement(343631..344225,344287..344344) DBX|LD32243:contig2 BLOC|complement(339620..339867,340090..340302) DBX|LD04586.5prime BLOC|complement(343787..344225,344287..344353) DBX|LD21943:contig2 BLOC|complement(339601..339867,340090..340312) DBX|LD21943:contig1 BLOC|complement(343574..344225,344287..344364) } EVD { PRG|sim4 DB|na_transcript.dmel.RELEASE32 CLA|mRNA DT|20041008 DBX|CG18273-RA.32 BLOC|complement(339620..339867,340090..340650,340706..341068,341132..341787, |341850..344225,344287..344364) } VERS|4.3 } # EOR GADR { RETE|ID 1 FBan0003827 GID 1 FBgn0004170 GSYM 1 sc CGSYM 1 CG3827 ARM 1 X CLOC 1 1A8-1A8 SCAF 1 AE003417 TRREC 1 AALEN 1 345 ID|FBan0003827 SYM|CG3827 GENSR { GSYM|sc ID|FBgn0004170 } ARM|X SCAF|AE003417 BLOC|252882..254303 CLOCC|1A8-1A8 SQLEN|1422 GO|nervous system development ; GO:0007399 |bristle morphogenesis ; GO:0008407 |ventral cord development ; GO:0007419 |central nervous system development ; GO:0007417 |DNA binding ; GO:0003677 |regulation of transcription from RNA polymerase II promoter ; GO:0006357 |regulation of transcription, DNA-dependent ; GO:0006355 |specific RNA polymerase II transcription factor activity ; GO:0003704 |sex determination, establishment of X:A ratio ; GO:0007540 |sex determination ; GO:0007530 |peripheral nervous system development ; GO:0007422 |transcriptional activator activity ; GO:0016563 |neuroblast fate determination ; GO:0007400 |nucleus ; GO:0005634 |regulation of progression through mitotic cell cycle ; GO:0007346 |dosage compensation ; GO:0007549 ID2|FBan0003827 |FBgn0003412 |FBgn0003324 |FBgn0026842 SYN|scute/sisterlessB |sisb |sc/T4 |sis b |Hw |AS-C T4sc |sis-b |unnamed |T4 AS-C |l(1)1Ba |sisB |DROACS2 |Sc |ascT4 |achaete-scute |sc&agr; |EG:198A6.1 |scute &agr; |Hairy-wing |sisterless-b CDNA|IP01419 AFFY|143431_at DT|20031201 TRREC { NAM|sc-RA SYN|FlyBase:FBtr0070073 |FlyBase Annotation IDs:CG3827-RA |FlyBase:FBpp0070072 |FlyBase Annotation IDs:CG3827-PA |GB_protein:AAF45499.1 AANAM|sc-PA SQLEN|1422 AALEN|345 BLOC|252882..254303 CDS|252999..254033 CMT|evidence=experimental |protein_id=AAF45499 DT|20020618 } CLNSR { CLA|enhancer NAM|sc-enhancer-1 SYN|FlyBase:FBgn0077724 |FlyBase Annotation IDs:GA17714 |Dpse\GA17714 BLOC|249786..250141 CMT|evidence=experimental |citation=FBrf0102908 |comment=SMC enhancer; directs expression in sensory organ mother cells (SMCs) |comment=within this sequence range, at least part of the putative |ortholog of the D. melanogaster gene CG3827 lives DT|20040202 } CLNSR { CLA|point_mutation NAM|sc[10-1] SYN|FlyBase:FBal0015199 BLOC|253485..253484 CMT|citation=FBrf0045760 |na_change=C154101T |evidence=experimental |pr_change=Q163@ DT|20040202 } CLNSR { CLA|protein_binding_site NAM|sc-protein_bind-3 SYN|FlyReg:FPID004523 BLOC|252535..252542 CMT|citation=FBrf0184337 |bound_moiety=ara-XP |citation=FBrf0086419 |evidence=experimental DT|20050524 } CLNSR { CLA|protein_binding_site NAM|sc-protein_bind-2 SYN|FlyReg:FPID004534 BLOC|249927..249967 CMT|citation=FBrf0184337 |citation=FBrf0102908 |bound_moiety=E(spl)-XP |evidence=experimental DT|20050524 } CLNSR { CLA|sequence_variant NAM|sc[Hw-49crv5] BLOC|253337..253344 CMT|evidence=experimental |citation=FBrf0047949 |comment=8bp deletion that causes a frameshift and a shortened |polypeptide. DT|20040202 } CLNSR { CLA|protein_binding_site NAM|sc-protein_bind-1 SYN|FlyReg:FPID004524 BLOC|252547..252551 CMT|citation=FBrf0086419 |citation=FBrf0184337 |evidence=experimental |bound_moiety=ara-XP DT|20050524 } CLNSR { CLA|point_mutation NAM|sc[M6] SYN|FlyBase:FBal0046403 BLOC|253338..253337 CMT|pr_change=Q114@ |na_change=C153954T |evidence=experimental |citation=FBrf0083155 DT|20040202 } EVD { PRG|blastx_masked DB|aa_SPTR.othinv CLA|protein DT|20041008 DBX|Q86G56 BLOC|253275..253520 DBX|Q86G55 BLOC|253275..253556 DBX|Q7Q4T6 BLOC|253296..253499 } EVD { PRG|sim4 DB|na_gadfly.dros.RELEASE2 CLA|mRNA DT|20041008 DBX|CT12777.2 BLOC|252999..254036 } EVD { PRG|sim4 DB|na_ARGsCDS.dros CLA|mRNA DT|20041008 DBX|CDS-sc-RA BLOC|252999..254033 } EVD { PRG|genie_masked DB|dummy CLA|genie_masked DT|20041008 BLOC|253035..254036 } EVD { PRG|dmel_r3_to_dmel_r4_migration DB|dmel_r3_affy_oligos CLA|oligonucleotide DT|20050125 DBX|143431_at_498 BLOC|253484..253508 DBX|143431_at_532 BLOC|253518..253542 DBX|143431_at_617 BLOC|253603..253627 DBX|143431_at_646 BLOC|253632..253656 DBX|143431_at_654 BLOC|253640..253664 DBX|143431_at_683 BLOC|253669..253693 DBX|143431_at_754 BLOC|253740..253764 DBX|143431_at_770 BLOC|253756..253780 DBX|143431_at_779 BLOC|253765..253789 DBX|143431_at_832 BLOC|253818..253842 DBX|143431_at_857 BLOC|253843..253867 DBX|143431_at_889 BLOC|253875..253899 DBX|143431_at_915 BLOC|253901..253925 DBX|143431_at_958 BLOC|253944..253968 } EVD { PRG|tblastxwrap_masked DB|na_scf_chunk_agambiae.fa CLA|DNA DT|20041008 DBX|AAAB01008963.1p17 BLOC|253287..253409 } EVD { PRG|sim4 DB|na_transcript.dmel.RELEASE32 CLA|mRNA DT|20041008 DBX|CG3827-RA.32 BLOC|252882..254303 } EVD { PRG|sim4 DB|na_transcript.dmel.RELEASE31 CLA|mRNA DT|20041008 DBX|CG3827-RA.31 BLOC|252882..254303 } EVD { PRG|sim4tandem DB|na_gb.dmel CLA|so DT|20050823 DBX|M17119 BLOC|252339..254470 } EVD { PRG|genscan_masked DB|dummy CLA|genscan_masked DT|20041008 BLOC|253035..254036 } EVD { PRG|blastx_masked DB|aa_SPTR.insect CLA|protein DT|20041008 DBX|O77031 BLOC|253062..254030 DBX|O77029 BLOC|253062..254030 DBX|AAQ82728 BLOC|253062..254030 } EVD { PRG|prosplign DB|aa_ncbi_dmel CLA|protein DT|20060123 DBX|AAY51546 BLOC|252999..254033 } EVD { PRG|augustus DB|dummy CLA|augustus DT|20050713 BLOC|252999..254036 } EVD { PRG|blastx_masked DB|aa_SPTR.othvert CLA|protein DT|20041008 DBX|Q91557 BLOC|253281..253514 DBX|Q91558 BLOC|253290..253514 DBX|Q98SF2 BLOC|253302..253514 } EVD { PRG|tblastxwrap_masked DB|na_baylorf1_scfchunk.dpse CLA|so DT|20041008 DBX|Contig7446_Contig2444-16 BLOC|253230..253538 DBX|Contig7446_Contig2444-16 BLOC|253263..253388 DBX|Contig7446_Contig2444-16 BLOC|253767..254033 } EVD { PRG|blastx_masked DB|aa_SPTR.dmel CLA|protein DT|20041008 DBX|Q9BMD4 BLOC|253036..253101 DBX|Q8MKZ3 BLOC|253036..253101 DBX|Q9BMD5 BLOC|253036..253101 DBX|P10084 BLOC|253062..254030 DBX|P09774 BLOC|253284..253502 DBX|Q8MRA5 BLOC|253284..253502 DBX|P09775 BLOC|253293..253496 DBX|AAM11397 BLOC|253293..253496 DBX|P10083 BLOC|253296..253502 DBX|Q8MKZ2 BLOC|253036..253101 DBX|Q9V5X3 BLOC|253036..253101 } EVD { PRG|splign DB|na_cDNA_ncbi CLA|cDNA DT|20050907 DBX|IP01419 BLOC|252907..254324 } EVD { PRG|sim4 DB|na_ARGs.dros CLA|mRNA DT|20041008 DBX|sc-RA BLOC|252882..254303 } VERS|4.3 } # EOR GADR { RETE|ID 1 FBan0003176 GID 1 FBgn0029524 GSYM 1 CG3176 CGSYM 1 CG3176 ARM 1 X CLOC 1 1B4-1B4 SCAF 1 AE003417 TRREC 1 AALEN 1 121 ID|FBan0003176 SYM|CG3176 GENSR { GSYM|CG3176 ID|FBgn0029524 } ARM|X SCAF|AE003417 BLOC|338758..339485 CLOCC|1B4-1B4 SQLEN|728 ID2|FBan0003176 |FBgn0062924 SYN|BcDNA:RH59219 EST|EK139823 |EK151826 |EK271857 |RH59219 CDNA|RH59219 DT|20031201 TRREC { NAM|CG3176-RA SYN|FlyBase:FBtr0070078 |FlyBase:FBpp0070077 |GB_protein:AAG22360.1 |FlyBase:FBgn0076469 |FlyBase Annotation IDs:GA16454 |Dpse\GA16454 AANAM|CG3176-PA SQLEN|524 AALEN|121 BLOC|join(338758..338819,338940..339255,339340..339485) CDS|join(338954..339255,339340..339400) CMT|protein_id=AAG22360 DT|20020716 } EVD { PRG|sim4 DB|na_transcript.dmel.RELEASE31 CLA|mRNA DT|20041008 DBX|CG3176-RA.31 BLOC|join(338758..338819,338940..339255,339340..339485) } EVD { PRG|sim4tandem DB|na_gb.dmel CLA|cDNA DT|20050823 DBX|RH59219 BLOC|join(338758..338819,338940..339255,339340..339485) } EVD { PRG|sim4 DB|na_gadfly.dros.RELEASE2 CLA|mRNA DT|20041008 DBX|CT10645.2 BLOC|join(338954..339255,339340..339403) } EVD { PRG|blastx_masked DB|aa_SPTR.insect CLA|protein DT|20041008 DBX|Q7PV04 BLOC|339122..339256 } EVD { PRG|prosplign DB|aa_ncbi_dmel CLA|protein DT|20060123 DBX|AAT47771 BLOC|join(338954..339255,339340..339394) } EVD { PRG|genie_masked DB|dummy CLA|genie_masked DT|20041008 BLOC|join(338954..339255,339340..339403) } EVD { PRG|augustus DB|dummy CLA|augustus DT|20050713 BLOC|join(338346..338388,338940..339255,339340..339403) } EVD { PRG|tblastxwrap_masked DB|na_baylorf1_scfchunk.dpse CLA|so DT|20041008 DBX|Contig7446_Contig2444-16 BLOC|339122..339256 } EVD { PRG|blastx_masked DB|aa_SPTR.dmel CLA|protein DT|20041008 DBX|AAS15656 BLOC|338938..339150 DBX|Q9W5G0 BLOC|338954..339280 DBX|Q9I7Z9 BLOC|338954..339280 DBX|Q8IRY8 BLOC|338954..339283 } EVD { PRG|sim4 DB|na_dbEST.diff.dmel CLA|EST DBX|EK139823.5prime BLOC|join(338682..338819,338940..339070) DBX|EK151826.5prime BLOC|join(338764..338819,338940..339253) DBX|EK271857.5prime BLOC|338937..339102 } EVD { PRG|sim4 DB|na_dbEST.same.dmel CLA|EST DBX|RH59219.5prime BLOC|join(338758..338819,338940..339255,339340..339485) } EVD { PRG|sim4 DB|na_transcript.dmel.RELEASE32 CLA|mRNA DT|20041008 DBX|CG3176-RA.32 BLOC|join(338758..338819,338940..339255,339340..339485) } VERS|4.3 } # EOR GADR { RETE|ID 1 FBan0013376 GID 1 FBgn0029518 GSYM 1 CG13376 CGSYM 1 CG13376 ARM 1 X CLOC 1 1A1-1A1 SCAF 1 AE003417 TRREC 1 AALEN 1 193 ID|FBan0013376 SYM|CG13376 GENSR { GSYM|CG13376 ID|FBgn0029518 } ARM|X SCAF|AE003417 BLOC|complement(123067..123648) CLOCC|1A1-1A1 SQLEN|582 GO|molecular function unknown ; GO:0005554 |cellular component unknown ; GO:0008372 |biological process unknown ; GO:0000004 AFFY|144339_r_at DT|20041216 TRREC { NAM|CG13376-RA SYN|FlyBase:FBtr0100649 |FlyBase:FBpp0100110 |GB_protein:AAX52465.1 AANAM|CG13376-PA SQLEN|582 (-) AALEN|193 BLOC|complement(123067..123648) CDS|complement(123070..123648) CMT|status=not done DT|20041215 } EVD { PRG|genscan_masked DB|dummy CLA|genscan_masked DT|20041008 BLOC|complement(123067..123648) } EVD { PRG|sim4 DB|na_gadfly.dros.RELEASE2 CLA|mRNA DT|20041008 DBX|CT32708.2 BLOC|complement(123321..123533) } EVD { PRG|prosplign DB|aa_ncbi_dmel CLA|protein DT|20060123 DBX|AAY55117 BLOC|complement(123523..123558) DBX|AAY55680 BLOC|complement(123109..123156,123241..123264,123355..123429) } EVD { PRG|genie_masked DB|dummy CLA|genie_masked DT|20041008 BLOC|complement(123067..123648) } EVD { PRG|augustus DB|dummy CLA|augustus DT|20050713 BLOC|complement(123067..123663,126027..126188,127586..128031,128112..128247, |128310..128435,129166..129705,130005..130214,130283..131225,131309..131334) } EVD { PRG|tblastxwrap_masked DB|na_baylorf1_scfchunk.dpse CLA|so DT|20041008 DBX|Contig7446_Contig2444-15 BLOC|complement(123520..123678) DBX|Contig7446_Contig2444-15 BLOC|complement(123136..123297) DBX|Contig7891_Contig7492A.fa-18 BLOC|complement(123136..123297) DBX|Contig3083_Contig4177-5 BLOC|complement(123187..123444) DBX|Contig7446_Contig2444-15 BLOC|complement(123187..123465) DBX|Contig7446_Contig2444-15 BLOC|complement(123349..123597) DBX|Contig6780_Contig1402-1 BLOC|complement(123076..123600) DBX|Contig6780_Contig1402-2 BLOC|complement(123076..123600) DBX|Contig7446_Contig2444-2 BLOC|complement(123190..123669) DBX|Contig7446_Contig2444-1 BLOC|complement(123190..123669) } EVD { PRG|dmel_r3_to_dmel_r4_migration DB|dmel_r3_affy_oligos CLA|oligonucleotide DT|20050125 DBX|144339_r_at_127 BLOC|complement(123395..123419) DBX|144339_r_at_118 BLOC|complement(123404..123428) DBX|144339_r_at_105 BLOC|complement(123417..123441) DBX|144339_r_at_85 BLOC|complement(123437..123461) DBX|144339_r_at_83 BLOC|complement(123439..123463) DBX|144339_r_at_59 BLOC|complement(123463..123487) DBX|144339_r_at_166 BLOC|complement(123356..123380) DBX|144339_r_at_48 BLOC|complement(123474..123498) DBX|144339_r_at_151 BLOC|complement(123371..123395) DBX|144339_r_at_42 BLOC|complement(123480..123504) DBX|144339_r_at_73 BLOC|complement(123383..123407) DBX|144339_r_at_41 BLOC|complement(123481..123505) DBX|144339_r_at_137 BLOC|complement(123385..123409) DBX|144339_r_at_37 BLOC|complement(123485..123509) } EVD { PRG|tblastxwrap_masked DB|na_scf_chunk_agambiae.fa CLA|DNA DT|20041008 DBX|AAAB01008987.1p106 BLOC|complement(123136..123552) DBX|AAAB01008807.1p91 BLOC|complement(123133..123654) } EVD { PRG|prosplign DB|aa_ncbi_other CLA|protein DT|20060124 DBX|NP_001024238 BLOC|complement(122857..122882,123078..123657) DBX|NP_494687 BLOC|complement(122931..122984,123027..123143,123159..123248,123258..123487, |123549..123592) } VERS|4.3 } # EOR GADR { RETE|ID 1 FBan0003796 GID 1 FBgn0000022 GSYM 1 ac CGSYM 1 CG3796 ARM 1 X CLOC 1 1A6-1A6 SCAF 1 AE003417 TRREC 1 AALEN 1 201 ID|FBan0003796 SYM|CG3796 GENSR { GSYM|ac ID|FBgn0000022 } ARM|X SCAF|AE003417 BLOC|226853..227813 CLOCC|1A6-1A6 SQLEN|961 GO|transcription factor activity ; GO:0003700 |oogenesis (sensu Insecta) ; GO:0009993 |positive regulation of transcription ; GO:0045941 ID2|FBan0003796 SYN|sc/T5 |EG:125H10.3 |AS-C T5ac |achaete-scute |990 E5 F1 |Ac |ASC |Hw |Hairy wing |ascT5 EST|EK280346 |EK276352 |EP10721 CDNA|IP01413 AFFY|143055_at DT|20031201 TRREC { NAM|ac-RA SYN|FlyBase:FBtr0070072 |FlyBase Annotation IDs:CG3796-RA |FlyBase:FBpp0070071 |FlyBase Annotation IDs:CG3796-PA |GB_protein:AAF45498.1 |FlyBase:FBgn0077701 |FlyBase Annotation IDs:GA17691 |Dpse\GA17691 AANAM|ac-PA SQLEN|961 AALEN|201 BLOC|226853..227813 CDS|226916..227518 CMT|evidence=experimental |protein_id=AAF45498 |comment=within this sequence range, at least part of the putative |ortholog of the D. melanogaster gene CG3796 lives DT|20020618 } CLNSR { CLA|regulatory_region NAM|ac-reg_element-3 BLOC|226587..226594 CMT|comment=Bound by heterodimers consisting of @da@ protein and either @ac@ protein, | @sc@ protein or @l(1)sc@ protein. Important for tissue-specific expression. |evidence=experimental |citation=FBrf0053776 |citation=FBrf0064732 |comment=E box T5E3 DT|20040202 } CLNSR { CLA|protein_binding_site NAM|ac-protein_bind-1 SYN|FlyReg:FPID003024 |FlyReg:FPID003023 BLOC|226541..226558 CMT|bound_moiety=HLHm5-XP |bound_moiety=E(spl)-XP |citation=FBrf0184337 |citation=FBrf0076959 |evidence=experimental DT|20050524 } CLNSR { CLA|regulatory_region NAM|ac-reg_element-2 BLOC|226548..226557 CMT|comment=bound by @h@ protein and @HLHm7@ protein |citation=FBrf0076513 |evidence=experimental |citation=FBrf0076514 |comment=h/E-1 site DT|20040202 } CLNSR { CLA|regulatory_region