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FlyBase Report

nuclear snRNA gene snRNA:U6:96Aa

The nuclear snrna gene small nuclear RNA U6 at 96Aa, abbreviated as snRNA:U6:96Aa, is reported here. 4 DNA entries are available. Functions of the nuclear snrna gene include nuclear mRNA splicing via U2-type spliceosome, and its cell location is snRNP U6. Wild-type functions include this sequence is not in the genome. It is located at 96A7 on the cytological map. There is 1 recorded allele, and 25 references are listed.


Symbol snRNA:U6:96Aa
Class of gene nuclear snRNA gene
Full name small nuclear RNA U6 at 96Aa
Cytogenetic map 96A7  
Limits computationally determined from genome sequence between P{PZ}l(3)0720707207&P{PZ}l(3)0584205842 and P{EP}CycB3EP3127
Notes on cytogenetic map Experimentally determined: 96A
Available reports
Abridged reportSee also  Full report  |   Recent updates  |   Genome Annotation
Alleles (1)  |   Map locations  |   Gene Ontology  |   References (25)  |  
Similar genes & Sequences (5)  |   Synonyms (18)  |   Attributed data (22)
Synonyms  dU6;    K1;    snRNA4;    U6-1;    DU6-1;    U6 RNA;    U6;    U6snRNA;    U6-1 small nuclear RNA;    snRNA-b;    U6-96Aa;    snRNA:U6;    CR31379;    U6snRNA96Aa;    snRNA4;    snRNA6;    small nuclear RNA U6;    small nuclear RNA b
GO:Biological process nuclear mRNA splicing via U2-type spliceosome
GO:Cellular component snRNP U6
Genomic sequence analysis FBan0031379
Nucl. sequences & translations AE003748;    M24605;    M26818;    X06669
FlyBase ID FBgn0004188
Secondary ID FBgn0003455, FBgn0003939, FBgn0003940, FBgn0051379
Date 24 Nov 05
Useful aneuploid aberrations Deficiency: Df(3R)crb87-5 (inferred from cytology);    Duplication: Dp(3;3)M95A+13 (inferred from cytology)
Wild-type function     This sequence is not in the genome, but it is somewhat similar to U6 (82%). Could it just be U6 sequenced badly? E = 0.05 [S. Mount].

Alleles        
SymbolAllele classPhenotype includesMutagenStocksMolec. info.
+----------


 References (listed by author, ID, year)
Primary
  1. Arrigo et al., 1985
  2. Das et al., 1986
  3. Das et al., 1987
  4. Dominski et al., 2003
  5. Garber et al., 1994
  6. Jensen et al., 1998
  1. Jones and Kadonaga, 2000
  2. Matunis et al., 1993
  3. Mount and Salz, 2000
  4. Mount and Steitz, 1981
  5. Saluz et al., 1983
  6. Saluz et al., 1988
  1. Saluz et al., 1988
  2. Spikes and Bingham, 1992
  3. Takada et al., 2000
  4. Wang and Stumph, 1995
  5. Wang and Stumph, 1998
  6. Wooley et al., 1982
Abstract
  1. Harding et al., 2002
Review
  1. Tarn and Steitz, 1997
Other
  1. Das, 1996.12.6
  2. FlyBase Genome Annotators, 2002-2003
  1. FlyBase, 1992-
  2. Mount, 2000.5
  1. Mount, 2000.5.30



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