NAM|ac-reg_element-4 BLOC|226655..226662 CMT|evidence=experimental |comment=E box T5E2 |citation=FBrf0053776 |citation=FBrf0064732 |comment=Bound by heterodimers consisting of @da@ protein and either @ac@ protein, | @sc@ protein or @l(1)sc@ protein. Important for tissue-specific |expression. DT|20040202 } CLNSR { CLA|regulatory_region NAM|ac-reg_element-5 BLOC|226791..226798 CMT|comment=E box T5E1 |citation=FBrf0053776 |evidence=experimental |comment=Bound by heterodimers consisting of @da@ protein and either @ac@ protein, | @sc@ protein or @l(1)sc@ protein. Important for tissue-specific expression. |citation=FBrf0064732 DT|20040202 } CLNSR { CLA|regulatory_region NAM|ac-reg_element-1 BLOC|226032..226039 CMT|comment=E box T5E4 |evidence=experimental |citation=FBrf0053776 DT|20040202 } CLNSR { CLA|sequence_variant NAM|ac[Hw-1+R1] BLOC|223896..225514 CMT|linked_to=BglII-BglII_rfrag |citation=FBrf0043905 |evidence=experimental DT|20040202 } EVD { PRG|blastx_masked DB|aa_SPTR.othinv CLA|protein DT|20041008 DBX|Q9BLX3 BLOC|226979..227203 DBX|Q9BLX4 BLOC|226982..227197 DBX|Q7Q4T6 BLOC|226988..227206 } EVD { PRG|sim4 DB|na_gadfly.dros.RELEASE2 CLA|mRNA DT|20041008 DBX|CT12661.2 BLOC|226916..227521 } EVD { PRG|sim4 DB|na_ARGsCDS.dros CLA|mRNA DT|20041008 DBX|CDS-ac-RA BLOC|226916..227518 } EVD { PRG|repeatmasker DB|dummy CLA|RepeatMasker:dummy DT|20041008 DBX|AY219709 BLOC|227210..227280 } EVD { PRG|genie_masked DB|dummy CLA|genie_masked DT|20041008 BLOC|226916..227521 } EVD { PRG|dmel_r3_to_dmel_r4_migration DB|dmel_r3_affy_oligos CLA|oligonucleotide DT|20050125 DBX|143055_at_38 BLOC|226941..226965 DBX|143055_at_89 BLOC|226992..227016 DBX|143055_at_130 BLOC|227033..227057 DBX|143055_at_186 BLOC|227089..227113 DBX|143055_at_235 BLOC|227138..227162 DBX|143055_at_244 BLOC|227147..227171 DBX|143055_at_261 BLOC|227164..227188 DBX|143055_at_294 BLOC|227197..227221 DBX|143055_at_366 BLOC|227269..227293 DBX|143055_at_399 BLOC|227302..227326 DBX|143055_at_416 BLOC|227319..227343 DBX|143055_at_483 BLOC|227386..227410 DBX|143055_at_500 BLOC|227403..227427 DBX|143055_at_13 BLOC|226916..226940 } EVD { PRG|tblastxwrap_masked DB|na_scf_chunk_agambiae.fa CLA|DNA DT|20041008 DBX|AAAB01008963.1p17 BLOC|226988..227131 } EVD { PRG|sim4 DB|na_transcript.dmel.RELEASE32 CLA|mRNA DT|20041008 DBX|CG3796-RA.32 BLOC|226853..227813 } EVD { PRG|sim4 DB|na_transcript.dmel.RELEASE31 CLA|mRNA DT|20041008 DBX|CG3796-RA.31 BLOC|226853..227813 } EVD { PRG|sim4tandem DB|na_gb.dmel CLA|so DT|20050823 DBX|M17120 BLOC|225971..228209 } EVD { PRG|genscan_masked DB|dummy CLA|genscan_masked DT|20041008 BLOC|join(226916..227143,228277..228390) } EVD { PRG|blastx_masked DB|aa_SPTR.insect CLA|protein DT|20041008 DBX|Q9U911 BLOC|226916..227518 DBX|O77026 BLOC|226916..227518 DBX|Q24639 BLOC|226916..227518 } EVD { PRG|prosplign DB|aa_ncbi_dmel CLA|protein DT|20060123 DBX|AAY51549 BLOC|226916..227518 } EVD { PRG|repeat_runner_seg DB|dummy CLA|repeat_runner_seg DT|20041008 BLOC|227200..227389 } EVD { PRG|blastx_masked DB|aa_SPTR.othvert CLA|protein DT|20041008 DBX|O13150 BLOC|226988..227206 DBX|Q9PRF6 BLOC|226988..227206 DBX|Q90260 BLOC|226988..227206 } EVD { PRG|tblastxwrap_masked DB|na_baylorf1_scfchunk.dpse CLA|so DT|20041008 DBX|Contig7446_Contig2444-16 BLOC|226982..227209 DBX|Contig7446_Contig2444-16 BLOC|227399..227518 } EVD { PRG|blastx_masked DB|aa_SPTR.dmel CLA|protein DT|20041008 DBX|P10083 BLOC|226916..227518 DBX|P09774 BLOC|226985..227512 DBX|Q8MRA5 BLOC|226985..227512 DBX|P10084 BLOC|226988..227203 DBX|AAM11397 BLOC|join(226988..227197,227435..227509) DBX|P09775 BLOC|join(226988..227197,227435..227509) } EVD { PRG|sim4 DB|na_dbEST.diff.dmel CLA|EST DBX|EK280346.5prime BLOC|226948..227169 DBX|EK276352.5prime BLOC|226948..227169 DBX|EP10721.3prime BLOC|227280..227747 } EVD { PRG|splign DB|na_cDNA_ncbi CLA|cDNA DT|20050907 DBX|IP01413 BLOC|226871..227769 } EVD { PRG|blastx_masked DB|aa_SPTR.primate CLA|protein DT|20041008 DBX|Q99929 BLOC|226988..227206 } EVD { PRG|sim4 DB|na_ARGs.dros CLA|mRNA DT|20041008 DBX|ac-RA BLOC|226853..227813 } VERS|4.3 } # EOR GADR { RETE|ID 1 FBan0032817 GID 1 FBgn0052817 GSYM 1 CG32817 CGSYM 1 CG32817 ARM 1 X CLOC 1 1B4-1B4 SCAF 1 AE003417 TRREC 1 AALEN 1 121 ID|FBan0032817 SYM|CG32817 GENSR { GSYM|CG32817 ID|FBgn0052817 } ARM|X SCAF|AE003417 BLOC|336268..336996 CLOCC|1B4-1B4 SQLEN|729 ID2|FBan0032817 EST|EP05013 |RH55403 CDNA|RH55403 DT|20031201 TRREC { NAM|CG32817-RA SYN|FlyBase:FBtr0070077 |FlyBase:FBpp0070076 |GB_protein:AAN09015.1 |FlyBase:FBgn0077176 |FlyBase Annotation IDs:GA17162 |Dpse\GA17162 AANAM|CG32817-PA SQLEN|525 AALEN|121 BLOC|join(336268..336331,336452..336767,336852..336996) CDS|join(336466..336767,336852..336912) CMT|protein_id=AAN09015 DT|20020618 } EVD { PRG|sim4 DB|na_transcript.dmel.RELEASE31 CLA|mRNA DT|20041008 DBX|CG32817-RA.31 BLOC|join(336268..336331,336452..336767,336852..336996) } EVD { PRG|sim4tandem DB|na_gb.dmel CLA|cDNA DT|20050823 DBX|RH55403 BLOC|join(336268..336331,336452..336767,336852..336996) } EVD { PRG|blastx_masked DB|aa_SPTR.insect CLA|protein DT|20041008 DBX|Q7PV04 BLOC|336634..336768 } EVD { PRG|prosplign DB|aa_ncbi_dmel CLA|protein DT|20060123 DBX|AAT47771 BLOC|join(336466..336767,336852..336906) } EVD { PRG|genie_masked DB|dummy CLA|genie_masked DT|20041008 BLOC|join(336466..336767,336852..336915) } EVD { PRG|augustus DB|dummy CLA|augustus DT|20050713 BLOC|join(336466..336767,336852..336915) } EVD { PRG|tblastxwrap_masked DB|na_baylorf1_scfchunk.dpse CLA|so DT|20041008 DBX|Contig7446_Contig2444-16 BLOC|336634..336768 } EVD { PRG|blastx_masked DB|aa_SPTR.dmel CLA|protein DT|20041008 DBX|AAS15656 BLOC|336450..336662 DBX|Q9I7Z9 BLOC|336466..336792 DBX|Q9W5G0 BLOC|336466..336792 DBX|Q8IRY8 BLOC|336466..336795 } EVD { PRG|sim4 DB|na_dbEST.diff.dmel CLA|EST DBX|EP05013.3prime BLOC|336490..336933 } EVD { PRG|sim4 DB|na_dbEST.same.dmel CLA|EST DBX|RH55403.5prime BLOC|join(336268..336331,336452..336767,336852..336996) } EVD { PRG|sim4 DB|na_transcript.dmel.RELEASE32 CLA|mRNA DT|20041008 DBX|CG32817-RA.32 BLOC|join(336268..336331,336452..336767,336852..336996) } VERS|4.3 } # EOR GADR { RETE|ID 1 FBan0013377 GID 1 FBgn0040369 GSYM 1 CG13377 CGSYM 1 CG13377 ARM 1 X CLOC 1 1A1-1A1 SCAF 1 AE003417 TRREC 1 AALEN 1 330 ID|FBan0013377 SYM|CG13377 GENSR { GSYM|CG13377 ID|FBgn0040369 } ARM|X SCAF|AE003417 BLOC|complement(115155..120817) CLOCC|1A1-1A1 SQLEN|5663 GO|metabolism ; GO:0008152 |3-hydroxybutyrate dehydrogenase activity ; GO:0003858 ID2|FBan0013377 |FBgn0029517 SYN|EG:BACR37P7.9 EST|EK154019 |EK059056 |EK069508 |EK075342 |EK042119 |EC31728 |EK214638 |RE12214 |EK058201 |RE15974 |RE22712 |EK122617 |EK115119 |RE41143 |EK182312 |RE56472 |EP00709 |EK132120 |EK185323 |EK228939 |EK282253 |EK303520 |EP17827 CDNA|RE15974 AFFY|144338_at DT|20031201 TRREC { NAM|CG13377-RA SYN|FlyBase:FBtr0070106 |FlyBase:FBpp0070101 |GB_protein:AAF45489.1 |FlyBase:FBgn0072286 |FlyBase Annotation IDs:GA12240 |Dpse\GA12240 AANAM|CG13377-PA SQLEN|1603 (-) AALEN|330 BLOC|complement(115155..115650,115715..116493,120490..120817) CDS|complement(115430..115650,115715..116483) CMT|protein_id=AAF45489 DT|20020617 } EVD { PRG|blastx_masked DB|aa_SPTR.othinv CLA|protein DT|20041008 DBX|Q9GQA8 BLOC|complement(115743..116342) DBX|Q7QA37 BLOC|complement(115478..115633,115722..116483) } EVD { PRG|sim4 DB|na_gadfly.dros.RELEASE2 CLA|mRNA DT|20041008 DBX|CT32709.2 BLOC|complement(115427..115650,115715..116483) } EVD { PRG|genie_masked DB|dummy CLA|genie_masked DT|20041008 BLOC|complement(115427..115650,115715..116483) } EVD { PRG|dmel_r3_to_dmel_r4_migration DB|dmel_r3_affy_oligos CLA|oligonucleotide DT|20050125 DBX|144338_at_694 BLOC|complement(115778..115802) DBX|144338_at_679 BLOC|complement(115793..115817) DBX|144338_at_642 BLOC|complement(115830..115854) DBX|144338_at_624 BLOC|complement(115848..115872) DBX|144338_at_612 BLOC|complement(115860..115884) DBX|144338_at_610 BLOC|complement(115862..115886) DBX|144338_at_570 BLOC|complement(115902..115926) DBX|144338_at_935 BLOC|complement(115473..115497) DBX|144338_at_912 BLOC|complement(115496..115520) DBX|144338_at_890 BLOC|complement(115518..115542) DBX|144338_at_863 BLOC|complement(115545..115569) DBX|144338_at_844 BLOC|complement(115564..115588) DBX|144338_at_793 BLOC|complement(115615..115639) DBX|144338_at_746 BLOC|complement(115726..115750) } EVD { PRG|tblastx_masked DB|na_dbEST.insect CLA|EST DBX|BX613031 BLOC|complement(115559..115633,115722..116342) DBX|BX606194 BLOC|complement(115977..116483) } EVD { PRG|tblastxwrap_masked DB|na_scf_chunk_agambiae.fa CLA|DNA DT|20041008 DBX|AAAB01008898.1p26 BLOC|complement(115713..115877) DBX|AAAB01008898.1p26 BLOC|complement(115905..116306) } EVD { PRG|sim4 DB|na_dbEST.same.dmel CLA|EST DBX|RE12214.5prime BLOC|complement(116250..116493,120490..120817) DBX|RE15974:contig2 BLOC|complement(115155..115650,115715..115850) DBX|RE15974:contig1 BLOC|complement(116217..116493,120490..120817) DBX|RE22712.5prime BLOC|complement(116190..116493,120490..120817) DBX|RE41143.5prime BLOC|complement(116233..116493,120490..120817) DBX|RE56472.5prime BLOC|complement(116308..116493,120490..120817) } EVD { PRG|sim4 DB|na_transcript.dmel.RELEASE32 CLA|mRNA DT|20041008 DBX|CG13377-RA.32 BLOC|complement(115155..115650,115715..116493,120490..120817) } EVD { PRG|sim4 DB|na_transcript.dmel.RELEASE31 CLA|mRNA DT|20041008 DBX|CG13377-RA.31 BLOC|complement(115155..115650,115715..116493,120490..120817) } EVD { PRG|sim4tandem DB|na_gb.dmel CLA|cDNA DT|20050823 DBX|RE15974 BLOC|complement(115155..115650,115715..116493,120490..120817) } EVD { PRG|genscan_masked DB|dummy CLA|genscan_masked DT|20041008 BLOC|complement(115427..115650,115715..116474) } EVD { PRG|blastx_masked DB|aa_SPTR.rodent CLA|protein DT|20041008 DBX|Q8BK53 BLOC|complement(115683..116375) DBX|P29147 BLOC|complement(115683..116375) DBX|Q80XN0 BLOC|complement(115683..116375) } EVD { PRG|augustus DB|dummy CLA|augustus DT|20050713 BLOC|complement(115427..115650,115715..116474) } EVD { PRG|tblastxwrap_masked DB|na_baylorf1_scfchunk.dpse CLA|so DT|20041008 DBX|Contig2138_Contig8242-1 BLOC|complement(115460..115654) DBX|Contig2138_Contig8242-1 BLOC|complement(115707..115889) DBX|Contig2138_Contig8242-1 BLOC|complement(115893..116498) DBX|Contig2138_Contig8242-1 BLOC|complement(116398..116505) } EVD { PRG|sim4 DB|na_dbEST.diff.dmel CLA|EST DBX|EK154019.5prime BLOC|complement(117103..117534) DBX|EK059056.5prime BLOC|complement(116327..116797) DBX|EK069508.5prime BLOC|complement(116396..116797) DBX|EK075342.5prime BLOC|complement(116251..116797) DBX|EK042119.5prime BLOC|complement(115579..115650,115715..116165) DBX|EC31728.5prime BLOC|complement(115165..115520) DBX|EK214638.5prime BLOC|complement(115288..115441) DBX|EK058201.5prime BLOC|complement(116376..116797) DBX|EK122617.5prime BLOC|complement(116910..117349) DBX|EK115119.5prime BLOC|complement(119160..119558) DBX|EK182312.5prime BLOC|complement(120207..120670) DBX|EP00709.3prime BLOC|complement(119408..119768) DBX|EK132120.5prime BLOC|complement(116910..117351) DBX|EK185323.5prime BLOC|complement(116910..117349) DBX|EK228939.5prime BLOC|complement(120601..120818) DBX|EK282253.5prime BLOC|complement(116376..116493,120490..120818) DBX|EK303520.5prime BLOC|complement(120571..120818) DBX|EP17827.3prime BLOC|complement(119010..119401) } EVD { PRG|blastx_masked DB|aa_SPTR.dmel CLA|protein DT|20041008 DBX|Q9W5H1 BLOC|complement(115448..115648,115713..116483) } EVD { PRG|blastx_masked DB|aa_SPTR.primate CLA|protein DT|20041008 DBX|Q02338 BLOC|complement(115683..116390) DBX|AAP78485 BLOC|complement(115755..116447) DBX|P37059 BLOC|complement(115755..116447) } VERS|4.3 } # EOR GADR { RETE|ID 1 FBan0003757 GID 1 FBgn0004034 GSYM 1 y CGSYM 1 CG3757 ARM 1 X CLOC 1 1A5-1A5 SCAF 1 AE003417 TRREC 1 AALEN 1 541 ID|FBan0003757 SYM|CG3757 GENSR { GSYM|y ID|FBgn0004034 } ARM|X SCAF|AE003417 BLOC|213331..218067 CLOCC|1A5-1A5 SQLEN|4737 GO|carbon utilization by fixation of carbon dioxide ; GO:0015977 |ribulose bisphosphate carboxylase complex (sensu Magnoliophyta) ; GO:0009573 |ribulose-bisphosphate carboxylase activity ; GO:0016984 |cuticle pigmentation ; GO:0048067 |male courtship behavior (sensu Insecta), wing extension ; GO:0048065 |larval or pupal development (sensu Insecta) ; GO:0002165 |extracellular region ; GO:0005576 |courtship behavior ; GO:0007619 |adult cuticle biosynthesis (sensu Insecta) ; GO:0008365 |ectoderm development ; GO:0007398 |melanin biosynthesis ; GO:0042438 |receptor binding ; GO:0005102 |melanin biosynthesis from tyrosine ; GO:0006583 |structural molecule activity ; GO:0005198 |pigmentation during development ; GO:0048066 ID2|FBan0003757 SYN|w |EG:125H10.2 |T6 EST|EK147432 AFFY|143416_at CMT|comment=Replace with wild type sequence from GenBank accession NG_000211 |mutant_in_strain=single_basepair_insertion |comment=Compare with GB:CAA28024, compare with SWISSPROT:P09957 |comment=Known mutation in sequenced strain |comment=Translation start was set at the CTG codon (->Leu) preceding |the second codon (TTC). |comment=A single nucleotide (C) inserted into translation start |codon (ATG -> ACTG). Compare with GB:X04427. DT|20031201 TRREC { NAM|y-RA SYN|FlyBase:FBtr0070071 |FlyBase Annotation IDs:CG3757-RA |FlyBase:FBpp0070070 |FlyBase Annotation IDs:CG3757-PA |GB_protein:AAF45497.1 AANAM|y-PA SQLEN|2038 AALEN|541 BLOC|join(213331..213739,216439..218067) CDS|join(213501..213739,216439..217823) CMT|protein_id=AAF45497 |evidence=experimental |validation_flag=no ATG start |comment=Unconventional translation start because of mutation in sequenced strain, | changed ATG to CTG DT|20021217 } CLNSR { CLA|enhancer NAM|y-enhancer-2 SYN|FlyBase:FBgn0013863 |GB:AJ300666 |FlyBase Annotation IDs:GA17665 |Dpse\y BLOC|211466..212634 CMT|evidence=experimental |comment=tissue-specific enhancer |comment=the representative GB acc AJ300666 matches to a genomic |region that extends beyond the gene boundary DT|20040202 } CLNSR { CLA|enhancer NAM|y-enhancer-1 BLOC|210460..211465 CMT|evidence=experimental |comment=tissue-specific enhancer DT|20040202 } CLNSR { CLA|regulatory_region NAM|y-reg_element-1 BLOC|210460..213331 CMT|comment=The 2873 nucleotides upstream of the @y@ coding region |are responsible for tissue specific expression of the @y@ transcript. |evidence=experimental |citation=FBrf0044945 DT|20040202 } CLNSR { CLA|insertion_site NAM|y-insertion_site-1 BLOC|212628..212631 CMT|evidence=experimental |comment=insertion target site DT|20040202 } EVD { PRG|blastx_masked DB|aa_SPTR.othinv CLA|protein DT|20041008 DBX|Q7Q0L3 BLOC|join(213553..213741,216438..217418) DBX|Q7Q4T5 BLOC|join(213571..213741,216438..217718) DBX|Q7QJJ7 BLOC|join(213586..213741,216438..217424) } EVD { PRG|sim4 DB|na_gadfly.dros.RELEASE2 CLA|mRNA DT|20041008 DBX|CT12485.2 BLOC|join(213502..213739,216439..217826) } EVD { PRG|sim4 DB|na_ARGsCDS.dros CLA|mRNA DT|20041008 DBX|CDS-y-RA BLOC|join(213501..213739,216439..217823) } EVD { PRG|genie_masked DB|dummy CLA|genie_masked DT|20041008 BLOC|join(213671..213739,215376..215442,216439..217304,217530..217826) } EVD { PRG|dmel_r3_to_dmel_r4_migration DB|dmel_r3_affy_oligos CLA|oligonucleotide DT|20050125 DBX|143416_at_1077 BLOC|217265..217289 DBX|143416_at_1109 BLOC|217297..217321 DBX|143416_at_1150 BLOC|217338..217362 DBX|143416_at_1176 BLOC|217364..217388 DBX|143416_at_1199 BLOC|217387..217411 DBX|143416_at_1236 BLOC|217424..217448 DBX|143416_at_1248 BLOC|217436..217460 DBX|143416_at_1281 BLOC|217469..217493 DBX|143416_at_1339 BLOC|217527..217551 DBX|143416_at_1381 BLOC|217569..217593 DBX|143416_at_1440 BLOC|217628..217652 DBX|143416_at_1463 BLOC|217651..217675 DBX|143416_at_1512 BLOC|217700..217724 DBX|143416_at_1583 BLOC|217771..217795 } EVD { PRG|tblastx_masked DB|na_dbEST.insect CLA|EST DBX|BM606111 BLOC|join(213517..213741,216438..216767) DBX|BP118364 BLOC|join(213544..213768,216438..216887) DBX|BP119072 BLOC|join(213583..213768,216438..216854,216855..216923) DBX|BP118666 BLOC|216666..217217 DBX|BM599718 BLOC|join(216906..217319,217320..217385) DBX|BM601719 BLOC|217014..217439 } EVD { PRG|tblastxwrap_masked DB|na_scf_chunk_agambiae.fa CLA|DNA DT|20041008 DBX|AAAB01008980.1p159 BLOC|213544..213729 DBX|AAAB01008963.1p17 BLOC|213571..213744 DBX|AAAB01008980.1p134 BLOC|213574..213741 DBX|AAAB01008963.1p17 BLOC|216438..216878 DBX|AAAB01008980.1p134 BLOC|216543..216761 DBX|AAAB01008807.1p19 BLOC|216546..216764 DBX|AAAB01008980.1p159 BLOC|216549..216764 DBX|AAAB01008963.1p17 BLOC|216864..217439 DBX|AAAB01008879.1p10 BLOC|216867..217082 DBX|AAAB01008980.1p159 BLOC|217140..217418 DBX|AAAB01008879.1p10 BLOC|217149..217418 DBX|AAAB01008980.1p134 BLOC|217200..217418 DBX|AAAB01008807.1p19 BLOC|217284..217424 } EVD { PRG|prosplign DB|aa_ncbi_other CLA|protein DT|20060123 DBX|AAT74557 BLOC|join(213586..213739,216439..217454) DBX|AAX73042 BLOC|216243..217448 } EVD { PRG|sim4 DB|na_transcript.dmel.RELEASE32 CLA|mRNA DT|20041008 DBX|CG3757-RA.32 BLOC|join(213331..213739,216439..218067) } EVD { PRG|sim4 DB|na_transcript.dmel.RELEASE31 CLA|mRNA DT|20041008 DBX|CG3757-RA.31 BLOC|join(213331..213739,216439..218067) } EVD { PRG|sim4tandem DB|na_gb.dmel CLA|so DT|20050823 DBX|AF345778 BLOC|215620..216137 DBX|AF345777 BLOC|215620..216137 DBX|AF345776 BLOC|215620..216137 DBX|AF345775 BLOC|215620..216137 DBX|AF345774 BLOC|215620..216137 DBX|AF345773 BLOC|215620..216137 DBX|AF345772 BLOC|215620..216137 DBX|AF345771 BLOC|215620..216137 DBX|AF345770 BLOC|215620..216137 DBX|X06481 BLOC|210460..213331 DBX|X04427 BLOC|join(212462..214634,214635..218067) DBX|X04703 BLOC|join(212836..213739,216439..218156) DBX|AF345769 BLOC|215620..216137 DBX|AF345767 BLOC|215620..216137 DBX|AF345768 BLOC|215620..216137 } EVD { PRG|genscan_masked DB|dummy CLA|genscan_masked DT|20041008 BLOC|join(209901..210103,212991..213072,213511..213739,216439..217826) } EVD { PRG|blastx_masked DB|aa_SPTR.insect CLA|protein DT|20041008 DBX|Q9BI23 BLOC|join(213502..213741,216438..217796) DBX|Q9BI17 BLOC|join(213502..213741,216438..217796) DBX|Q9BI26 BLOC|join(213553..213741,216438..217796) } EVD { PRG|augustus DB|dummy CLA|augustus DT|20050713 BLOC|join(172074..172284,203009..204529,204902..205060,205469..206146, |206266..206433,216439..216951,217648..217761,233843..233982) } EVD { PRG|tblastxwrap_masked DB|na_baylorf1_scfchunk.dpse CLA|so DT|20041008 DBX|Contig7446_Contig2444-15 BLOC|216432..217469 DBX|Contig1006_Contig943-4 BLOC|216483..216767 DBX|Contig1086_Contig7523-1 BLOC|216546..216752 DBX|Contig1086_Contig7523-1 BLOC|217143..217421 DBX|Contig1006_Contig943-4 BLOC|217143..217430 DBX|Contig7446_Contig2444-15 BLOC|217461..217571 DBX|Contig7446_Contig2444-16 BLOC|217461..217571 DBX|Contig7446_Contig2444-15 BLOC|217566..217745 DBX|Contig7446_Contig2444-16 BLOC|217566..217745 DBX|Contig7446_Contig2444-15 BLOC|217761..217823 DBX|Contig7446_Contig2444-16 BLOC|217761..217823 DBX|Contig7446_Contig2444-16 BLOC|213289..213369 DBX|Contig7446_Contig2444-15 BLOC|213289..213369 DBX|Contig7446_Contig2444-16 BLOC|213523..213750 DBX|Contig7446_Contig2444-15 BLOC|213523..213750 DBX|Contig1006_Contig943-4 BLOC|213535..213741 DBX|Contig1086_Contig7523-1 BLOC|213562..213729 DBX|Contig7446_Contig2444-16 BLOC|216422..216571 DBX|Contig7446_Contig2444-15 BLOC|216422..216571 DBX|Contig7446_Contig2444-16 BLOC|216432..217469 } EVD { PRG|blastx_masked DB|aa_SPTR.dmel CLA|protein DT|20041008 DBX|Q9VFV1 BLOC|216438..217373 DBX|Q9W1R1 BLOC|216438..217373 DBX|Q9VFV2 BLOC|216438..217415 DBX|Q9VG08 BLOC|216438..217418 DBX|Q9W1R0 BLOC|216438..217418 DBX|Q9VG09 BLOC|216438..217418 DBX|Q86NV9 BLOC|216438..217418 DBX|Q9VFV3 BLOC|216444..217448 DBX|Q9V4C0 BLOC|216558..217436 DBX|P09957 BLOC|join(213502..213741,216438..217796) DBX|AAF53432 BLOC|join(213562..213741,216438..216527,216546..217421) DBX|Q8MYU4 BLOC|join(213562..213741,216438..216527,216546..217421) DBX|Q9VJQ3 BLOC|join(213562..213741,216438..216527,216546..217421) DBX|Q8SZ51 BLOC|join(213571..213741,216438..217163) DBX|Q9VJI5 BLOC|join(213574..213741,216438..217430) DBX|Q8MSH8 BLOC|216438..217373 } EVD { PRG|sim4 DB|na_dbEST.diff.dmel CLA|EST DBX|EK147432.5prime BLOC|213335..213502 } EVD { PRG|sim4 DB|na_ARGs.dros CLA|mRNA DT|20041008 DBX|y-RA BLOC|join(213331..213739,216439..218067) } VERS|4.3 } # EOR GADR { RETE|ID 1 FBan0018275 GID 1 FBgn0029523 GSYM 1 CG18275 CGSYM 1 CG18275 ARM 1 X CLOC 1 1B4-1B4 SCAF 1 AE003417 TRREC 1 AALEN 1 155 ID|FBan0018275 SYM|CG18275 GENSR { GSYM|CG18275 ID|FBgn0029523 } ARM|X SCAF|AE003417 BLOC|complement(335016..335607) CLOCC|1B4-1B4 SQLEN|592 ID2|FBan0018275 AFFY|144344_f_at |144345_s_at DT|20031201 TRREC { NAM|CG18275-RA SYN|FlyBase:FBtr0070097 |FlyBase:FBpp0070092 |GB_protein:AAG22359.2 |FlyBase:FBgn0074896 |FlyBase Annotation IDs:GA14869 |Dpse\GA14869 AANAM|CG18275-PA SQLEN|468 (-) AALEN|155 BLOC|complement(335016..335296,335421..335607) CDS|complement(335019..335296,335421..335607) CMT|protein_id=AAG22359 DT|20020618 } EVD { PRG|sim4 DB|na_transcript.dmel.RELEASE31 CLA|mRNA DT|20041008 DBX|CG18275-RA.31 BLOC|complement(335016..335296,335421..335607) } EVD { PRG|genscan_masked DB|dummy CLA|genscan_masked DT|20041008 BLOC|complement(328656..328754,328948..329383,329464..329673,329742..329911, |329978..330527,330586..331022,331132..331328,331520..331902,331980..332135, |332591..333114,334545..334738,335030..335251,335421..335574,336568..336719, |337082..337269,337735..337991,338051..338334,338424..338436,339056..339248, |339710..339867,340090..340650,340706..341068,341132..341787,341850..344225, |344287..344302) } EVD { PRG|sim4 DB|na_gadfly.dros.RELEASE2 CLA|mRNA DT|20041008 DBX|CT41450.2 BLOC|complement(335421..335607) } EVD { PRG|genie_masked DB|dummy CLA|genie_masked DT|20041008 BLOC|complement(335016..335296,335421..335607) } EVD { PRG|tblastxwrap_masked DB|na_baylorf1_scfchunk.dpse CLA|so DT|20041008 DBX|Contig7446_Contig2444-16 BLOC|complement(335046..335303) } EVD { PRG|sim4 DB|na_transcript.dmel.RELEASE32 CLA|mRNA DT|20041008 DBX|CG18275-RA.32 BLOC|complement(335016..335296,335421..335607) } EVD { PRG|dmel_r3_to_dmel_r4_migration DB|dmel_r3_affy_oligos CLA|oligonucleotide DT|20050125 DBX|144344_f_at_84 BLOC|complement(335512..335536) DBX|144344_f_at_80 BLOC|complement(335516..335540) DBX|144344_f_at_70 BLOC|complement(335526..335550) DBX|144344_f_at_54 BLOC|complement(335542..335566) DBX|144345_s_at_427 BLOC|complement(335176..335200) DBX|144344_f_at_43 BLOC|complement(335553..335577) DBX|144344_f_at_137 BLOC|complement(335459..335483) DBX|144344_f_at_38 BLOC|complement(335558..335582) DBX|144344_f_at_129 BLOC|complement(335467..335491) DBX|144344_f_at_36 BLOC|complement(335560..335584) DBX|144344_f_at_126 BLOC|complement(335470..335494) DBX|144344_f_at_33 BLOC|complement(335563..335587) DBX|144344_f_at_99 BLOC|complement(335497..335521) DBX|144344_f_at_28 BLOC|complement(335568..335592) DBX|144344_f_at_93 BLOC|complement(335503..335527) } EVD { PRG|blastx_masked DB|aa_SPTR.dmel CLA|protein DT|20041008 DBX|Q9I7Z8 BLOC|complement(335455..335592,335619..335771) DBX|O46060 BLOC|complement(335455..335592,335619..335771) DBX|Q8MRA8 BLOC|complement(335061..335243) DBX|Q9VWG4 BLOC|complement(335061..335243) DBX|Q9I7Z8 BLOC|complement(334996..335040,335046..335468) DBX|O46060 BLOC|complement(334996..335040,335046..335468) DBX|Q9I800 BLOC|complement(335019..335297,335422..335607) } VERS|4.3 } # EOR GADR { RETE|ID 1 FBan0002945 GID 1 FBgn0000316 GSYM 1 cin CGSYM 1 CG2945 ARM 1 X CLOC 1 1A1-1A1 SCAF 1 AE003417 TRREC 2 AALEN 2 601 ID|FBan0002945 SYM|CG2945 GENSR { GSYM|cin ID|FBgn0000316 } ARM|X SCAF|AE003417 BLOC|111774..115292 CLOCC|1A1-1A1 SQLEN|3519 GO|proteolysis ; GO:0006508 |Mo-molybdopterin cofactor biosynthesis ; GO:0006777 |embryonic development (sensu Insecta) ; GO:0001700 |cysteine-type endopeptidase activity ; GO:0004197 |pteridine and derivative metabolism ; GO:0042558 ID2|FBan0002945 |FBgn0026665 SYN|l(1)G0142 |fs(1)M50 |l(1)1Ae |EG:BACR37P7.3 EST|EK185562 |EP05718 |EK108203 |EK245548 |EK204154 |EK256536 |EK222046 |EK117428 |EK113007 |EK161134 |EK259755 |AT12845 |EK169546 |LD39954 |RE02056 |RE50474 |RE73764 |LD03207 |LD47852 |RE71641 |LD06372 |LD46526 |RE08509 |LD14588 |RE71642 |RE72730 |RE23878 |RE51247 |RE15103 |LD22107 |RE48937 |RE72525 |LD22617 |LD40205 |RE33629 |RE39963 |RE03576 |RE67435 |LD13071 |RE24061 |LD10865 |RE41991 |RE26852 |RE14303 |RE71435 |RE15720 |RE50837 |RE21975 |RE49347 |RE70182 |RE19907 |RE25619 |RE19989 |RE66625 |GH09380 |RE30076 |RE11076 |RE59268 |RE39219 CDNA|GH09380 AFFY|152241_at CMT|comment=DGC clone GH09380 appears problematic: represents a rare |alternative transcript. DT|20031201 TRREC { NAM|cin-RA SYN|FlyBase:FBtr0070065 |FlyBase Annotation IDs:CG2945-RA |FlyBase:FBpp0070064 |FlyBase Annotation IDs:CG2945-PA |GB_protein:AAN09010.1 AANAM|cin-PA SQLEN|2136 AALEN|601 BLOC|join(112471..112646,112703..113463,113584..113762,113821..114249, |114302..114464,114804..114902,114964..115292) CDS|join(112616..112646,112703..113463,113584..113762,113821..114249, |114302..114464,114804..114902,114964..115104) CMT|protein_id=AAN09010 |evidence=experimental |citation=FBrf0073502 DT|20020716 } TRREC { NAM|cin-RB SYN|FlyBase:FBtr0070064 |FlyBase Annotation IDs:CG2945-RB |FlyBase:FBpp0070063 |FlyBase Annotation IDs:CG2945-PB |GB_protein:AAF45488.1 AANAM|cin-PB SQLEN|2479 AALEN|601 BLOC|join(111774..112238,112593..112646,112703..113463,113584..113762, |113821..114249,114302..114464,114804..114902,114964..115292) CDS|join(112616..112646,112703..113463,113584..113762,113821..114249, |114302..114464,114804..114902,114964..115104) CMT|comment=Only one EST supports this alternative transcript |protein_id=AAF45488 DT|20020716 } CLNSR { CLA|insertion_site NAM|P{}cin[pi1] BLOC|112786..112786 CMT|evidence=experimental |comment=insertion site reported in Figure 3 of FBrf0073502 |citation=FBrf0073502 DT|20040202 } CLNSR { CLA|aberration_junction NAM|Df(1)Sp(J1d).bk2 SYN|FlyBase:FBab0000693 |FlyBase:FBgn0075554 |FlyBase Annotation IDs:GA15537 |Dpse\GA15537 BLOC|108984..113252 CMT|linked_to=EcoRI-EcoRI_rfrag |comment=position of restriction fragment on reference sequence inferred by FlyBase curator; | size of restriction fragment found differs slightly from the |one reported in FBrf0073502 (4.2 vs 3.8 kb.) |citation=FBrf0073502 |evidence=experimental |comment=Range of putative ortholog from tblastn was extended |to cover the gene prediction DT|20040202 } EVD { PRG|blastx_masked DB|aa_SPTR.othinv CLA|protein DT|20041008 DBX|Q7QCT8 BLOC|join(112684..113466,113608..113769,113816..114259,114303..114410, |114816..114908,114964..115104) DBX|Q7SEH9 BLOC|join(112693..113127,113251..113403,113599..113727,113816..114250,114303..114422) DBX|Q96W52 BLOC|join(112693..113205,113251..113403,113596..113733,113816..114250,114324..114452) } EVD { PRG|sim4 DB|na_gadfly.dros.RELEASE2 CLA|mRNA DT|20041008 DBX|CT9961.2 BLOC|join(111775..112238,112529..112646,112703..113463,113584..113762, |113821..114249,114302..114464,114804..114902,114964..115107) } EVD { PRG|sim4 DB|na_ARGsCDS.dros CLA|mRNA DT|20041008 DBX|CDS-cin-RA BLOC|join(112616..112646,112703..113463,113584..113762,113821..114249, |114302..114464,114804..114902,114964..115104) } EVD { PRG|genie_masked DB|dummy CLA|genie_masked DT|20041008 BLOC|join(103672..104418,105204..106973,107116..107357,107448..107815, |107872..108113,108173..108363,108424..108585,108645..109182,109252..109625, |109891..110079,111845..112140,112703..113463,113584..113762,113821..114249, |114302..114485) } EVD { PRG|dmel_r3_to_dmel_r4_migration DB|dmel_r3_affy_oligos CLA|oligonucleotide DT|20050125 DBX|152241_at_1876 BLOC|114162..114186 DBX|152241_at_1897 BLOC|114183..114207 DBX|152241_at_1926 BLOC|114212..114236 DBX|152241_at_1971 BLOC|114309..114333 DBX|152241_at_2096 BLOC|114434..114458 DBX|152241_at_2132 BLOC|114809..114833 DBX|152241_at_2139 BLOC|114816..114840 DBX|152241_at_2163 BLOC|114840..114864 DBX|152241_at_2188 BLOC|114865..114889 DBX|152241_at_2231 BLOC|114969..114993 DBX|152241_at_2241 BLOC|114979..115003 DBX|152241_at_2272 BLOC|115010..115034 DBX|152241_at_2298 BLOC|115036..115060 DBX|152241_at_2323 BLOC|115061..115085 } EVD { PRG|tblastx_masked DB|na_dbEST.insect CLA|EST DBX|CK564713 BLOC|112699..113268 } EVD { PRG|tblastxwrap_masked DB|na_scf_chunk_agambiae.fa CLA|DNA DT|20041008 DBX|AAAB01008898.1p26 BLOC|111888..112139 DBX|AAAB01008859.1p40 BLOC|112864..113145 DBX|AAAB01008859.1p40 BLOC|113356..113466 DBX|AAAB01008859.1p40 BLOC|114089..114250 DBX|AAAB01008859.1p40 BLOC|114303..114410 DBX|AAAB01008859.1p40 BLOC|114964..115104 } EVD { PRG|sim4 DB|na_dbEST.same.dmel CLA|EST DBX|LD39954.5prime BLOC|join(112576..112646,112703..113188) DBX|RE02056.5prime BLOC|join(112506..112646,112703..113151) DBX|RE50474.5prime BLOC|join(112498..112646,112703..113176) DBX|RE73764.5prime BLOC|join(112498..112646,112703..113194) DBX|LD03207.5prime BLOC|112703..113128 DBX|LD47852:contig1 BLOC|join(112520..112646,112703..113117) DBX|LD47852:contig2 BLOC|join(114398..114464,114804..114902,114964..115272) DBX|RE71641.5prime BLOC|join(112498..112646,112703..113012) DBX|LD06372.5prime BLOC|join(112529..112646,112703..113374) DBX|LD46526.5prime BLOC|join(112532..112646,112703..113188) DBX|RE08509.5prime BLOC|join(112549..112646,112703..113113) DBX|LD14588.5prime BLOC|join(112565..112646,112703..113367) DBX|RE71642.5prime BLOC|join(112498..112646,112703..113077) DBX|RE72730.5prime BLOC|join(112568..112646,112703..113188) DBX|RE23878.5prime BLOC|join(112547..112646,112703..113188) DBX|RE51247.5prime BLOC|join(112509..112646,112703..113013) DBX|RE15103.5prime BLOC|join(112547..112646,112703..113266) DBX|LD22107.5prime BLOC|join(112596..112646,112703..113180) DBX|RE48937.5prime BLOC|join(112503..112646,112703..113161) DBX|RE72525.5prime BLOC|join(112568..112646,112703..113307) DBX|LD22617:contig2 BLOC|join(114389..114464,114804..114902,114964..115298) DBX|LD22617:contig1 BLOC|join(112510..112646,112703..113087) DBX|LD40205.5prime BLOC|join(112521..112646,112703..113079) DBX|RE33629.5prime BLOC|join(112537..112646,112703..113245) DBX|RE39963.5prime BLOC|join(112498..112646,112703..112980) DBX|RE03576.5prime BLOC|join(111922..112238,112703..112957) DBX|RE67435.5prime BLOC|join(112521..112646,112703..113269) DBX|LD13071.5prime BLOC|join(112555..112646,112703..113373) DBX|RE24061.5prime BLOC|join(112552..112646,112703..113261) DBX|LD10865.5prime BLOC|join(112550..112646,112703..112988) DBX|RE41991.5prime BLOC|join(112507..112646,112703..113176) DBX|RE26852.5prime BLOC|join(112491..112646,112703..113180) DBX|RE14303.5prime BLOC|join(112498..112646,112703..113176) DBX|RE71435.5prime BLOC|join(112498..112646,112703..113197) DBX|RE15720.5prime BLOC|join(112498..112646,112703..113161) DBX|RE50837.5prime BLOC|join(112503..112646,112703..113185) DBX|RE21975.5prime BLOC|join(112516..112646,112703..113175) DBX|RE49347.5prime BLOC|join(112509..112646,112703..113112) DBX|RE70182.5prime BLOC|join(112568..112646,112703..113272) DBX|RE19907.5prime BLOC|join(112516..112646,112703..113176) DBX|RE25619.5prime BLOC|join(112547..112646,112703..113276) DBX|RE19989.3prime BLOC|114964..115255 DBX|RE66625.5prime BLOC|join(112568..112646,112703..113188) DBX|GH09380:contig1 BLOC|join(111774..112238,112593..112646,112703..113077) DBX|GH09380:contig2 BLOC|join(113916..114249,114302..114464,114804..114902,114964..115153) DBX|RE30076.5prime BLOC|join(113630..113762,113821..114249,114302..114378) DBX|RE11076.5prime BLOC|join(112568..112646,112703..113188) DBX|RE59268.5prime BLOC|join(112509..112646,112703..113104) DBX|RE39219.5prime BLOC|join(112568..112646,112703..113299) } EVD { PRG|prosplign DB|aa_ncbi_other CLA|protein DT|20060123 DBX|NP_001013003 BLOC|join(111722..111763,111867..112151) DBX|NP_001019389 BLOC|join(112595..112646,112703..113184,113251..113463,113584..113762, |113821..114249,114302..114458,114804..114908) } EVD { PRG|sim4 DB|na_transcript.dmel.RELEASE32 CLA|mRNA DT|20041008 DBX|CG2945-RB.32 BLOC|join(111774..112238,112593..112646,112703..113463,113584..113762, |113821..114249,114302..114464,114804..114902,114964..115292) DBX|CG2945-RA.32 BLOC|join(112471..112646,112703..113463,113584..113762,113821..114249, |114302..114464,114804..114902,114964..115292) } EVD { PRG|sim4 DB|na_transcript.dmel.RELEASE31 CLA|mRNA DT|20041008 DBX|CG2945-RB.31 BLOC|join(111774..112238,112593..112646,112703..113463,113584..113762, |113821..114249,114302..114464,114804..114902,114964..115292) DBX|CG2945-RA.31 BLOC|join(112471..112646,112703..113463,113584..113762,113821..114249, |114302..114464,114804..114902,114964..115292) } EVD { PRG|sim4tandem DB|na_gb.dmel CLA|so DT|20050823 DBX|GH09380 BLOC|join(111774..112238,112593..112646,112703..113463,113584..113762, |113821..114249,114302..114464,114804..114902,114964..115240) DBX|AY312715 BLOC|112703..113463 DBX|AY312714 BLOC|112703..113463 DBX|AY312723 BLOC|112703..113463 DBX|AY312722 BLOC|112703..113463 DBX|AY312717 BLOC|112703..113463 DBX|AY312716 BLOC|112703..113463 DBX|AY312700 BLOC|112703..113463 DBX|AY312721 BLOC|112703..113463 DBX|AY312720 BLOC|112703..113463 DBX|AY312713 BLOC|112703..113463 DBX|AY312719 BLOC|112703..113463 DBX|AY312701 BLOC|112703..113463 DBX|AY312712 BLOC|112703..113463 DBX|AY312718 BLOC|112703..113463 DBX|AY312702 BLOC|112703..113463 DBX|AY312711 BLOC|112703..113463 DBX|AY312710 BLOC|112703..113463 DBX|AY312709 BLOC|112703..113463 DBX|AY312708 BLOC|112703..113463 DBX|AY312707 BLOC|112703..113463 DBX|AY312706 BLOC|112703..113463 DBX|AY312705 BLOC|112703..113463 DBX|AY312704 BLOC|112703..113463 DBX|AY312703 BLOC|112703..113463 DBX|L19876 BLOC|join(112703..113463,113584..113762,113821..114249,114302..114464, |114804..114902,114964..115107) } EVD { PRG|genscan_masked DB|dummy CLA|genscan_masked DT|20041008 BLOC|join(111891..112140,112703..113463,113584..113762,113821..114249, |114302..114464,114804..114902,114964..115107) } EVD { PRG|blastx_masked DB|aa_SPTR.insect CLA|protein DT|20041008 DBX|AAQ67538 BLOC|112705..113463 DBX|AAQ67542 BLOC|112705..113463 DBX|AAQ67541 BLOC|112705..113463 DBX|Q9GRD7 BLOC|join(113302..113460,113584..113769,113816..114250,114303..114464) DBX|Q9GRD8 BLOC|join(113305..113460,113584..113769,113816..114250,114303..114464) DBX|Q9GRD9 BLOC|join(113551..113769,113816..114250,114303..114464) } EVD { PRG|blastx_masked DB|aa_SPTR.rodent CLA|protein DT|20041008 DBX|Q8BGD8 BLOC|111891..112121 DBX|Q8BUV3 BLOC|join(112702..113184,113816..114250,114258..114422,114813..114908,114964..115077) DBX|Q03555 BLOC|join(112702..113184,113816..114250,114258..114422,114813..114908,114964..115077) DBX|Q8R0B1 BLOC|join(113335..113460,113620..113784,113816..114250,114258..114422, |114813..114908,114964..115077) } EVD { PRG|augustus DB|dummy CLA|augustus DT|20050713 BLOC|join(112616..112646,112703..113463,113584..113762,113821..114249,114302..114485) } EVD { PRG|blastx_masked DB|aa_SPTR.othvert CLA|protein DT|20041008 DBX|Q9PW38 BLOC|join(112702..113184,112966..113460,113620..113784,113816..114250, |114258..114422,114813..114908,114964..115077) } EVD { PRG|tblastxwrap_masked DB|na_baylorf1_scfchunk.dpse CLA|so DT|20041008 DBX|Contig2138_Contig8242-1 BLOC|111891..112163 DBX|Contig2138_Contig8242-1 BLOC|112702..113190 DBX|Contig2138_Contig8242-1 BLOC|113203..113487 DBX|Contig2138_Contig8242-1 BLOC|113548..113763 DBX|Contig2138_Contig8242-1 BLOC|113822..114088 DBX|Contig2138_Contig8242-1 BLOC|114083..114250 DBX|Contig2138_Contig8242-1 BLOC|114303..114467 DBX|Contig2138_Contig8242-1 BLOC|114804..114908 DBX|Contig2138_Contig8242-1 BLOC|114964..115104 } EVD { PRG|blastx_masked DB|aa_SPTR.dmel CLA|protein DT|20041008 DBX|P39205 BLOC|join(111891..112184,112702..113502,113536..113769,113816..114250, |114303..114467,114810..114908,114964..115104) DBX|AAQ67515 BLOC|112705..113463 DBX|AAQ67514 BLOC|112705..113463 DBX|AAQ67535 BLOC|112705..113463 DBX|AAQ67530 BLOC|112705..113463 DBX|AAQ67529 BLOC|112705..113463 DBX|AAQ67534 BLOC|112705..113463 DBX|AAQ67517 BLOC|112705..113463 DBX|AAQ67518 BLOC|112705..113463 DBX|AAQ67537 BLOC|112705..113463 DBX|AAQ67536 BLOC|112705..113463 DBX|AAQ67528 BLOC|112705..113463 DBX|AAQ67516 BLOC|112705..113463 DBX|AAQ67520 BLOC|112705..113463 DBX|AAQ67519 BLOC|112705..113463 DBX|AAQ67522 BLOC|112705..113463 DBX|AAQ67527 BLOC|112705..113463 DBX|AAQ67531 BLOC|112705..113463 DBX|AAQ67532 BLOC|112705..113463 DBX|AAQ67521 BLOC|112705..113463 DBX|AAQ67524 BLOC|112705..113463 DBX|AAQ67533 BLOC|112705..113463 DBX|AAQ67523 BLOC|112705..113463 DBX|AAQ67525 BLOC|112705..113463 DBX|AAQ67526 BLOC|112705..113463 } EVD { PRG|sim4 DB|na_dbEST.diff.dmel CLA|EST DBX|EK185562.5prime BLOC|join(114302..114464,114804..114902,114964..115180) DBX|EP05718.3prime BLOC|join(114812..114902,114964..115180) DBX|EK108203.5prime BLOC|join(114210..114249,114302..114464,114804..114902,114964..115067) DBX|EK245548.5prime BLOC|111789..112186 DBX|EK204154.5prime BLOC|111806..112181 DBX|EK256536.5prime BLOC|111806..112181 DBX|EK222046.5prime BLOC|join(114195..114249,114302..114464,114804..114878) DBX|EK117428.5prime BLOC|111734..111885 DBX|EK113007.5prime BLOC|111784..112138 DBX|EK161134.5prime BLOC|112014..112218 DBX|EK259755.5prime BLOC|112014..112218 DBX|AT12845.5prime BLOC|112720..113191 DBX|EK169546.5prime BLOC|join(113063..113463,113584..113690) } EVD { PRG|blastx_masked DB|aa_SPTR.plant CLA|protein DT|20041008 DBX|Q39054 BLOC|join(113263..113460,113623..113769,113816..114250,114303..114425) DBX|Q7XM29 BLOC|join(113323..113460,113623..113769,113816..114250,114303..114425) DBX|CAE54543 BLOC|join(113323..113460,113623..113769,113816..114250,114303..114425) } EVD { PRG|blastx_masked DB|aa_SPTR.worm CLA|protein DT|20041008 DBX|Q23069 BLOC|112702..113139 DBX|Q19242 BLOC|join(113341..113460,113611..113763,113816..114259,114318..114479, |114813..114923,114964..115077) } EVD { PRG|blastx_masked DB|aa_SPTR.primate CLA|protein DT|20041008 DBX|Q8TA88 BLOC|111891..112151 DBX|Q9NQX3 BLOC|join(112702..113184,113816..114250,114258..114422,114813..114908,114964..115077) DBX|Q9H4E9 BLOC|join(112702..113184,113816..114250,114258..114422,114813..114908,114964..115077) DBX|Q96KU4 BLOC|join(112702..113184,113816..114250,114258..114422,114813..114908,114964..115077) } EVD { PRG|sim4 DB|na_ARGs.dros CLA|mRNA DT|20041008 DBX|cin-RA BLOC|join(112471..112646,112703..113463,113584..113762,113821..114249, |114302..114464,114804..114902,114964..115292) } VERS|4.3 } # EOR GADR { RETE|ID 1 FBan0003777 GID 1 FBgn0024989 GSYM 1 CG3777 CGSYM 1 CG3777 ARM 1 X CLOC 1 1A1-1A5 SCAF 1 AE003417 TRREC 3 AALEN 3 879 ID|FBan0003777 SYM|CG3777 GENSR { GSYM|CG3777 ID|FBgn0024989 } ARM|X SCAF|AE003417 BLOC|136525..207026 CLOCC|1A1-1A5 SQLEN|70502 ID2|FBan0003777 |FBgn0025695 SYN|CK01670 |EG:125H10.1 |BEST:CK01670 EST|EK193659 |RH07461 |RH14057 |RH59323 |HL04030 |RH40470 |RH72954 |RH61716 |LP06894 |RE69090 |RE68979 |LD38292 |HL07341 |EK180636 |EN06559 |EK229560 |EK266071 |EK248129 |SD17974 |EK209333 |EK126940 |EK247440 |EK126908 |EK105821 |EK050616 |EK212503 |EK257401 |EK216322 |EP08208 |EK089406 |EK097306 |EK101904 |EP12048 |CK00406 |EP07928 |SD07452 |EP06728 |EP07956 |EP06756 |EP17306 |EK139822 |EK157415 |EK100462 |EK112748 |EK245164 |EK236220 |EK216012 |GM02562 |EK193908 |EK194208 |EK281621 |EK217438 |EK100806 |EK277654 |EK191430 |EK111525 |AT18705 |bs71d01 |bs17h08 |bs23f08 |bs54g01 |bs28b06 |bs01c08 |bs07e10 |bs63d03 |bs64f09 |AT21754 |bs04g02 |bs43g04 |EC28651 |bs34f11 |EK047928 |SD25735 |SD02026 |CK01708 |CK02552 |EK087802 |SD14015 |EK106535 |EK299902 |EK060654 CDNA|AT18705 |SD17974 |SD02026 AFFY|144341_at |144342_at |144042_at CMT|comment=DGC clone RH61716 appears problematic: incomplete CDS DT|20031201 TRREC { NAM|CG3777-RB SYN|FlyBase:FBtr0070066 |FlyBase:FBpp0070065 |GB_protein:AAN09013.1 |GB_protein:AAN09013.2 AANAM|CG3777-PB SQLEN|3354 AALEN|879 BLOC|join(136525..136579,200514..200655,202971..204529,204902..205060, |205469..206146,206266..207026) CDS|join(200642..200655,202971..204529,204902..205060,205469..206146,206266..206492) CMT|validation_flag=transposon in gene |protein_id=AAN09013 DT|20030221 } TRREC { NAM|CG3777-RC SYN|FlyBase:FBtr0070068 |FlyBase:FBpp0070067 |GB_protein:AAN09014.2 |GB_protein:AAN09014.1 AANAM|CG3777-PC SQLEN|3400 AALEN|879 BLOC|join(199867..199967,200514..200655,202971..204529,204902..205060, |205469..206146,206266..207026) CDS|join(200642..200655,202971..204529,204902..205060,205469..206146,206266..206492) CMT|protein_id=AAN09014 DT|20030221 } TRREC { NAM|CG3777-RA SYN|FlyBase:FBtr0070067 |FlyBase:FBpp0070066 |GB_protein:AAF45496.1 |GB_protein:AAF45496.2 |FlyBase:FBgn0077692 |FlyBase Annotation IDs:GA17682 |Dpse\GA17682 AANAM|CG3777-PA SQLEN|3374 AALEN|879 BLOC|join(199867..199941,200514..200655,202971..204529,204902..205060, |205469..206146,206266..207026) CDS|join(200642..200655,202971..204529,204902..205060,205469..206146,206266..206492) CMT|protein_id=AAF45496 |comment=based on homology to the obsolete gene model for Dmel CG3777-PB amino acids 24..696 in release 3.1 |comment=within this sequence range, | at least part of the putative ortholog of the D. melanogaster |gene CG3777 lives DT|20030221 } EVD { PRG|sim4 DB|na_gadfly.dros.RELEASE2 CLA|mRNA DT|20041008 DBX|CT32706.2 BLOC|join(164551..164714,164912..165764) DBX|CT39803.2 BLOC|join(171945..172450,172597..173236) DBX|CT12604.2 BLOC|join(203263..204529,204902..205060,205469..206146,206266..206640) } EVD { PRG|repeatmasker DB|dummy CLA|RepeatMasker:dummy DT|20041008 DBX|X80025 BLOC|137403..137529 DBX|U66884 BLOC|145195..145323 DBX|U66884 BLOC|162509..162610 DBX|Z27119 BLOC|175348..180376 DBX|U66884 BLOC|180967..181012 DBX|U66884 BLOC|186388..186484 DBX|U66884 BLOC|191956..191993 DBX|AJ309320 BLOC|204722..204788 } EVD { PRG|genie_masked DB|dummy CLA|genie_masked DT|20041008 BLOC|165030..165617 BLOC|join(202685..202719,202971..204529,204902..205060,205469..206146,206266..206495) } EVD { PRG|dmel_r3_to_dmel_r4_migration DB|dmel_r3_affy_oligos CLA|oligonucleotide DT|20050125 DBX|144341_at_58 BLOC|165075..165099 DBX|144341_at_90 BLOC|165107..165131 DBX|144341_at_198 BLOC|165215..165239 DBX|144341_at_238 BLOC|165255..165279 DBX|144341_at_264 BLOC|165281..165305 DBX|144341_at_288 BLOC|165305..165329 DBX|144341_at_290 BLOC|165307..165331 DBX|144341_at_325 BLOC|165342..165366 DBX|144341_at_328 BLOC|165345..165369 DBX|144341_at_357 BLOC|165374..165398 DBX|144341_at_447 BLOC|165464..165488 DBX|144341_at_472 BLOC|165489..165513 DBX|144341_at_513 BLOC|165530..165554 DBX|144341_at_546 BLOC|165563..165587 DBX|144342_at_555 BLOC|172633..172657 DBX|144342_at_603 BLOC|172681..172705 DBX|144342_at_605 BLOC|172683..172707 DBX|144342_at_636 BLOC|172714..172738 DBX|144342_at_665 BLOC|172743..172767 DBX|144342_at_694 BLOC|172772..172796 DBX|144342_at_710 BLOC|172788..172812 DBX|144342_at_734 BLOC|172812..172836 DBX|144342_at_751 BLOC|172829..172853 DBX|144342_at_816 BLOC|172894..172918 DBX|144342_at_834 BLOC|172912..172936 DBX|144342_at_900 BLOC|172978..173002 DBX|144342_at_989 BLOC|173067..173091 DBX|144342_at_1036 BLOC|173114..173138 DBX|144042_at_1903 BLOC|205933..205957 DBX|144042_at_1917 BLOC|205947..205971 DBX|144042_at_2015 BLOC|206045..206069 DBX|144042_at_2057 BLOC|206087..206111 DBX|144042_at_2084 BLOC|206114..206138 DBX|144042_at_2122 BLOC|206271..206295 DBX|144042_at_2183 BLOC|206332..206356 DBX|144042_at_2214 BLOC|206363..206387 DBX|144042_at_2298 BLOC|206447..206471 DBX|144042_at_2332 BLOC|206481..206505 DBX|144042_at_2358 BLOC|206507..206531 DBX|144042_at_2386 BLOC|206535..206559 DBX|144042_at_2405 BLOC|206554..206578 DBX|144042_at_2428 BLOC|206577..206601 } EVD { PRG|tblastxwrap_masked DB|na_scf_chunk_agambiae.fa CLA|DNA DT|20041008 DBX|AAAB01008816.1p11 BLOC|145861..146052 } EVD { PRG|sim4 DB|na_dbEST.same.dmel CLA|EST DBX|RH07461.5prime BLOC|159465..160114 DBX|RH14057.5prime BLOC|159465..160086 DBX|RH59323.5prime BLOC|178120..178763 DBX|HL04030.5prime BLOC|159227..159519 DBX|RH40470.5prime BLOC|181804..182395 DBX|RH72954.5prime BLOC|159431..159902 DBX|RH61716:contig1 BLOC|join(204264..204529,204902..205060,205469..205574) DBX|RH61716:contig2 BLOC|206522..207026 DBX|LP06894.5prime BLOC|join(204977..205060,205469..205979) DBX|RE69090.5prime BLOC|join(199867..199941,200514..200655,202971..203337) DBX|RE68979.5prime BLOC|join(199867..199967,200514..200655,202971..203354) DBX|LD38292.3prime BLOC|join(206091..206146,206266..207024) DBX|HL07341.5prime BLOC|154077..154416 } EVD { PRG|sim4 DB|na_transcript.dmel.RELEASE32 CLA|mRNA DT|20041008 DBX|CG3777-RB.32 BLOC|join(136525..136579,200514..200655,202971..204529,204902..205060, |205469..206146,206266..207026) DBX|CG12470-RA.32 BLOC|join(164506..164714,164912..165764) DBX|CG17885-RA.32 BLOC|join(171945..172450,172597..173200,173311..173379) DBX|CG3777-RC.32 BLOC|join(199867..199967,200514..200655,202971..204529,204902..205060, |205469..206146,206266..207026) DBX|CG3777-RA.32 BLOC|join(199867..199941,200514..200655,202971..204529,204902..205060, |205469..206146,206266..207026) } EVD { PRG|sim4 DB|na_transcript.dmel.RELEASE31 CLA|mRNA DT|20041008 DBX|CG3777-RB.31 BLOC|join(136525..136579,200514..200655,202971..204529,204902..205060, |205469..206146,206266..207026) DBX|CG12470-RA.31 BLOC|join(164506..164714,164912..165764) DBX|CG17885-RA.31 BLOC|join(171945..172450,172597..173200,173311..173379) DBX|CG3777-RA.31 BLOC|join(199867..199941,200514..200655,202971..204529,204902..205060, |205469..206146,206266..207026) DBX|CG3777-RC.31 BLOC|join(199867..199967,200514..200655,202971..204529,204902..205060, |205469..206146,206266..207026) } EVD { PRG|sim4tandem DB|na_gb.dmel CLA|so DT|20050823 DBX|AY312673 BLOC|203263..204487 DBX|AY312672 BLOC|203263..204487 DBX|AY312671 BLOC|203263..204487 DBX|AY312690 BLOC|203263..204487 DBX|AY312692 BLOC|203263..204487 DBX|AY312684 BLOC|203263..204487 DBX|AY312685 BLOC|203263..204487 DBX|AY312689 BLOC|203263..204487 DBX|AY312693 BLOC|203263..204487 DBX|AY312694 BLOC|203263..204487 DBX|AY312691 BLOC|203263..204487 DBX|AY312688 BLOC|203263..204487 DBX|AY312687 BLOC|203263..204487 DBX|SD17974 BLOC|join(136525..136579,200514..200655,202971..204529,204902..205060, |205469..206146,206266..207026) DBX|X04132 BLOC|join(153130..159172,159237..160097) DBX|Z27119 BLOC|175343..180381 DBX|SD02026 BLOC|176836..180385 DBX|AY312683 BLOC|203263..204487 DBX|AY312682 BLOC|203263..204487 DBX|AY312681 BLOC|203263..204487 DBX|AY312680 BLOC|203263..204487 DBX|AY312679 BLOC|203263..204487 DBX|AY312678 BLOC|203263..204487 DBX|AY312677 BLOC|203263..204487 DBX|AY312676 BLOC|203263..204487 DBX|AY312675 BLOC|203263..204487 DBX|AY312686 BLOC|203263..204487 DBX|AY312674 BLOC|203263..204487 } EVD { PRG|genscan_masked DB|dummy CLA|genscan_masked DT|20041008 BLOC|151829..152095 BLOC|165030..165617 BLOC|join(171945..172284,172992..173200,173311..173379) BLOC|join(196248..196322,199104..199184,199880..199993,201045..201255, |202028..202200,202678..202760,202971..204529,204926..205060,205469..206146, |206266..206495) } EVD { PRG|blastx_masked DB|aa_SPTR.insect CLA|protein DT|20041008 DBX|AAQ67511 BLOC|203332..204456 DBX|AAQ67510 BLOC|203332..204456 DBX|AAQ67513 BLOC|203332..204456 } EVD { PRG|prosplign DB|aa_ncbi_dmel CLA|protein DT|20060123 DBX|AAT94530 BLOC|165030..165614 } EVD { PRG|augustus DB|dummy CLA|augustus DT|20050713 BLOC|165030..165617 BLOC|join(172074..172284,203009..204529,204902..205060,205469..206146, |206266..206433,216439..216951,217648..217761,233843..233982) } EVD { PRG|repeat_runner_seg DB|dummy CLA|repeat_runner_seg DT|20041008 BLOC|137393..137485 BLOC|138893..139351 BLOC|141959..142085 BLOC|144972..145101 BLOC|145185..145333 BLOC|147625..147921 BLOC|149438..149826 BLOC|152716..160307 BLOC|160484..160615 BLOC|161937..162039 BLOC|162499..162620 BLOC|163436..163767 BLOC|171195..171343 BLOC|175338..180386 BLOC|182518..182656 BLOC|186378..186494 BLOC|191946..192003 BLOC|194120..194396 BLOC|198469..198550 BLOC|204712..204798 } EVD { PRG|tblastxwrap_masked DB|na_baylorf1_scfchunk.dpse CLA|so DT|20041008 DBX|Contig7446_Contig2444-15 BLOC|143409..143552 DBX|Contig7446_Contig2444-15 BLOC|143763..143873 DBX|Contig7446_Contig2444-15 BLOC|145870..146103 DBX|Contig7446_Contig2444-15 BLOC|165033..165614 DBX|Contig502_Contig4001-7 BLOC|165189..165371 DBX|Contig502_Contig4001-7 BLOC|165378..165515 DBX|Contig7446_Contig2444-15 BLOC|172047..172262 DBX|Contig7446_Contig2444-15 BLOC|172311..172451 DBX|Contig7446_Contig2444-15 BLOC|172553..173206 DBX|Contig3342_Contig5418-4 BLOC|172793..173209 DBX|Contig7446_Contig2444-15 BLOC|203173..203361 DBX|Contig7446_Contig2444-16 BLOC|203173..203361 DBX|Contig7446_Contig2444-16 BLOC|203377..203649 DBX|Contig7446_Contig2444-15 BLOC|203377..203649 DBX|Contig7446_Contig2444-16 BLOC|203617..203793 DBX|Contig7446_Contig2444-15 BLOC|203617..203793 DBX|Contig7446_Contig2444-16 BLOC|203656..204054 DBX|Contig7446_Contig2444-15 BLOC|203656..204054 DBX|Contig7446_Contig2444-16 BLOC|203917..204294 DBX|Contig7446_Contig2444-15 BLOC|203917..204294 DBX|Contig7446_Contig2444-16 BLOC|204901..205065 DBX|Contig7446_Contig2444-15 BLOC|204901..205065 DBX|Contig7446_Contig2444-16 BLOC|205627..205884 DBX|Contig7446_Contig2444-15 BLOC|205627..205884 } EVD { PRG|sim4 DB|na_dbEST.diff.dmel CLA|EST DBX|EK193659.5prime BLOC|206890..207225 DBX|EK180636.5prime BLOC|154302..154762 DBX|EN06559.5prime BLOC|152903..153168 DBX|EK229560.5prime BLOC|153540..153970 DBX|EK266071.5prime BLOC|153538..154058 DBX|EK248129.5prime BLOC|153540..154028 DBX|SD17974:contig1 BLOC|join(136525..136579,200514..200655,202971..203276) DBX|SD17974:contig2 BLOC|206441..207024 DBX|EK209333.5prime BLOC|152901..153380 DBX|EK126940.5prime BLOC|206887..207225 DBX|EK247440.5prime BLOC|join(199896..199967,200514..200655,202971..203219) DBX|EK126908.5prime BLOC|206887..207225 DBX|EK105821.5prime BLOC|206448..206749 DBX|EK050616.5prime BLOC|153554..153905 DBX|EK212503.5prime BLOC|148901..149103 DBX|EK257401.5prime BLOC|153544..153727 DBX|EK216322.5prime BLOC|152901..153096 DBX|EP08208.3prime BLOC|153646..154028 DBX|EK089406.5prime BLOC|153544..153933 DBX|EK097306.5prime BLOC|153550..153896 DBX|EK101904.5prime BLOC|153550..153949 DBX|EP12048.3prime BLOC|159315..159746 DBX|CK00406.3prime BLOC|179960..180384 DBX|EP07928.3prime BLOC|158302..158771 DBX|SD07452.3prime BLOC|153103..153683 DBX|EP06728.3prime BLOC|158434..158771 DBX|EP07956.3prime BLOC|158301..158771 DBX|EP06756.3prime BLOC|158485..158771 DBX|EP17306.3prime BLOC|162963..163404 DBX|EK139822.5prime BLOC|154424..154830 DBX|EK157415.5prime BLOC|154549..155175 DBX|EK100462.5prime BLOC|155109..155427 DBX|EK112748.5prime BLOC|155751..156198 DBX|EK245164.5prime BLOC|156668..157129 DBX|EK236220.5prime BLOC|156668..157077 DBX|EK216012.5prime BLOC|156825..157322 DBX|GM02562:contig2 BLOC|join(158846..159225,159285..159458) DBX|GM02562:contig1 BLOC|157933..158363 DBX|EK193908.5prime BLOC|158087..158532 DBX|EK194208.5prime BLOC|158087..158522 DBX|EK281621.5prime BLOC|158095..158569 DBX|EK217438.5prime BLOC|158235..158726 DBX|EK100806.5prime BLOC|join(158925..159212,159276..159343) DBX|EK277654.5prime BLOC|join(158979..159212,159276..159343) DBX|EK191430.5prime BLOC|join(158979..159151,159214..159475) DBX|EK111525.5prime BLOC|162837..163299 DBX|AT18705.5prime BLOC|join(164506..164714,164912..165000) DBX|bs71d01.y1 BLOC|join(164509..164714,164912..165284) DBX|bs17h08.y1 BLOC|join(164514..164714,164912..165075) DBX|bs23f08.y1 BLOC|join(164514..164714,164912..165183) DBX|bs54g01.y1 BLOC|join(164514..164714,164912..165284) DBX|bs28b06.y1 BLOC|join(164520..164714,164912..165151) DBX|bs01c08.y1 BLOC|join(164556..164714,164912..165150) DBX|bs07e10.y1 BLOC|join(164556..164714,164912..165053) DBX|bs63d03.y1 BLOC|join(164556..164714,164912..165068) DBX|bs64f09.y1 BLOC|join(164560..164714,164912..165293) DBX|AT21754.5prime BLOC|join(164562..164714,164912..165080) DBX|bs04g02.y1 BLOC|join(164567..164714,164912..165350) DBX|bs43g04.y1 BLOC|join(164567..164714,164912..165322) DBX|EC28651.5prime BLOC|164965..165347 DBX|bs34f11.y1 BLOC|165331..165726 DBX|EK047928.5prime BLOC|175552..176015 DBX|SD25735.5prime BLOC|176642..177246 DBX|SD02026:contig2 BLOC|179862..180383 DBX|SD02026:contig1 BLOC|176836..177426 DBX|CK01708.5prime BLOC|177086..177748 DBX|CK02552.5prime BLOC|177302..177699 DBX|EK087802.5prime BLOC|177474..177862 DBX|SD14015.5prime BLOC|177566..178201 DBX|EK106535.5prime BLOC|178798..179150 DBX|EK299902.5prime BLOC|join(204478..204529,204902..205060,205469..205558) DBX|EK060654.5prime BLOC|join(206080..206146,206266..206655) } EVD { PRG|blastx_masked DB|aa_SPTR.dmel CLA|protein DT|20041008 DBX|AAQ67493 BLOC|203332..204456 DBX|AAQ67492 BLOC|203332..204456 DBX|AAQ67490 BLOC|203332..204456 DBX|AAQ67488 BLOC|203332..204456 DBX|AAQ67487 BLOC|203332..204456 DBX|AAQ67485 BLOC|203332..204456 DBX|AAQ67500 BLOC|203332..204456 DBX|AAQ67486 BLOC|203332..204456 DBX|AAQ67499 BLOC|203332..204456 DBX|AAQ67504 BLOC|203332..204456 DBX|AAQ67498 BLOC|203332..204456 DBX|AAQ67497 BLOC|203332..204456 DBX|AAQ67495 BLOC|203332..204456 DBX|AAQ67502 BLOC|203332..204456 DBX|AAQ67507 BLOC|203332..204456 DBX|AAQ67506 BLOC|203332..204456 DBX|AAQ67505 BLOC|203332..204456 DBX|AAQ67494 BLOC|203332..204456 DBX|AAQ67508 BLOC|203332..204456 DBX|AAQ67496 BLOC|203332..204456 DBX|AAQ67489 BLOC|203332..204456 DBX|AAQ67501 BLOC|203332..204456 DBX|AAQ67491 BLOC|203332..204456 DBX|AAQ67503 BLOC|203332..204456 DBX|O76874 BLOC|join(203332..204531,204901..205077,205471..206145,206208..206387) DBX|Q9VLP5 BLOC|206579..206608 DBX|Q8MKZ3 BLOC|141501..141707 DBX|Q9BMD5 BLOC|141501..141707 DBX|Q8MKZ2 BLOC|141501..141707 DBX|Q9BMD4 BLOC|141501..141707 DBX|Q9V5X3 BLOC|141501..141707 DBX|Q9VAN4 BLOC|146856..146990 DBX|Q9V3G9 BLOC|165126..165614 DBX|Q9VW23 BLOC|165192..165515 DBX|Q9W5G6 BLOC|join(171945..172451,172598..173203) DBX|AAO41494 BLOC|172433..173203 DBX|Q9V9X1 BLOC|173752..173859 DBX|Q960V7 BLOC|173752..173859 DBX|Q9VLP5 BLOC|180762..180923 DBX|Q9VAN4 BLOC|185913..185957 DBX|Q9VAN4 BLOC|187476..187739 DBX|AAQ23522 BLOC|join(202972..204531,204901..205077,205471..206145,206208..206387) } EVD { PRG|splign DB|na_cDNA_ncbi CLA|cDNA DT|20050907 DBX|AT18705 BLOC|join(164506..164714,164912..165761) } EVD { PRG|promoter DB|dummy CLA|promoter DT|20041008 BLOC|137669..137670 BLOC|142071..142072 BLOC|147685..147686 BLOC|150533..150534 BLOC|154266..154267 BLOC|158624..158625 BLOC|166614..166615 BLOC|170971..170972 BLOC|173613..173614 BLOC|175480..175481 BLOC|191610..191611 BLOC|192706..192707 BLOC|193935..193936 BLOC|195285..195286 BLOC|195922..195923 BLOC|199783..199784 BLOC|201694..201695 BLOC|205024..205025 BLOC|205581..205582 } VERS|4.3 } # EOR GADR { RETE|ID 1 FBan0013373 GID 1 FBgn0029522 GSYM 1 CG13373 CGSYM 1 CG13373 ARM 1 X CLOC 1 1B4-1B4 SCAF 1 AE003417 TRREC 1 AALEN 1 124 ID|FBan0013373 SYM|CG13373 GENSR { GSYM|CG13373 ID|FBgn0029522 } ARM|X SCAF|AE003417 BLOC|334343..335005 CLOCC|1B4-1B4 SQLEN|663 ID2|FBan0013373 EST|ESG013b |LD08762 AFFY|144343_at DT|20031201 TRREC { NAM|CG13373-RA SYN|FlyBase:FBtr0070076 |FlyBase:FBpp0070075 |GB_protein:AAF45505.1 |FlyBase:FBgn0072283 |FlyBase Annotation IDs:GA12237 |Dpse\GA12237 AANAM|CG13373-PA SQLEN|582 AALEN|124 BLOC|join(334343..334753,334835..335005) CDS|join(334443..334753,334835..334895) CMT|protein_id=AAF45505 |comment=Range of putative ortholog from tblastn was extended |to cover the gene prediction DT|20020618 } EVD { PRG|sim4 DB|na_transcript.dmel.RELEASE31 CLA|mRNA DT|20041008 DBX|CG13373-RA.31 BLOC|join(334343..334753,334835..335005) } EVD { PRG|sim4 DB|na_gadfly.dros.RELEASE2 CLA|mRNA DT|20041008 DBX|CT32703.2 BLOC|join(334345..334753,334835..335005) } EVD { PRG|prosplign DB|aa_ncbi_dmel CLA|protein DT|20060123 DBX|AAT47771 BLOC|join(334443..334753,334835..334895) } EVD { PRG|genie_masked DB|dummy CLA|genie_masked DT|20041008 BLOC|join(333969..334113,334429..334723,334835..334898) } EVD { PRG|augustus DB|dummy CLA|augustus DT|20050713 BLOC|join(333969..334113,334429..334753,334835..334898) } EVD { PRG|tblastxwrap_masked DB|na_baylorf1_scfchunk.dpse CLA|so DT|20041008 DBX|Contig7446_Contig2444-16 BLOC|334542..334754 } EVD { PRG|blastx_masked DB|aa_SPTR.dmel CLA|protein DT|20041008 DBX|AAS15656 BLOC|334427..334645 DBX|Q9I7Z9 BLOC|334443..334787 DBX|Q9W5G0 BLOC|334443..334787 DBX|Q8IRY8 BLOC|334443..334787 } EVD { PRG|sim4 DB|na_dbEST.diff.dmel CLA|EST DBX|ESG013b.E21_D07.3prime BLOC|join(334039..334113,334429..334753,334835..334988) } EVD { PRG|dmel_r3_to_dmel_r4_migration DB|dmel_r3_affy_oligos CLA|oligonucleotide DT|20050125 DBX|144343_at_163 BLOC|334350..334374 DBX|144343_at_532 BLOC|334719..334743 DBX|144343_at_198 BLOC|334385..334409 DBX|144343_at_608 BLOC|334876..334900 DBX|144343_at_219 BLOC|334406..334430 DBX|144343_at_261 BLOC|334448..334472 DBX|144343_at_279 BLOC|334466..334490 DBX|144343_at_311 BLOC|334498..334522 DBX|144343_at_338 BLOC|334525..334549 DBX|144343_at_374 BLOC|334561..334585 DBX|144343_at_402 BLOC|334589..334613 DBX|144343_at_454 BLOC|334641..334665 } EVD { PRG|sim4 DB|na_dbEST.same.dmel CLA|EST DBX|LD08762.5prime BLOC|join(334343..334753,334835..335005) } EVD { PRG|sim4 DB|na_transcript.dmel.RELEASE32 CLA|mRNA DT|20041008 DBX|CG13373-RA.32 BLOC|join(334343..334753,334835..335005) } VERS|4.3 } # EOR GADR { RETE|ID 1 FBan0002995 GID 1 FBgn0040372 GSYM 1 CG2995 CGSYM 1 CG2995 ARM 1 X CLOC 1 1A1-1A1 SCAF 1 AE003417 TRREC 1 AALEN 1 1637 ID|FBan0002995 SYM|CG2995 GENSR { GSYM|CG2995 ID|FBgn0040372 } ARM|X SCAF|AE003417 BLOC|102829..110847 CLOCC|1A1-1A1 SQLEN|8019 GO|protein biosynthesis ; GO:0006412 |methyltransferase activity ; GO:0008168 |nucleobase, nucleoside, nucleotide and nucleic acid metabolism ; GO:0006139 |chromatin modification ; GO:0016568 |translation initiation factor activity ; GO:0003743 |nucleic acid binding ; GO:0003676 |zinc ion binding ; GO:0008270 |chromatin binding ; GO:0003682 |DNA-methyltransferase activity ; GO:0009008 |translation factor activity, nucleic acid binding ; GO:0008135 |transferase activity ; GO:0016740 |chromatin assembly or disassembly ; GO:0006333 |protein metabolism ; GO:0019538 |histone-lysine N-methyltransferase activity ; GO:0018024 ID2|FBan0002995 |FBgn0029516 SYN|EG:BACR37P7.2 |cab65850 G9a Dm EST|EK302431 |EK139730 |EK076808 |EK084508 |EK267434 |EK266541 |EK267031 |EK143663 |EK141313 |EK202962 |EK254206 |EK069908 |GM19374 |LD10743 CDNA|LD10743 AFFY|153708_at DT|20031201 TRREC { NAM|CG2995-RA SYN|FlyBase:FBtr0070063 |FlyBase:FBpp0070062 |GB_protein:AAF45487.2 |FlyBase:FBgn0075582 |FlyBase Annotation IDs:GA15565 |Dpse\GA15565 AANAM|CG2995-PA SQLEN|6521 AALEN|1637 BLOC|join(102829..104418,105204..107060,107116..107357,107448..107815, |107872..108113,108173..108363,108424..108585,108645..109182,109252..109625, |109891..110847) CDS|join(103672..104418,105204..107060,107116..107357,107448..107815, |107872..108113,108173..108363,108424..108585,108645..109182,109252..109625, |109891..110080) CMT|protein_id=AAF45487 |comment=Range of putative ortholog from tblastn was extended |to cover the gene prediction DT|20020617 } EVD { PRG|blastx_masked DB|aa_SPTR.othinv CLA|protein DT|20041008 DBX|CAF06044 BLOC|109258..109623 DBX|Q8X225 BLOC|109258..109623 DBX|O60016 BLOC|109258..109623 } EVD { PRG|sim4 DB|na_transcript.dmel.RELEASE31 CLA|mRNA DT|20041008 DBX|CG2995-RA.31 BLOC|join(102829..104418,105204..107060,107116..107357,107448..107815, |107872..108113,108173..108363,108424..108585,108645..109182,109252..109625, |109891..110847) } EVD { PRG|sim4tandem DB|na_gb.dmel CLA|cDNA DT|20050823 DBX|LD10743 BLOC|join(102829..104418,105204..107060,107116..107357,107448..107815, |107872..108113,108173..108363,108424..108585,108645..109182,109252..109625, |109891..110847) } EVD { PRG|genscan_masked DB|dummy CLA|genscan_masked DT|20041008 BLOC|join(103672..104418,105204..107060,107116..107357,107448..107815, |107872..108113,108212..108363,108424..108585,108645..109182,109252..109625, |109891..110083) } EVD { PRG|sim4 DB|na_gadfly.dros.RELEASE2 CLA|mRNA DT|20041008 DBX|CT10081.2 BLOC|join(102831..103398,103667..104418,105204..107060,107116..107357, |107448..107815,107872..108113,108212..108363,108424..108585,108645..109182, |109252..109625,109891..110083) } EVD { PRG|blastx_masked DB|aa_SPTR.insect CLA|protein DT|20041008 DBX|Q7PR32 BLOC|join(106275..106577,106821..107003,107113..107349,107868..108113, |108170..108583,108443..108586,108646..109179,109255..109461) } EVD { PRG|blastx_masked DB|aa_SPTR.rodent CLA|protein DT|20041008 DBX|AAH58357 BLOC|join(106215..107057,107260..107289,107734..107814,107901..108110, |108646..109176,109255..109623,109892..109972) DBX|Q9Z148 BLOC|join(106215..107057,107260..107289,107734..107814,107901..108110, |108646..109176,109255..109623,109892..109972) DBX|Q8BP38 BLOC|join(108646..109176,109255..109623,109892..109972) } EVD { PRG|augustus DB|dummy CLA|augustus DT|20050713 BLOC|join(102485..102536,103667..104014,105553..107060,107116..107357, |107448..107815,107872..108113,108173..108363,108424..108585,108645..108787, |108851..109182,109252..109625,109891..110083) } EVD { PRG|genie_masked DB|dummy CLA|genie_masked DT|20041008 BLOC|join(103672..104418,105204..106973,107116..107357,107448..107815, |107872..108113,108173..108363,108424..108585,108645..109182,109252..109625, |109891..110079,111845..112140,112703..113463,113584..113762,113821..114249, |114302..114485) } EVD { PRG|blastx_masked DB|aa_SPTR.othvert CLA|protein DT|20041008 DBX|CAE49087 BLOC|join(106335..107054,107755..107814,107901..108113,108646..109176, |109255..109623,109892..109972) } EVD { PRG|tblastxwrap_masked DB|na_baylorf1_scfchunk.dpse CLA|so DT|20041008 DBX|Contig2137_Contig7031-1 BLOC|107871..108122 DBX|Contig2137_Contig7031-1 BLOC|108170..108364 DBX|Contig2137_Contig7031-1 BLOC|108422..108586 DBX|Contig2137_Contig7031-1 BLOC|108646..109185 DBX|Contig2137_Contig7031-1 BLOC|109252..109626 DBX|Contig3773_Contig4795-1 BLOC|109429..109623 DBX|Contig2137_Contig7031-1 BLOC|109874..110023 DBX|Contig2137_Contig7031-1 BLOC|103669..103845 DBX|Contig2137_Contig7031-1 BLOC|105660..105761 DBX|Contig2137_Contig7031-1 BLOC|105960..106169 DBX|Contig2137_Contig7031-1 BLOC|106116..106643 DBX|Contig2137_Contig7031-1 BLOC|106809..107066 DBX|Contig2137_Contig7031-1 BLOC|107107..107202 DBX|Contig2137_Contig7031-1 BLOC|107206..107358 DBX|Contig2137_Contig7031-1 BLOC|107566..107820 DBX|Contig2137_Contig7031-1 BLOC|107867..107998 } EVD { PRG|sim4 DB|na_dbEST.diff.dmel CLA|EST DBX|EK302431.5prime BLOC|110287..110719 DBX|EK139730.5prime BLOC|110183..110478 DBX|EK076808.5prime BLOC|110133..110580 DBX|EK084508.5prime BLOC|110133..110660 DBX|EK267434.5prime BLOC|join(109501..109625,109891..110030) DBX|EK266541.5prime BLOC|join(109501..109625,109891..110253) DBX|EK267031.5prime BLOC|join(109382..109625,109891..110111) DBX|EK143663.5prime BLOC|106406..106870 DBX|EK141313.5prime BLOC|join(108323..108363,108424..108585,108645..108706) DBX|EK202962.5prime BLOC|106451..106939 DBX|EK254206.5prime BLOC|110408..110774 DBX|EK069908.5prime BLOC|110754..111132 DBX|GM19374.5prime BLOC|103136..103662 } EVD { PRG|blastx_masked DB|aa_SPTR.dmel CLA|protein DT|20041008 DBX|Q9V3K8 BLOC|join(103672..104421,105273..107066,107002..107358,107449..107814, |107868..108116,108158..108361,108434..108586,108646..109185,109255..109623, |109892..110080) DBX|Q95RU8 BLOC|join(103672..104421,105273..107066,107002..107358,107449..107814, |107868..108113,108170..108361,108434..108586,108646..109185,109255..109623, |109892..110080) DBX|Q8MKZ2 BLOC|105549..105653 DBX|Q9V5X3 BLOC|105549..105653 DBX|Q9BMD5 BLOC|105549..105653 DBX|Q9VAN4 BLOC|105591..105686 DBX|P45975 BLOC|109255..109623 DBX|P42124 BLOC|109255..109626 DBX|Q960X1 BLOC|join(109255..109455,109462..109626) DBX|Q8MMD1 BLOC|join(109255..109455,109462..109626) DBX|Q8IHC9 BLOC|join(109255..109455,109462..109626) } EVD { PRG|dmel_r3_to_dmel_r4_migration DB|dmel_r3_affy_oligos CLA|oligonucleotide DT|20050125 DBX|153708_at_5481 BLOC|110236..110260 DBX|153708_at_5514 BLOC|110269..110293 DBX|153708_at_5523 BLOC|110278..110302 DBX|153708_at_5662 BLOC|110417..110441 DBX|153708_at_5679 BLOC|110434..110458 DBX|153708_at_5714 BLOC|110469..110493 DBX|153708_at_5729 BLOC|110484..110508 DBX|153708_at_5778 BLOC|110533..110557 DBX|153708_at_5786 BLOC|110541..110565 DBX|153708_at_5822 BLOC|110577..110601 DBX|153708_at_5830 BLOC|110585..110609 DBX|153708_at_5921 BLOC|110676..110700 DBX|153708_at_5941 BLOC|110696..110720 DBX|153708_at_6007 BLOC|110762..110786 } EVD { PRG|blastx_masked DB|aa_SPTR.worm CLA|protein DT|20041008 DBX|Q95Y12 BLOC|join(109093..109176,109255..109623) DBX|O17186 BLOC|join(109258..109623,109889..109972) DBX|Q8MXT0 BLOC|109291..109623 } EVD { PRG|tblastxwrap_masked DB|na_scf_chunk_agambiae.fa CLA|DNA DT|20041008 DBX|AAAB01008859.1p4 BLOC|106821..107066 DBX|AAAB01008859.1p4 BLOC|108637..108846 DBX|AAAB01008859.1p4 BLOC|109312..109461 DBX|AAAB01008888.1p15 BLOC|109453..109623 DBX|AAAB01008859.1p4 BLOC|109462..109626 } EVD { PRG|blastx_masked DB|aa_SPTR.primate CLA|protein DT|20041008 DBX|Q96KQ7 BLOC|join(106389..107057,107260..107289,108164..108580,108443..108619, |108646..109176,109255..109623,109892..109972) DBX|Q9H9B1 BLOC|join(106872..107057,107116..107223,108170..108367,108646..109176, |109255..109623,109892..109972) DBX|AAQ04808 BLOC|join(109330..109623,109892..109972) } EVD { PRG|sim4 DB|na_dbEST.same.dmel CLA|EST DBX|LD10743:contig1 BLOC|102829..103465 DBX|LD10743:contig2 BLOC|110213..110835 } EVD { PRG|sim4 DB|na_transcript.dmel.RELEASE32 CLA|mRNA DT|20041008 DBX|CG2995-RA.32 BLOC|join(102829..104418,105204..107060,107116..107357,107448..107815, |107872..108113,108173..108363,108424..108585,108645..109182,109252..109625, |109891..110847) } VERS|4.3 } # EOR GADR { RETE|ID 1 FBan0003038 GID 1 FBgn0040373 GSYM 1 CG3038 CGSYM 1 CG3038 ARM 1 X CLOC 1 1A1-1A1 SCAF 1 AE003417 TRREC 2 AALEN 2 358 ID|FBan0003038 SYM|CG3038 GENSR { GSYM|CG3038 ID|FBgn0040373 } ARM|X SCAF|AE003417 BLOC|complement(100872..102664) CLOCC|1A1-1A1 SQLEN|1793 GO|UDP-galactose:beta-N-acetylglucosamine beta-1,3-galactosyltransferase activity ; GO:0008499 |transferase activity, transferring glycosyl groups ; GO:0016757 |membrane ; GO:0016020 |protein amino acid glycosylation ; GO:0006486 ID2|FBan0003038 |FBgn0029515 SYN|EG:BACR37P7.1 EST|RE53647 |RE67184 |RE70563 |RE05756 |LD16783 |RE69485 |EP02912 |EK129639 |CK01556 |EK099302 |EK068037 |EK177163 |EK195351 |RE09463 |RE35309 |RE02552 |RE42385 CDNA|LD16783 AFFY|153889_at DT|20031201 TRREC { NAM|CG3038-RB SYN|FlyBase:FBtr0070107 |FlyBase:FBpp0070102 |GB_protein:AAN09009.1 AANAM|CG3038-PB SQLEN|1627 (-) AALEN|358 BLOC|complement(100872..102168,102234..102400,102502..102664) CDS|complement(101264..102168,102234..102400,102502..102503) CMT|protein_id=AAN09009 DT|20020617 } TRREC { NAM|CG3038-RA SYN|FlyBase:FBtr0070108 |FlyBase:FBpp0070103 |GB_protein:AAF45486.2 |FlyBase:FBgn0075819 |FlyBase Annotation IDs:GA15802 |Dpse\GA15802 AANAM|CG3038-PA SQLEN|1719 (-) AALEN|388 BLOC|complement(100872..102168,102234..102655) CDS|complement(101264..102168,102234..102492) CMT|protein_id=AAF45486 |comment=Range of putative ortholog from tblastn was extended |to cover the gene prediction DT|20020617 } EVD { PRG|blastx_masked DB|aa_SPTR.othinv CLA|protein DT|20041008 DBX|Q9NDQ5 BLOC|complement(101552..102013) DBX|Q7PYT4 BLOC|complement(101519..102166) DBX|Q7PYM6 BLOC|complement(101264..102172) } EVD { PRG|sim4 DB|na_gadfly.dros.RELEASE2 CLA|mRNA DT|20041008 DBX|CT10170.2 BLOC|complement(101261..102156,102234..102644) } EVD { PRG|genie_masked DB|dummy CLA|genie_masked DT|20041008 BLOC|complement(101261..102082) } EVD { PRG|dmel_r3_to_dmel_r4_migration DB|dmel_r3_affy_oligos CLA|oligonucleotide DT|20050125 DBX|153889_at_1521 BLOC|complement(101035..101059) DBX|153889_at_1471 BLOC|complement(101085..101109) DBX|153889_at_1418 BLOC|complement(101138..101162) DBX|153889_at_1417 BLOC|complement(101139..101163) DBX|153889_at_1355 BLOC|complement(101201..101225) DBX|153889_at_1347 BLOC|complement(101209..101233) DBX|153889_at_1332 BLOC|complement(101224..101248) DBX|153889_at_1299 BLOC|complement(101257..101281) DBX|153889_at_1241 BLOC|complement(101315..101339) DBX|153889_at_1213 BLOC|complement(101343..101367) DBX|153889_at_1190 BLOC|complement(101366..101390) DBX|153889_at_1176 BLOC|complement(101380..101404) DBX|153889_at_1127 BLOC|complement(101429..101453) } EVD { PRG|tblastxwrap_masked DB|na_scf_chunk_agambiae.fa CLA|DNA DT|20041008 DBX|AAAB01008987.1p23 BLOC|complement(101309..101605) DBX|AAAB01008960.1p132 BLOC|complement(101540..101740) DBX|AAAB01008987.1p23 BLOC|complement(101609..101779) DBX|AAAB01008987.1p23 BLOC|complement(101897..102172) } EVD { PRG|sim4 DB|na_dbEST.same.dmel CLA|EST DBX|RE53647.5prime BLOC|complement(101983..102168,102234..102655) DBX|RE67184.5prime BLOC|complement(101912..102168,102234..102655) DBX|RE70563.5prime BLOC|complement(101930..102168,102234..102655) DBX|RE05756.5prime BLOC|complement(102110..102168,102234..102641) DBX|LD16783:contig2 BLOC|complement(100889..101414) DBX|LD16783:contig1 BLOC|complement(101983..102168,102234..102629) DBX|RE69485.5prime BLOC|complement(101912..102168,102234..102612) DBX|RE09463.5prime BLOC|complement(101915..102168,102234..102400,102502..102664) DBX|RE35309.5prime BLOC|complement(101934..102168,102234..102656) DBX|RE02552.5prime BLOC|complement(102048..102168,102234..102655) DBX|RE42385.5prime BLOC|complement(101994..102168,102234..102655) } EVD { PRG|sim4 DB|na_transcript.dmel.RELEASE32 CLA|mRNA DT|20041008 DBX|CG3038-RA.32 BLOC|complement(100872..102168,102234..102655) DBX|CG3038-RB.32 BLOC|complement(100872..102168,102234..102400,102502..102664) } EVD { PRG|sim4 DB|na_transcript.dmel.RELEASE31 CLA|mRNA DT|20041008 DBX|CG3038-RA.31 BLOC|complement(100872..102168,102234..102655) DBX|CG3038-RB.31 BLOC|complement(100872..102168,102234..102400,102502..102664) } EVD { PRG|genscan_masked DB|dummy CLA|genscan_masked DT|20041008 BLOC|complement(101261..102156,102234..102492) } EVD { PRG|sim4tandem DB|na_gb.dmel CLA|so DT|20050823 DBX|AY312655 BLOC|complement(101264..102157) DBX|AY312654 BLOC|complement(101264..102157) DBX|AY312653 BLOC|complement(101264..102157) DBX|AY312652 BLOC|complement(101264..102157) DBX|AY312651 BLOC|complement(101264..102157) DBX|AY312650 BLOC|complement(101264..102157) DBX|AY312649 BLOC|complement(101264..102157) DBX|AY312648 BLOC|complement(101264..102157) DBX|AY312647 BLOC|complement(101264..102157) DBX|AY312646 BLOC|complement(101264..102157) DBX|AY312645 BLOC|complement(101264..102157) DBX|AY312644 BLOC|complement(101264..102157) DBX|AY312643 BLOC|complement(101264..102157) DBX|AY312642 BLOC|complement(101264..102157) DBX|AY312662 BLOC|complement(101270..102157) DBX|AY312663 BLOC|complement(101270..102157) DBX|AY312664 BLOC|complement(101270..102157) DBX|AY312665 BLOC|complement(101270..102157) DBX|LD16783 BLOC|complement(100892..102168,102234..102629) DBX|AY312661 BLOC|complement(101264..102157) DBX|AY312660 BLOC|complement(101264..102157) DBX|AY312659 BLOC|complement(101264..102157) DBX|AY312658 BLOC|complement(101264..102157) DBX|AY312657 BLOC|complement(101264..102157) DBX|AY312656 BLOC|complement(101264..102157) } EVD { PRG|blastx_masked DB|aa_SPTR.insect CLA|protein DT|20041008 DBX|AAQ67484 BLOC|complement(101270..102157) DBX|AAQ67483 BLOC|complement(101300..102157) DBX|AAQ67482 BLOC|complement(101306..102157) } EVD { PRG|blastx_masked DB|aa_SPTR.rodent CLA|protein DT|20041008 DBX|Q9JI67 BLOC|complement(101492..102166) DBX|Q91V18 BLOC|complement(101504..102166) DBX|Q9Z222 BLOC|complement(101504..102166) } EVD { PRG|augustus DB|dummy CLA|augustus DT|20050713 BLOC|complement(101261..101277,101353..102082) } EVD { PRG|blastx_masked DB|aa_SPTR.othvert CLA|protein DT|20041008 DBX|Q9N294 BLOC|complement(101483..102166) DBX|Q9N295 BLOC|complement(101483..102166) DBX|Q9N292 BLOC|complement(101483..102166) } EVD { PRG|tblastxwrap_masked DB|na_baylorf1_scfchunk.dpse CLA|so DT|20041008 DBX|Contig2341_Contig3968-3 BLOC|complement(101564..101728) DBX|Contig1859_Contig703-1 BLOC|complement(101894..102061) DBX|Contig2341_Contig3968-3 BLOC|complement(101864..102169) DBX|Contig2137_Contig7031-1 BLOC|complement(101264..102178) DBX|Contig2137_Contig7031-1 BLOC|complement(102391..102495) } EVD { PRG|sim4 DB|na_dbEST.diff.dmel CLA|EST DBX|EP02912.3prime BLOC|complement(101925..102168,102234..102430) DBX|EK129639.5prime BLOC|complement(101977..102168,102234..102485) DBX|CK01556:contig2 BLOC|complement(100872..101494) DBX|CK01556:contig1 BLOC|complement(102104..102168,102234..102644) DBX|EK099302.5prime BLOC|complement(101995..102168,102234..102400,102502..102545) DBX|EK068037.5prime BLOC|complement(101744..101831,101919..102168,102234..102400,102502..102545) DBX|EK177163.5prime BLOC|complement(102107..102168,102234..102626) DBX|EK195351.5prime BLOC|complement(101383..101792) } EVD { PRG|blastx_masked DB|aa_SPTR.dmel CLA|protein DT|20041008 DBX|Q9V394 BLOC|complement(101264..102199,102220..102492) DBX|Q95RP8 BLOC|complement(101264..102172,102235..102492) DBX|Q9VDC5 BLOC|complement(101726..101839) DBX|Q8ML02 BLOC|complement(101516..101821,101825..102076) DBX|AAQ67464 BLOC|complement(101264..102157) DBX|AAQ67458 BLOC|complement(101264..102157) DBX|AAQ67470 BLOC|complement(101264..102157) DBX|AAQ67463 BLOC|complement(101264..102157) DBX|AAQ67475 BLOC|complement(101264..102157) DBX|AAQ67474 BLOC|complement(101264..102157) DBX|AAQ67469 BLOC|complement(101264..102157) DBX|AAQ67468 BLOC|complement(101264..102157) DBX|AAQ67473 BLOC|complement(101264..102157) DBX|AAQ67456 BLOC|complement(101264..102157) DBX|AAQ67467 BLOC|complement(101264..102157) DBX|AAQ67466 BLOC|complement(101264..102157) DBX|AAQ67465 BLOC|complement(101264..102157) DBX|AAQ67462 BLOC|complement(101264..102157) DBX|AAQ67461 BLOC|complement(101264..102157) DBX|AAQ67460 BLOC|complement(101264..102157) DBX|AAQ67459 BLOC|complement(101264..102157) DBX|AAQ67457 BLOC|complement(101264..102157) DBX|AAQ67472 BLOC|complement(101264..102157) DBX|AAQ67471 BLOC|complement(101264..102157) DBX|AAQ67477 BLOC|complement(101270..102157) DBX|AAQ67479 BLOC|complement(101270..102157) DBX|AAQ67478 BLOC|complement(101270..102157) DBX|AAQ67476 BLOC|complement(101270..102157) DBX|Q8SZS9 BLOC|complement(101522..102163) DBX|Q9VLS8 BLOC|complement(101480..102175) DBX|Q24157 BLOC|complement(101522..102178) DBX|Q9W4N0 BLOC|complement(101522..102178) DBX|Q9VLT0 BLOC|complement(101480..102181) DBX|Q9VZA6 BLOC|complement(101531..102184) DBX|Q8IRZ0 BLOC|complement(101264..102172,102235..102399) } EVD { PRG|blastx_masked DB|aa_SPTR.worm CLA|protein DT|20041008 DBX|O17750 BLOC|complement(101546..102151) DBX|O62115 BLOC|complement(101540..102166) DBX|Q8MQG4 BLOC|complement(101546..102181) } EVD { PRG|blastx_masked DB|aa_SPTR.primate CLA|protein DT|20041008 DBX|Q9Y2C3 BLOC|complement(101483..102166) DBX|AAR08910 BLOC|complement(101483..102166) DBX|Q9NY97 BLOC|complement(101504..102166) } VERS|4.3 } # EOR GADR { RETE|ID 1 FBan0003923 GID 1 FBgn0001337 GSYM 1 Exp6 CGSYM 1 CG3923 ARM 1 X CLOC 1 1B4-1B4 SCAF 1 AE003417 TRREC 1 AALEN 1 1047 ID|FBan0003923 SYM|CG3923 GENSR { GSYM|Exp6 ID|FBgn0001337 } ARM|X SCAF|AE003417 BLOC|complement(327874..333414) CLOCC|1B4-1B4 SQLEN|5541 GO|nuclear pore ; GO:0005643 |protein transporter activity ; GO:0008565 |cytoplasm ; GO:0005737 |protein import into nucleus, docking ; GO:0000059 ID2|FBan0003923 |FBgn0067912 |FBgn0023538 SYN|l(1)G4 |l(1)C84 |EC4 |Exp1 |l(1)1Bb |l(1)Bb |EG:165H7.3 |l(1)EC4 EST|RE74323 |EK067814 |RE72641 |EK213624 |RE69110 |EK056823 |RE69043 |EK212635 |RE69231 |EK170324 |EK267652 |EK084960 |EP04210 |SD16001 |EK056254 |SD16118 |UT01951 |SD03282 |EK196818 |EK296042 |EK109820 |EC14217 |EK178848 |EK230164 |EK217750 |AT05717 |EK023551 |EK256661 |SD05765 |LP07264 |LD16745 |LD16701 |LD14543 |RE46945 |RE42942 |RE40711 |RE38140 |RE26089 |RE06077 |RE28010 |RE11735 CDNA|SD03282 AFFY|143211_at DT|20031201 TRREC { NAM|Exp6-RA SYN|FlyBase:FBtr0070098 |FlyBase Annotation IDs:CG3923-RA |FlyBase:FBpp0070093 |FlyBase Annotation IDs:CG3923-PA |GB_protein:AAF45504.2 |FlyBase:FBgn0077786 |FlyBase Annotation IDs:GA17777 |Dpse\GA17777 AANAM|Exp6-PA SQLEN|4122 (-) AALEN|1047 BLOC|complement(327874..328733,328948..329383,329464..329673,329742..329911, |329978..330527,330586..331022,331132..331328,331520..331902,331980..332135, |332591..333114,333216..333414) CDS|complement(328659..328733,328948..329383,329464..329673,329742..329911, |329978..330527,330586..331022,331132..331328,331520..331902,331980..332135, |332591..333114,333216..333218) CMT|protein_id=AAF45504 |comment=Range of putative ortholog from tblastn was extended |to cover the gene prediction DT|20020716 } EVD { PRG|sim4 DB|na_transcript.dmel.RELEASE31 CLA|mRNA DT|20041008 DBX|CG3923-RA.31 BLOC|complement(327874..328733,328948..329383,329464..329673,329742..329911, |329978..330527,330586..331022,331132..331328,331520..331902,331980..332135, |332591..333114,333216..333414) } EVD { PRG|sim4tandem DB|na_gb.dmel CLA|cDNA DT|20050823 DBX|SD03282 BLOC|complement(327875..328733,328948..329383,329464..329673,329742..329911, |329978..330527,330586..331022,331132..331328,331520..331902,331980..332135, |332591..333114,333216..333369) } EVD { PRG|genscan_masked DB|dummy CLA|genscan_masked DT|20041008 BLOC|complement(328656..328754,328948..329383,329464..329673,329742..329911, |329978..330527,330586..331022,331132..331328,331520..331902,331980..332135, |332591..333114,334545..334738,335030..335251,335421..335574,336568..336719, |337082..337269,337735..337991,338051..338334,338424..338436,339056..339248, |339710..339867,340090..340650,340706..341068,341132..341787,341850..344225, |344287..344302) } EVD { PRG|sim4 DB|na_gadfly.dros.RELEASE2 CLA|mRNA DT|20041008 DBX|CT13059.2 BLOC|complement(328656..328733,328948..329383,329464..329673,329742..329911, |329978..330527,330586..331022,331132..331328,332591..333114,333216..333369) } EVD { PRG|blastx_masked DB|aa_SPTR.insect CLA|protein DT|20041008 DBX|Q9GRD6 BLOC|complement(331698..331901) DBX|Q9GRD5 BLOC|complement(331698..331901) DBX|Q9GRD4 BLOC|complement(331716..331901) DBX|Q9GRD3 BLOC|complement(332689..333057) DBX|Q9GRD2 BLOC|complement(332689..333057) DBX|Q9GRD1 BLOC|complement(332689..333057) } EVD { PRG|blastx_masked DB|aa_SPTR.rodent CLA|protein DT|20041008 DBX|Q80ZJ1 BLOC|complement(330054..330320) DBX|AAH58090 BLOC|complement(328933..329394,329478..329645,330110..330376,330759..331013, |331132..331317,331527..331646,331851..331955,332605..333108) DBX|Q924Z6 BLOC|complement(328933..329394,329478..329645,330110..330376,330759..331013, |331132..331317,331536..331646,331851..331955,332605..333108) } EVD { PRG|genie_masked DB|dummy CLA|genie_masked DT|20041008 BLOC|complement(328656..328733,328948..329383,329464..329673,329742..329911, |329978..330527,330586..331022,331132..331328,331520..331902,331980..332135, |332591..333164,333235..333313) } EVD { PRG|augustus DB|dummy CLA|augustus DT|20050713 BLOC|complement(328656..328733,328948..329383,329464..329673,329742..329911, |329978..330527,330586..331022,331132..331328,331520..331902,331980..332135, |332591..333114,333216..333218) } EVD { PRG|blastx_masked DB|aa_SPTR.othvert CLA|protein DT|20041008 DBX|Q803Z3 BLOC|complement(329472..329678,329741..329833,330119..330409,330759..331013, |331132..331287,331494..331646,331746..331925,332608..333108) DBX|Q8QHJ8 BLOC|complement(329472..329645,329741..329932,330119..330409,330759..331013, |331132..331287,331494..331646,331746..331925,332608..333108) } EVD { PRG|tblastxwrap_masked DB|na_baylorf1_scfchunk.dpse CLA|so DT|20041008 DBX|Contig7446_Contig2444-16 BLOC|complement(331512..331961) DBX|Contig7446_Contig2444-16 BLOC|complement(331973..332203) DBX|Contig7446_Contig2444-16 BLOC|complement(332590..332808) DBX|Contig7446_Contig2444-16 BLOC|complement(332821..332952) DBX|Contig7446_Contig2444-16 BLOC|complement(332914..333144) DBX|Contig7446_Contig2444-16 BLOC|complement(328662..328742) DBX|Contig7446_Contig2444-16 BLOC|complement(328940..329068) DBX|Contig7446_Contig2444-16 BLOC|complement(328942..329349) DBX|Contig7446_Contig2444-16 BLOC|complement(329311..329388) DBX|Contig7446_Contig2444-16 BLOC|complement(329463..329693) DBX|Contig7446_Contig2444-16 BLOC|complement(329741..329914) DBX|Contig7446_Contig2444-16 BLOC|complement(329975..330535) DBX|Contig7446_Contig2444-16 BLOC|complement(330642..331025) DBX|Contig7446_Contig2444-16 BLOC|complement(331120..331341) } EVD { PRG|blastx_masked DB|aa_SPTR.dmel CLA|protein DT|20041008 DBX|Q9W322 BLOC|complement(331628..331699) DBX|Q9W5G1 BLOC|complement(328659..328733,328948..329409,329466..329711,329741..329917, |329978..330526,330585..331022,331105..331329,331521..331904,331982..332143, |332593..333114) DBX|Q8T9F5 BLOC|complement(328659..328733,328948..329409,329466..329711,329741..329917, |329978..330526,330585..331022,331105..331329,331521..331904,331982..332143, |332593..333114) DBX|O46055 BLOC|complement(328659..328733,328948..329409,329466..329711,329741..329917, |329978..330526,330585..331022,331105..331329,331521..331904,331982..332143, |332593..333057,333218..333313) } EVD { PRG|sim4 DB|na_dbEST.diff.dmel CLA|EST DBX|EK067814.5prime BLOC|complement(328982..329383,329464..329534) DBX|EK213624.5prime BLOC|complement(328982..329383,329464..329534) DBX|EK056823.5prime BLOC|complement(328070..328592) DBX|EK212635.5prime BLOC|complement(328486..328732) DBX|EK170324.5prime BLOC|complement(328577..328733) DBX|EK267652.5prime BLOC|complement(328113..328733,328948..328979) DBX|EK084960.5prime BLOC|complement(328370..328752) DBX|EP04210.3prime BLOC|complement(327980..328215) DBX|SD16001.5prime BLOC|complement(332690..333114,333216..333352) DBX|EK056254.5prime BLOC|complement(328362..328733,328948..328979) DBX|SD16118.5prime BLOC|complement(332699..333377) DBX|UT01951:contig2 BLOC|complement(328499..328733,328948..329354) DBX|UT01951:contig1 BLOC|complement(330485..330527,330586..331022,331132..331328,331520..331572) DBX|SD03282:contig2 BLOC|complement(327875..328260) DBX|SD03282:contig1 BLOC|complement(332691..333114,333216..333369) DBX|EK196818.5prime BLOC|complement(328254..328662) DBX|EK296042.5prime BLOC|complement(328218..328433) DBX|EK109820.5prime BLOC|complement(328651..328733,328948..329389) DBX|EC14217.5prime BLOC|complement(328543..328733,328948..329134) DBX|EK178848.5prime BLOC|complement(328052..328500) DBX|EK230164.5prime BLOC|complement(328442..328592) DBX|EK217750.5prime BLOC|complement(328227..328732) DBX|AT05717.3prime BLOC|complement(328499..328733,328948..329195) DBX|EK023551.5prime BLOC|complement(330880..331040,331132..331332) DBX|EK256661.5prime BLOC|complement(331736..331902,331980..332135,332591..332759) DBX|SD05765.5prime BLOC|complement(332676..333114,333216..333369) } EVD { PRG|dmel_r3_to_dmel_r4_migration DB|dmel_r3_affy_oligos CLA|oligonucleotide DT|20050125 DBX|143211_at_2224 BLOC|complement(329470..329494) DBX|143211_at_2136 BLOC|complement(329558..329582) DBX|143211_at_2698 BLOC|complement(328702..328726) DBX|143211_at_2659 BLOC|complement(328955..328979) DBX|143211_at_2593 BLOC|complement(329021..329045) DBX|143211_at_2559 BLOC|complement(329055..329079) DBX|143211_at_2529 BLOC|complement(329085..329109) DBX|143211_at_2461 BLOC|complement(329153..329177) DBX|143211_at_2437 BLOC|complement(329177..329201) DBX|143211_at_2334 BLOC|complement(329280..329304) DBX|143211_at_2316 BLOC|complement(329298..329322) DBX|143211_at_2295 BLOC|complement(329319..329343) DBX|143211_at_2272 BLOC|complement(329342..329366) DBX|143211_at_2264 BLOC|complement(329350..329374) } EVD { PRG|blastx_masked DB|aa_SPTR.primate CLA|protein DT|20041008 DBX|Q96CP8 BLOC|complement(328933..329394,329478..329645,330110..330376,330759..331013, |331132..331317,331527..331646) DBX|BAA20825 BLOC|complement(328933..329394,329478..329645,330110..330376,330759..331013, |331132..331317,331527..331646,331851..331910,332605..333108) DBX|Q96QU8 BLOC|complement(328933..329394,329478..329645,330110..330376,330759..331013, |331132..331317,331527..331646,331851..331910,332605..333108) } EVD { PRG|sim4 DB|na_dbEST.same.dmel CLA|EST DBX|RE74323.5prime BLOC|complement(332607..333114,333216..333396) DBX|RE72641.5prime BLOC|complement(332780..333114,333216..333396) DBX|RE69110.5prime BLOC|complement(332109..332135,332591..333114,333216..333396) DBX|RE69043.5prime BLOC|complement(332735..333114,333216..333396) DBX|RE69231.5prime BLOC|complement(332804..333114,333216..333414) DBX|LP07264.5prime BLOC|complement(332097..332135,332591..333114,333216..333304) DBX|LD16745.5prime BLOC|complement(332997..333114,333216..333327) DBX|LD16701.5prime BLOC|complement(332731..333114,333216..333327) DBX|LD14543.5prime BLOC|complement(332623..333114,333216..333345) DBX|RE46945.5prime BLOC|complement(332707..333114,333216..333351) DBX|RE42942.5prime BLOC|complement(332655..333114,333216..333381) DBX|RE40711.5prime BLOC|complement(332692..333114,333216..333381) DBX|RE38140.5prime BLOC|complement(332806..333114,333216..333381) DBX|RE26089.5prime BLOC|complement(332652..333114,333216..333381) DBX|RE06077.5prime BLOC|complement(332865..333114,333216..333381) DBX|RE28010.5prime BLOC|complement(332762..333114,333216..333384) DBX|RE11735.5prime BLOC|complement(332790..333114,333216..333392) } EVD { PRG|sim4 DB|na_transcript.dmel.RELEASE32 CLA|mRNA DT|20041008 DBX|CG3923-RA.32 BLOC|complement(327874..328733,328948..329383,329464..329673,329742..329911, |329978..330527,330586..331022,331132..331328,331520..331902,331980..332135, |332591..333114,333216..333414) } VERS|4.3 } # EOR GADR { RETE|ID 1 FBan0032816 GID 1 FBgn0052816 GSYM 1 CG32816 CGSYM 1 CG32816 ARM 1 X CLOC 1 1A2-1A3 SCAF 1 AE003417 TRREC 2 AALEN 2 378 ID|FBan0032816 SYM|CG32816 GENSR { GSYM|CG32816 ID|FBgn0052816 } ARM|X SCAF|AE003417 BLOC|complement(173843..191621) CLOCC|1A2-1A3 SQLEN|17779 ID2|FBan0032816 EST|EK106333 |EP03229 |EK266538 |EK273563 |EK248720 |EK176827 |EK177535 |RH59068 |EK288306 |RH21808 |EK042803 |RH37124 |EP16753 |RE74471 |EP15403 |EK166814 |RE38575 |EK104513 |EK251021 |RE38475 |EK135764 CMT|comment=Transposon inserted in intron DT|20031201 TRREC { NAM|CG32816-RA SYN|FlyBase:FBtr0070102 |FlyBase:FBpp0070097 |GB_protein:AAN09011.1 AANAM|CG32816-PA SQLEN|1372 (-) AALEN|378 BLOC|complement(173843..174750,190387..190719,191489..191619) CDS|complement(173846..174750,190387..190615) CMT|validation_flag=transposon in gene |protein_id=AAN09011 DT|20020618 } TRREC { NAM|CG32816-RB SYN|FlyBase:FBtr0070101 |FlyBase:FBpp0070096 |GB_protein:AAN09012.1 |FlyBase:FBgn0077175 |FlyBase Annotation IDs:GA17161 |Dpse\GA17161 AANAM|CG32816-PB SQLEN|1358 (-) AALEN|378 BLOC|complement(173843..174750,190387..190703,191489..191621) CDS|complement(173846..174750,190387..190615) CMT|protein_id=AAN09012 |validation_flag=transposon in gene |comment=Range of putative ortholog from tblastn was extended |to cover the gene prediction DT|20020618 } EVD { PRG|sim4 DB|na_transcript.dmel.RELEASE31 CLA|mRNA DT|20041008 DBX|CG32816-RA.31 BLOC|complement(173843..174750,190387..190719,191489..191619) DBX|CG32816-RB.31 BLOC|complement(173843..174750,190387..190703,191489..191621) } EVD { PRG|genscan_masked DB|dummy CLA|genscan_masked DT|20041008 BLOC|complement(186197..186298,191489..191669,192085..192176,193916..193957) BLOC|complement(173843..174724) } EVD { PRG|repeatmasker DB|dummy CLA|RepeatMasker:dummy DT|20041008 DBX|U66884 BLOC|complement(182528..182646) } EVD { PRG|tblastxwrap_masked DB|na_baylorf1_scfchunk.dpse CLA|so DT|20041008 DBX|Contig7446_Contig2444-15 BLOC|complement(173957..174466) DBX|Contig7446_Contig2444-15 BLOC|complement(174428..174514) DBX|Contig7446_Contig2444-15 BLOC|complement(174629..174748) } EVD { PRG|blastx_masked DB|aa_SPTR.dmel CLA|protein DT|20041008 DBX|Q9VWG5 BLOC|complement(185583..185624) DBX|Q8IRY9 BLOC|complement(173846..174754,190379..190615) } EVD { PRG|sim4 DB|na_dbEST.diff.dmel CLA|EST DBX|EK106333.5prime BLOC|complement(175036..175522) DBX|EP03229.3prime BLOC|complement(173735..174187) DBX|EK266538.5prime BLOC|complement(179981..180386) DBX|EK273563.5prime BLOC|complement(173614..174047) DBX|EK248720.5prime BLOC|complement(174175..174635) DBX|EK176827.5prime BLOC|complement(173549..173984) DBX|EK177535.5prime BLOC|complement(175076..175522) DBX|EK288306.5prime BLOC|complement(179460..179665) DBX|EK042803.5prime BLOC|complement(174650..174750,275299..275334,284860..285073) DBX|EP16753.3prime BLOC|complement(174479..174900) DBX|EP15403.3prime BLOC|complement(174454..174750,275299..275334,327227..327459) DBX|EK166814.5prime BLOC|complement(173896..174353) DBX|EK104513.5prime BLOC|complement(190411..190719,191489..191620) DBX|EK251021.5prime BLOC|complement(179532..179972) DBX|EK135764.5prime BLOC|complement(174458..174750,190387..190550) } EVD { PRG|tblastxwrap_masked DB|na_scf_chunk_agambiae.fa CLA|DNA DT|20041008 DBX|AAAB01008963.1p3 BLOC|complement(174026..174214) } EVD { PRG|promoter DB|dummy CLA|promoter DT|20041008 BLOC|complement(175419..175420) BLOC|complement(180187..180188) BLOC|complement(182097..182098) BLOC|complement(188025..188026) } EVD { PRG|sim4 DB|na_dbEST.same.dmel CLA|EST DBX|RH59068.5prime BLOC|complement(173900..174438) DBX|RH21808.5prime BLOC|complement(173901..174438) DBX|RH37124.5prime BLOC|complement(173900..174438) DBX|RE74471.5prime BLOC|complement(174530..174750,190387..190719,191489..191619) DBX|RE38575.5prime BLOC|complement(174643..174750,190387..190703,191489..191621) DBX|RE38475.5prime BLOC|complement(174701..174750,190387..190703,191489..191621) } EVD { PRG|sim4 DB|na_transcript.dmel.RELEASE32 CLA|mRNA DT|20041008 DBX|CG32816-RA.32 BLOC|complement(173843..174750,190387..190719,191489..191619) DBX|CG32816-RB.32 BLOC|complement(173843..174750,190387..190703,191489..191621) } VERS|4.3 } # EOR GADR { RETE|ID 1 FBan0003972 GID 1 FBgn0010019 GSYM 1 Cyp4g1 CGSYM 1 CG3972 ARM 1 X CLOC 1 1B4-1B4 SCAF 1 AE003417 TRREC 1 AALEN 1 556 ID|FBan0003972 SYM|CG3972 GENSR { GSYM|Cyp4g1 ID|FBgn0010019 } ARM|X SCAF|AE003417 BLOC|complement(323871..326155) CLOCC|1B4-1B4 SQLEN|2285 GO|electron transport ; GO:0006118 |microsome ; GO:0005792 |oxidoreductase activity ; GO:0016491 |monooxygenase activity ; GO:0004497 |electron transporter activity ; GO:0005489 ID2|FBan0003972 |FBgn0023539 |FBgn0011757 SYN|P-450 |P450-A |ASC-T1 |P-450-A |EG:165H7.1 |Cyt-P450-A1 |sc&ggr; EST|GH13561 |GH13284 |GH09563 |GH09418 |GH06488 |GH07650 |GH05014 |GH04644 |GH03653 |GH15604 |GH05773 |GH02806 |LP20640 |GH28328 |GH20504 |RE65407 |RE58530 |RE27566 |RE26628 |EK186242 |EK107554 |EK075334 |EK145051 |EK145050 |EK116009 |GM01484 |EK216445 |GH25249 |GH06604 |GH28448 |GH13137 |GH11942 |GH05567 |GH20633 |GH03064 |GH11938 |GH01123 |GH07216 |GH14353 |GH13651 |GH08932 |GH05611 |GH22216 |GH22070 |GH05839 |GH06263 |GH08514 |GH08593 |GH08157 |GH08141 |LP16908 |GH23140 |GH15982 |GH15917 |GH11207 |GH06534 |GH02673 |GH27571 |GH22108 |GH16696 |GH16462 |GH10223 |GH07595 |GH28732 |GH23894 |GH23673 |GH22195 |GH21873 |GH18703 |GH16105 |GH16091 |GH16021 |GH14860 CDNA|GH05567 AFFY|152015_at CMT|comment=DGC clone GH05567 appears problematic: incomplete CDS |map=1B3-1B4 |description=D.melanogaster FlyBase-curated sequence: Cyp4g1.v002 DT|20031201 TRREC { NAM|Cyp4g1-RA SYN|FlyBase:FBtr0070099 |FlyBase Annotation IDs:CG3972-RA |FlyBase:FBpp0070094 |GB_protein:AAF45503.1 |FlyBase Annotation IDs:CG3972-PA |FlyBase:FBgn0077822 |FlyBase Annotation IDs:GA17813 |Dpse\GA17813 AANAM|Cyp4g1-PA SQLEN|2285 (-) AALEN|556 BLOC|complement(323871..326155) CDS|complement(324383..326050) CMT|evidence=experimental |protein_id=AAF45503 |comment=Range of putative ortholog from tblastn was extended |to cover the gene prediction DT|20020716 } CLNSR { CLA|point_mutation NAM|Cyp4g1[v2] BLOC|complement(325681..325681) CMT|reported_pr_change=T124A |na_change=A325681G |pr_change=T124A|Cyp4g1-PA |evidence=experimental |comment=Site of nucleotide substitution in mutant inferred by |FlyBase based on reported amino acid change. DT|20060120 } CLNSR { CLA|point_mutation NAM|Cyp4g1[v1] BLOC|complement(325788..325788) CMT|na_change=T325788C |comment=Site of nucleotide substitution in mutant inferred by |FlyBase based on reported amino acid change. |evidence=experimental |pr_change=L88P|Cyp4g1-PA |reported_pr_change=L87P DT|20060120 } EVD { PRG|blastx_masked DB|aa_SPTR.othinv CLA|protein DT|20041008 DBX|Q7QAX2 BLOC|complement(324398..325924) DBX|Q7Q4T7 BLOC|complement(324401..325099,325217..325948) DBX|Q7QC26 BLOC|complement(324395..325954) } EVD { PRG|sim4 DB|na_gadfly.dros.RELEASE2 CLA|mRNA DT|20041008 DBX|CT13187.2 BLOC|complement(324148..326138) } EVD { PRG|genie_masked DB|dummy CLA|genie_masked DT|20041008 BLOC|complement(324380..326050) } EVD { PRG|dmel_r3_to_dmel_r4_migration DB|dmel_r3_affy_oligos CLA|oligonucleotide DT|20050125 DBX|152015_at_2225 BLOC|complement(323902..323926) DBX|152015_at_2084 BLOC|complement(324043..324067) DBX|152015_at_2074 BLOC|complement(324053..324077) DBX|152015_at_2027 BLOC|complement(324100..324124) DBX|152015_at_2007 BLOC|complement(324120..324144) DBX|152015_at_1930 BLOC|complement(324197..324221) DBX|152015_at_1911 BLOC|complement(324216..324240) DBX|152015_at_1869 BLOC|complement(324258..324282) DBX|152015_at_1851 BLOC|complement(324276..324300) DBX|152015_at_1832 BLOC|complement(324295..324319) DBX|152015_at_1817 BLOC|complement(324310..324334) DBX|152015_at_1776 BLOC|complement(324351..324375) DBX|152015_at_1707 BLOC|complement(324420..324444) DBX|152015_at_1679 BLOC|complement(324448..324472) } EVD { PRG|tblastx_masked DB|na_dbEST.insect CLA|EST DBX|BX604540 BLOC|complement(324398..325015) DBX|BX619485 BLOC|complement(324437..325024) DBX|BX628097 BLOC|complement(324398..325027) } EVD { PRG|tblastxwrap_masked DB|na_scf_chunk_agambiae.fa CLA|DNA DT|20041008 DBX|AAAB01008799.1p16 BLOC|complement(324386..324661) DBX|AAAB01008984.1p106 BLOC|complement(324398..324664) DBX|AAAB01008849.1p16 BLOC|complement(324401..324724) DBX|AAAB01008944.1p6 BLOC|complement(324401..324727) DBX|AAAB01008530.1p2 BLOC|complement(324401..324727) DBX|AAAB01008846.1p82 BLOC|complement(324401..324730) DBX|AAAB01008960.1p117 BLOC|complement(324401..324736) DBX|AAAB01008859.1p31 BLOC|complement(324497..324829) DBX|AAAB01008885.1p1 BLOC|complement(324527..324865) DBX|AAAB01008963.1p17 BLOC|complement(324551..324865) DBX|AAAB01008963.1p17 BLOC|complement(325202..325363) DBX|AAAB01008885.1p1 BLOC|complement(325130..325432) DBX|AAAB01008885.1p1 BLOC|complement(325436..325624) DBX|AAAB01008964.1p25 BLOC|complement(325487..325678) DBX|AAAB01008987.1p48 BLOC|complement(325490..325678) DBX|AAAB01008846.1p100 BLOC|complement(325493..325678) DBX|AAAB01008846.1p100 BLOC|complement(325493..325678) DBX|AAAB01008846.1p82 BLOC|complement(325490..325705) DBX|AAAB01008859.1p106 BLOC|complement(325493..325783) DBX|AAAB01008885.1p1 BLOC|complement(325610..325783) DBX|AAAB01008960.1p117 BLOC|complement(325475..325939) DBX|AAAB01008963.1p17 BLOC|complement(325367..325948) } EVD { PRG|sim4 DB|na_dbEST.same.dmel CLA|EST DBX|GH13561.5prime BLOC|complement(325513..326138) DBX|GH13284.5prime BLOC|complement(325527..326138) DBX|GH09563.5prime BLOC|complement(325553..326138) DBX|GH09418.5prime BLOC|complement(325549..326138) DBX|GH06488.5prime BLOC|complement(325576..326138) DBX|GH07650.5prime BLOC|complement(325582..326138) DBX|GH05014.5prime BLOC|complement(325544..326138) DBX|GH04644.5prime BLOC|complement(325519..326138) DBX|GH03653.5prime BLOC|complement(325795..326138) DBX|GH15604.5prime BLOC|complement(325580..326140) DBX|GH05773.5prime BLOC|complement(325586..326140) DBX|GH02806.5prime BLOC|complement(325586..326140) DBX|LP20640.5prime BLOC|complement(325528..326141) DBX|GH28328.5prime BLOC|complement(325461..326141) DBX|GH20504.5prime BLOC|complement(325500..326141) DBX|RE65407.5prime BLOC|complement(325586..326153) DBX|RE58530.5prime BLOC|complement(325799..326155) DBX|RE27566.5prime BLOC|complement(325652..326155) DBX|RE26628.5prime BLOC|complement(325688..326155) DBX|GH25249.3prime BLOC|complement(323873..324380) DBX|GH06604.3prime BLOC|complement(323867..324484) DBX|GH28448.5prime BLOC|complement(324148..324758) DBX|GH13137.5prime BLOC|complement(324326..324953) DBX|GH11942.5prime BLOC|complement(324615..325240) DBX|GH05567:contig1 BLOC|complement(324800..325365) DBX|GH05567:contig2 BLOC|complement(323873..324491) DBX|GH20633.5prime BLOC|complement(325094..325723) DBX|GH03064.5prime BLOC|complement(325452..326013) DBX|GH11938.5prime BLOC|complement(325680..326069) DBX|GH01123.5prime BLOC|complement(325539..326097) DBX|GH07216.5prime BLOC|complement(325513..326115) DBX|GH14353.5prime BLOC|complement(325513..326120) DBX|GH13651.5prime BLOC|complement(325553..326120) DBX|GH08932.5prime BLOC|complement(325541..326120) DBX|GH05611.5prime BLOC|complement(325477..326120) DBX|GH22216.5prime BLOC|complement(325487..326122) DBX|GH22070.5prime BLOC|complement(325440..326122) DBX|GH05839.5prime BLOC|complement(325502..326122) DBX|GH06263.5prime BLOC|complement(325502..326122) DBX|GH08514.5prime BLOC|complement(325445..326127) DBX|GH08593.5prime BLOC|complement(325553..326128) DBX|GH08157.5prime BLOC|complement(325516..326128) DBX|GH08141.5prime BLOC|complement(325540..326128) DBX|LP16908.5prime BLOC|complement(325423..326132) DBX|GH23140.5prime BLOC|complement(325416..326133) DBX|GH15982.5prime BLOC|complement(325587..326133) DBX|GH15917.5prime BLOC|complement(325518..326134) DBX|GH11207.5prime BLOC|complement(325514..326134) DBX|GH06534.5prime BLOC|complement(325553..326134) DBX|GH02673.5prime BLOC|complement(325502..326134) DBX|GH27571.5prime BLOC|complement(325697..326137) DBX|GH22108.5prime BLOC|complement(325463..326137) DBX|GH16696.5prime BLOC|complement(325601..326137) DBX|GH16462.5prime BLOC|complement(325515..326137) DBX|GH10223.5prime BLOC|complement(325579..326137) DBX|GH07595.5prime BLOC|complement(325587..326137) DBX|GH28732.5prime BLOC|complement(325444..326138) DBX|GH23894.5prime BLOC|complement(325839..326138) DBX|GH23673.5prime BLOC|complement(325421..326138) DBX|GH22195.5prime BLOC|complement(325576..326138) DBX|GH21873.5prime BLOC|complement(325516..326138) DBX|GH18703.5prime BLOC|complement(325559..326138) DBX|GH16105.5prime BLOC|complement(325588..326138) DBX|GH16091.5prime BLOC|complement(325579..326138) DBX|GH16021.5prime BLOC|complement(325520..326138) DBX|GH14860.5prime BLOC|complement(325564..326138) } EVD { PRG|prosplign DB|aa_ncbi_other CLA|protein DT|20060124 DBX|AAR26517 BLOC|complement(324398..326023) DBX|AAT08963 BLOC|complement(324398..325006) DBX|AAT08964 BLOC|complement(324398..325006) DBX|AAT08965 BLOC|complement(324551..325006) DBX|AAT08966 BLOC|complement(324551..325006) DBX|AAT08967 BLOC|complement(324551..325006) DBX|AAT08968 BLOC|complement(324551..325006) DBX|AAT08969 BLOC|complement(324551..325006) DBX|AAT0897